RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 ZSCAN22P10073 491 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-206ENST00000448745 HSPA4P34932 840 aa10.09□□□□□ -0.79
CPSF7-206ENST00000448745 FAM98CQ17RN3 349 aaKnown RBP10.09□□□□□ -0.79
CPSF7-206ENST00000448745 KRT24Q2M2I5 525 aa10.09□□□□□ -0.79
CPSF7-206ENST00000448745 ZCRB1Q8TBF4 217 aaKnown RBP10.09□□□□□ -0.79
CPSF7-206ENST00000448745 RILPL2Q969X0 211 aa10.09□□□□□ -0.79
CPSF7-206ENST00000448745 GTPBP4Q9BZE4 634 aaKnown RBP10.09□□□□□ -0.79
CPSF7-206ENST00000448745 USP25Q9UHP3 1055 aa10.09□□□□□ -0.79
CPSF7-206ENST00000448745 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-206ENST00000448745 CEMIPQ8WUJ3 1361 aa10.09□□□□□ -0.79
CPSF7-206ENST00000448745 SCN11AQ9UI33 1791 aa10.09□□□□□ -0.79
CPSF7-206ENST00000448745 SOS1Q07889 1333 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-206ENST00000448745 KDM6AO15550 1401 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-206ENST00000448745 MAP3K5Q99683 1374 aa10.08□□□□□ -0.8
CPSF7-206ENST00000448745 KDM4AO75164 1064 aa10.08□□□□□ -0.8
CPSF7-206ENST00000448745 PHKG2P15735 406 aa10.08□□□□□ -0.8
CPSF7-206ENST00000448745 ATP8B2P98198 1209 aa10.08□□□□□ -0.8
CPSF7-206ENST00000448745 ZNF772Q68DY9 489 aaPredicted RBP10.08□□□□□ -0.8
CPSF7-206ENST00000448745 ZNF530Q6P9A1 599 aaPredicted RBP10.08□□□□□ -0.8
CPSF7-206ENST00000448745 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
CPSF7-206ENST00000448745 IL17REQ8NFR9 667 aa10.08□□□□□ -0.8
CPSF7-206ENST00000448745 CDCA7Q9BWT1 371 aaPredicted RBP10.08□□□□□ -0.8
CPSF7-206ENST00000448745 STK31Q9BXU1 1019 aa10.08□□□□□ -0.8
CPSF7-206ENST00000448745 CCDC9Q9Y3X0 531 aaKnown RBP10.08□□□□□ -0.8
CPSF7-206ENST00000448745 TOGARAM1Q9Y4F4 1720 aa10.08□□□□□ -0.8
CPSF7-206ENST00000448745 NKX1-1Q15270 411 aaPredicted RBP10.07□□□□□ -0.8
CPSF7-206ENST00000448745 SLC4A10Q6U841 1118 aa10.07□□□□□ -0.8
CPSF7-206ENST00000448745 NOL8Q76FK4 1167 aaKnown RBP10.07□□□□□ -0.8
CPSF7-206ENST00000448745 SPG7Q9UQ90 795 aa10.07□□□□□ -0.8
CPSF7-206ENST00000448745 EXOC6BQ9Y2D4 811 aa10.07□□□□□ -0.8
CPSF7-206ENST00000448745 SIPA1L3O60292 1781 aaPredicted RBP10.07□□□□□ -0.8
CPSF7-206ENST00000448745 BRWD3Q6RI45 1802 aa10.07□□□□□ -0.8
CPSF7-206ENST00000448745 GNAT3A8MTJ3 354 aa10.07□□□□□ -0.8
CPSF7-206ENST00000448745 RAB11FIP3O75154 756 aa10.07□□□□□ -0.8
CPSF7-206ENST00000448745 AKAP4Q5JQC9 854 aa10.07□□□□□ -0.8
CPSF7-206ENST00000448745 MCM10Q7L590 875 aa10.07□□□□□ -0.8
CPSF7-206ENST00000448745 LGR6Q9HBX8 967 aa10.07□□□□□ -0.8
CPSF7-206ENST00000448745 RAD50Q92878 1312 aa10.06□□□□□ -0.8
CPSF7-206ENST00000448745 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
CPSF7-206ENST00000448745 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
CPSF7-206ENST00000448745 HTATSF1O43719 755 aaKnown RBP10.06□□□□□ -0.8
CPSF7-206ENST00000448745 STX6O43752 255 aa10.06□□□□□ -0.8
CPSF7-206ENST00000448745 F13A1P00488 732 aa10.06□□□□□ -0.8
CPSF7-206ENST00000448745 PDIA4P13667 645 aaKnown RBP10.06□□□□□ -0.8
CPSF7-206ENST00000448745 HCLS1P14317 486 aaPredicted RBP10.06□□□□□ -0.8
CPSF7-206ENST00000448745 ZNF710Q8N1W2 664 aa10.06□□□□□ -0.8
CPSF7-206ENST00000448745 MARCH10Q8NA82 808 aaPredicted RBP10.06□□□□□ -0.8
CPSF7-206ENST00000448745 RTF1Q92541 710 aaKnown RBP10.06□□□□□ -0.8
CPSF7-206ENST00000448745 GDPD2Q9HCC8 539 aa10.06□□□□□ -0.8
CPSF7-206ENST00000448745 TSPYL4Q9UJ04 414 aa10.06□□□□□ -0.8
CPSF7-206ENST00000448745 SMC3Q9UQE7 1217 aa10.06□□□□□ -0.8
CPSF7-206ENST00000448745 CNPY2Q9Y2B0 182 aa10.06□□□□□ -0.8
CPSF7-206ENST00000448745 MRC1P22897 1456 aa10.06□□□□□ -0.8
CPSF7-206ENST00000448745 RBM6P78332 1123 aaKnown RBP10.05□□□□□ -0.8
CPSF7-206ENST00000448745 MPRIPQ6WCQ1 1025 aa10.05□□□□□ -0.8
CPSF7-206ENST00000448745 IFNL2Q8IZJ0 200 aa10.05□□□□□ -0.8
CPSF7-206ENST00000448745 FUCA2Q9BTY2 467 aa10.05□□□□□ -0.8
CPSF7-206ENST00000448745 UPF3BQ9BZI7 483 aaKnown RBP10.05□□□□□ -0.8
CPSF7-206ENST00000448745 TTC12Q9H892 705 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-206ENST00000448745 LIMCH1Q9UPQ0 1083 aa10.05□□□□□ -0.8
CPSF7-206ENST00000448745 EXOC5O00471 708 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 RNMTO43148 476 aaKnown RBP10.04□□□□□ -0.8
CPSF7-206ENST00000448745 DDB1Q16531 1140 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 CCDC30Q5VVM6 783 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 G2E3Q7L622 706 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 PDCL2Q8N4E4 241 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 DDX54Q8TDD1 881 aaKnown RBP10.04□□□□□ -0.8
CPSF7-206ENST00000448745 ZSCAN31Q96LW9 406 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-206ENST00000448745 TTC14Q96N46 770 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 ZNF830Q96NB3 372 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-206ENST00000448745 ARID3AQ99856 593 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 ITGB4P16144 1822 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 F6X3S4 739 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 CCDC192P0DO97 292 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 SYCP1Q15431 976 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 C1orf141Q5JVX7 400 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 PPP4R3BQ5MIZ7 849 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 TSHZ3Q63HK5 1081 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 SEPT12Q8IYM1 358 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 CNTROBQ8N137 903 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 KIAA1524Q8TCG1 905 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 DCAF5Q96JK2 942 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 BCL2L12Q9HB09 334 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 SNX14Q9Y5W7 946 aa10.04□□□□□ -0.8
CPSF7-206ENST00000448745 EP400Q96L91 3159 aa10.03□□□□□ -0.8
CPSF7-206ENST00000448745 SGSM2O43147 1006 aa10.03□□□□□ -0.8
CPSF7-206ENST00000448745 KIF20AO95235 890 aa10.03□□□□□ -0.8
CPSF7-206ENST00000448745 SYT1P21579 422 aa10.03□□□□□ -0.8
CPSF7-206ENST00000448745 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-206ENST00000448745 FOXD4L6Q3SYB3 417 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-206ENST00000448745 FOXD4L3Q6VB84 417 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-206ENST00000448745 ANKRD7Q92527 254 aa10.03□□□□□ -0.8
CPSF7-206ENST00000448745 PRDM10Q9NQV6 1147 aa10.03□□□□□ -0.8
CPSF7-206ENST00000448745 SH2B1Q9NRF2 756 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-206ENST00000448745 BCL9O00512 1426 aa10.03□□□□□ -0.8
CPSF7-206ENST00000448745 DOT1LQ8TEK3 1739 aa10.02□□□□□ -0.8
CPSF7-206ENST00000448745 SBF2Q86WG5 1849 aa10.02□□□□□ -0.8
CPSF7-206ENST00000448745 PNMA6EA0A0J9YXQ4 647 aa10.02□□□□□ -0.8
CPSF7-206ENST00000448745 FIBPO43427 364 aa10.02□□□□□ -0.8
CPSF7-206ENST00000448745 ZSCAN20P17040 1043 aaPredicted RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms