RNA–Protein interactions for RNA: ENST00000448011.3

NPIPP1-201, Transcript of nuclear pore complex interacting protein pseudogene 1, humanhuman

TSL 4

Gene NPIPP1, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPP1-201ENST00000448011 BCL2L12Q9HB09 334 aa9.55□□□□□ -0.88
NPIPP1-201ENST00000448011 COL11A2P13942 1736 aaPredicted RBP9.55□□□□□ -0.88
NPIPP1-201ENST00000448011 TIAM2Q8IVF5 1701 aa9.54□□□□□ -0.88
NPIPP1-201ENST00000448011 BTBD11A6QL63 1104 aa9.54□□□□□ -0.88
NPIPP1-201ENST00000448011 STK25O00506 426 aa9.54□□□□□ -0.88
NPIPP1-201ENST00000448011 RTF1Q92541 710 aaKnown RBP9.54□□□□□ -0.88
NPIPP1-201ENST00000448011 KIF3CO14782 793 aa9.53□□□□□ -0.88
NPIPP1-201ENST00000448011 HTATSF1O43719 755 aaKnown RBP9.53□□□□□ -0.88
NPIPP1-201ENST00000448011 IL6STP40189 918 aaPredicted RBP9.53□□□□□ -0.88
NPIPP1-201ENST00000448011 C9orf131Q5VYM1 1079 aa9.53□□□□□ -0.88
NPIPP1-201ENST00000448011 DPY19L2Q6NUT2 758 aa9.53□□□□□ -0.88
NPIPP1-201ENST00000448011 NPM2Q86SE8 214 aaKnown RBP9.53□□□□□ -0.88
NPIPP1-201ENST00000448011 BOLA1Q9Y3E2 137 aa9.53□□□□□ -0.88
NPIPP1-201ENST00000448011 SLX4Q8IY92 1834 aa9.53□□□□□ -0.88
NPIPP1-201ENST00000448011 G3V3G9 751 aa9.52□□□□□ -0.89
NPIPP1-201ENST00000448011 KCNQ3O43525 872 aa9.52□□□□□ -0.89
NPIPP1-201ENST00000448011 A1BGP04217 495 aa9.52□□□□□ -0.89
NPIPP1-201ENST00000448011 BICDL1Q6ZP65 573 aa9.52□□□□□ -0.89
NPIPP1-201ENST00000448011 MCM10Q7L590 875 aa9.52□□□□□ -0.89
NPIPP1-201ENST00000448011 EFCAB3Q8N7B9 438 aa9.52□□□□□ -0.89
NPIPP1-201ENST00000448011 TBC1D2BQ9UPU7 963 aa9.52□□□□□ -0.89
NPIPP1-201ENST00000448011 ZNF330Q9Y3S2 320 aaPredicted RBP9.52□□□□□ -0.89
NPIPP1-201ENST00000448011 H0YIN7 160 aa9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 NEFMP07197 916 aa9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 SNRPA1P09661 255 aaKnown RBP9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 HSPA6P17066 643 aa9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 TBC1D9BQ66K14 1250 aa9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 C2CD5Q86YS7 1000 aa9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 TTLL6Q8N841 843 aa9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 RNF181Q9P0P0 153 aa9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 PDZRN3Q9UPQ7 1066 aa9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 USP16Q9Y5T5 823 aa9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 WDR90Q96KV7 1748 aa9.51□□□□□ -0.89
NPIPP1-201ENST00000448011 CARMIL3Q8ND23 1372 aa9.5□□□□□ -0.89
NPIPP1-201ENST00000448011 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.5□□□□□ -0.89
NPIPP1-201ENST00000448011 CAMTA2O94983 1202 aa9.5□□□□□ -0.89
NPIPP1-201ENST00000448011 DCTN1Q14203 1278 aa9.5□□□□□ -0.89
NPIPP1-201ENST00000448011 TAF7Q15545 349 aaPredicted RBP9.5□□□□□ -0.89
NPIPP1-201ENST00000448011 DZIP3Q86Y13 1208 aaKnown RBP9.5□□□□□ -0.89
NPIPP1-201ENST00000448011 ZFP91Q96JP5 570 aaPredicted RBP9.5□□□□□ -0.89
NPIPP1-201ENST00000448011 RYDENQ9NUL5 291 aaKnown RBP9.5□□□□□ -0.89
NPIPP1-201ENST00000448011 TOMM70O94826 608 aa9.49□□□□□ -0.89
NPIPP1-201ENST00000448011 PDE6BP35913 854 aa9.49□□□□□ -0.89
NPIPP1-201ENST00000448011 SETDB2Q96T68 719 aa9.49□□□□□ -0.89
NPIPP1-201ENST00000448011 BRIP1Q9BX63 1249 aa9.49□□□□□ -0.89
NPIPP1-201ENST00000448011 NMRK2Q9NPI5 230 aa9.49□□□□□ -0.89
NPIPP1-201ENST00000448011 KDM2BQ8NHM5 1336 aa9.49□□□□□ -0.89
NPIPP1-201ENST00000448011 ZC3H4Q9UPT8 1303 aaKnown RBP9.49□□□□□ -0.89
NPIPP1-201ENST00000448011 PRAMEF22A3QJZ6 481 aa9.48□□□□□ -0.89
NPIPP1-201ENST00000448011 NPHP1O15259 732 aa9.48□□□□□ -0.89
NPIPP1-201ENST00000448011 RASSF7Q02833 373 aa9.48□□□□□ -0.89
NPIPP1-201ENST00000448011 PRR5LQ6MZQ0 368 aa9.48□□□□□ -0.89
NPIPP1-201ENST00000448011 CLEC4GQ6UXB4 293 aa9.48□□□□□ -0.89
NPIPP1-201ENST00000448011 CDAN1Q8IWY9 1227 aa9.48□□□□□ -0.89
NPIPP1-201ENST00000448011 CNBD1Q8NA66 436 aa9.48□□□□□ -0.89
NPIPP1-201ENST00000448011 PNNQ9H307 717 aaKnown RBP9.48□□□□□ -0.89
NPIPP1-201ENST00000448011 LMNB1P20700 586 aa9.47□□□□□ -0.89
NPIPP1-201ENST00000448011 PIP4K2AP48426 406 aaPredicted RBP9.47□□□□□ -0.89
NPIPP1-201ENST00000448011 ST5P78524 1137 aa9.47□□□□□ -0.89
NPIPP1-201ENST00000448011 C16orf71Q8IYS4 520 aaPredicted RBP9.47□□□□□ -0.89
NPIPP1-201ENST00000448011 RBM46Q8TBY0 533 aaKnown RBP9.47□□□□□ -0.89
NPIPP1-201ENST00000448011 PNISRQ8TF01 805 aaKnown RBP9.47□□□□□ -0.89
NPIPP1-201ENST00000448011 ZNF622Q969S3 477 aaKnown RBP eCLIP9.47□□□□□ -0.89
NPIPP1-201ENST00000448011 PLEKHF1Q96S99 279 aa9.47□□□□□ -0.89
NPIPP1-201ENST00000448011 ZNF652Q9Y2D9 606 aa9.47□□□□□ -0.89
NPIPP1-201ENST00000448011 ANKRD36CQ5JPF3 1778 aa9.47□□□□□ -0.89
NPIPP1-201ENST00000448011 NBPF26B4DH59 902 aa9.46□□□□□ -0.9
NPIPP1-201ENST00000448011 APLP1P51693 650 aa9.46□□□□□ -0.9
NPIPP1-201ENST00000448011 NFE2L2Q16236 605 aa9.46□□□□□ -0.9
NPIPP1-201ENST00000448011 NBPF10Q6P3W6 841 aaKnown RBP9.46□□□□□ -0.9
NPIPP1-201ENST00000448011 CCDC24Q8N4L8 307 aa9.46□□□□□ -0.9
NPIPP1-201ENST00000448011 NBPF15Q8N660 670 aa9.46□□□□□ -0.9
NPIPP1-201ENST00000448011 MIS18AQ9NYP9 233 aa9.46□□□□□ -0.9
NPIPP1-201ENST00000448011 SCN4AP35499 1836 aa9.45□□□□□ -0.9
NPIPP1-201ENST00000448011 NFKBIEO00221 500 aa9.45□□□□□ -0.9
NPIPP1-201ENST00000448011 PRELPP51888 382 aa9.45□□□□□ -0.9
NPIPP1-201ENST00000448011 RALBP1Q15311 655 aa9.45□□□□□ -0.9
NPIPP1-201ENST00000448011 STYK1Q6J9G0 422 aa9.45□□□□□ -0.9
NPIPP1-201ENST00000448011 NBPF5PQ86XG9 351 aaPredicted RBP9.45□□□□□ -0.9
NPIPP1-201ENST00000448011 KCNV2Q8TDN2 545 aa9.45□□□□□ -0.9
NPIPP1-201ENST00000448011 CNKSR1Q969H4 720 aa9.45□□□□□ -0.9
NPIPP1-201ENST00000448011 RRAGCQ9HB90 399 aa9.45□□□□□ -0.9
NPIPP1-201ENST00000448011 MAPK8IP3Q9UPT6 1336 aa9.45□□□□□ -0.9
NPIPP1-201ENST00000448011 GLTPD2A6NH11 291 aa9.44□□□□□ -0.9
NPIPP1-201ENST00000448011 C21orf2O43822 256 aa9.44□□□□□ -0.9
NPIPP1-201ENST00000448011 SRGNP10124 158 aa9.44□□□□□ -0.9
NPIPP1-201ENST00000448011 EIF4A1P60842 406 aaKnown RBP9.44□□□□□ -0.9
NPIPP1-201ENST00000448011 FSTL1Q12841 308 aa9.44□□□□□ -0.9
NPIPP1-201ENST00000448011 TPTE2Q6XPS3 522 aa9.44□□□□□ -0.9
NPIPP1-201ENST00000448011 MASTLQ96GX5 879 aa9.44□□□□□ -0.9
NPIPP1-201ENST00000448011 NIP7Q9Y221 180 aaKnown RBP eCLIP9.44□□□□□ -0.9
NPIPP1-201ENST00000448011 LTBP3Q9NS15 1303 aa9.44□□□□□ -0.9
NPIPP1-201ENST00000448011 LAMB2P55268 1798 aa9.44□□□□□ -0.9
NPIPP1-201ENST00000448011 SOGA3Q5TF21 947 aa9.43□□□□□ -0.9
NPIPP1-201ENST00000448011 ZC3H15Q8WU90 426 aaKnown RBP9.43□□□□□ -0.9
NPIPP1-201ENST00000448011 THUMPD2Q9BTF0 503 aaKnown RBP9.43□□□□□ -0.9
NPIPP1-201ENST00000448011 STK24Q9Y6E0 443 aa9.43□□□□□ -0.9
NPIPP1-201ENST00000448011 KLRG2A4D1S0 409 aaPredicted RBP9.42□□□□□ -0.9
NPIPP1-201ENST00000448011 ERVV-1B6SEH8 477 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms