RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 NLRP10Q86W26 655 aa24.5■■□□□ 1.51
SGCE-207ENST00000447873 BCL2L12Q9HB09 334 aa24.5■■□□□ 1.51
SGCE-207ENST00000447873 ANO8Q9HCE9 1232 aaPredicted RBP24.5■■□□□ 1.51
SGCE-207ENST00000447873 HDAC5Q9UQL6 1122 aa24.5■■□□□ 1.51
SGCE-207ENST00000447873 NIP7Q9Y221 180 aaKnown RBP eCLIP24.5■■□□□ 1.51
SGCE-207ENST00000447873 PCDHB15Q9Y5E8 787 aa24.5■■□□□ 1.51
SGCE-207ENST00000447873 MSH5O43196 834 aa24.49■■□□□ 1.51
SGCE-207ENST00000447873 B4GALNT3Q6L9W6 998 aa24.49■■□□□ 1.51
SGCE-207ENST00000447873 LRRFIP2Q9Y608 721 aaKnown RBP24.49■■□□□ 1.51
SGCE-207ENST00000447873 UBN2Q6ZU65 1347 aa24.48■■□□□ 1.51
SGCE-207ENST00000447873 PARP10Q53GL7 1025 aa24.48■■□□□ 1.51
SGCE-207ENST00000447873 UBE3BQ7Z3V4 1068 aa24.48■■□□□ 1.51
SGCE-207ENST00000447873 H7C1W4 665 aa24.47■■□□□ 1.51
SGCE-207ENST00000447873 COL23A1Q86Y22 540 aaPredicted RBP24.47■■□□□ 1.51
SGCE-207ENST00000447873 JARID2Q92833 1246 aaPredicted RBP24.47■■□□□ 1.51
SGCE-207ENST00000447873 PNPLA7Q6ZV29 1317 aa24.47■■□□□ 1.51
SGCE-207ENST00000447873 QSER1Q2KHR3 1735 aa24.47■■□□□ 1.51
SGCE-207ENST00000447873 TBC1D9BQ66K14 1250 aa24.46■■□□□ 1.51
SGCE-207ENST00000447873 BICDL1Q6ZP65 573 aa24.46■■□□□ 1.51
SGCE-207ENST00000447873 RTL5Q5HYW3 569 aaPredicted RBP24.46■■□□□ 1.51
SGCE-207ENST00000447873 ZBTB38Q8NAP3 1195 aaPredicted RBP24.46■■□□□ 1.51
SGCE-207ENST00000447873 SETDB2Q96T68 719 aa24.46■■□□□ 1.51
SGCE-207ENST00000447873 TRMT112Q9UI30 125 aaKnown RBP24.46■■□□□ 1.51
SGCE-207ENST00000447873 GYS1P13807 737 aa24.45■■□□□ 1.5
SGCE-207ENST00000447873 ILDR2Q71H61 639 aa24.45■■□□□ 1.5
SGCE-207ENST00000447873 PPP1R42Q7Z4L9 355 aa24.45■■□□□ 1.5
SGCE-207ENST00000447873 PCCAP05165 728 aaPredicted RBP24.44■■□□□ 1.5
SGCE-207ENST00000447873 SUSD4Q5VX71 490 aa24.44■■□□□ 1.5
SGCE-207ENST00000447873 RPAP2Q8IXW5 612 aaPredicted RBP24.44■■□□□ 1.5
SGCE-207ENST00000447873 SUCLG2Q96I99 432 aa24.44■■□□□ 1.5
SGCE-207ENST00000447873 UTP14AQ9BVJ6 771 aaKnown RBP24.44■■□□□ 1.5
SGCE-207ENST00000447873 FAM177BA6PVY3 158 aa24.43■■□□□ 1.5
SGCE-207ENST00000447873 CASP7P55210 303 aa24.43■■□□□ 1.5
SGCE-207ENST00000447873 CEP85Q6P2H3 762 aa24.43■■□□□ 1.5
SGCE-207ENST00000447873 FAM89AQ96GI7 184 aa24.43■■□□□ 1.5
SGCE-207ENST00000447873 RWDD1Q9H446 243 aaPredicted RBP24.42■■□□□ 1.5
SGCE-207ENST00000447873 ANKRD44Q8N8A2 993 aa24.42■■□□□ 1.5
SGCE-207ENST00000447873 KAZALD1Q96I82 304 aa24.41■■□□□ 1.5
SGCE-207ENST00000447873 COL24A1Q17RW2 1714 aa24.41■■□□□ 1.5
SGCE-207ENST00000447873 SH3TC1Q8TE82 1336 aa24.41■■□□□ 1.5
SGCE-207ENST00000447873 HDAC1Q13547 482 aaPredicted RBP24.4■■□□□ 1.5
SGCE-207ENST00000447873 NFIXQ14938 502 aa24.4■■□□□ 1.5
SGCE-207ENST00000447873 SIRT2Q8IXJ6 389 aa24.4■■□□□ 1.5
SGCE-207ENST00000447873 BICC1Q9H694 974 aaKnown RBP24.4■■□□□ 1.5
SGCE-207ENST00000447873 NTSR2O95665 410 aa24.39■■□□□ 1.5
SGCE-207ENST00000447873 IGHDP01880 384 aa24.39■■□□□ 1.5
SGCE-207ENST00000447873 ATP8B2P98198 1209 aa24.39■■□□□ 1.5
SGCE-207ENST00000447873 NLGN1Q8N2Q7 840 aa24.39■■□□□ 1.5
SGCE-207ENST00000447873 CDHR2Q9BYE9 1310 aa24.39■■□□□ 1.49
SGCE-207ENST00000447873 NBPF5PQ86XG9 351 aaPredicted RBP24.38■■□□□ 1.49
SGCE-207ENST00000447873 NYXQ9GZU5 481 aa24.38■■□□□ 1.49
SGCE-207ENST00000447873 CARMIL3Q8ND23 1372 aa24.38■■□□□ 1.49
SGCE-207ENST00000447873 IRS4O14654 1257 aaPredicted RBP24.37■■□□□ 1.49
SGCE-207ENST00000447873 HMMRO75330 724 aa24.37■■□□□ 1.49
SGCE-207ENST00000447873 SYNE4Q8N205 404 aa24.37■■□□□ 1.49
SGCE-207ENST00000447873 GTF2E1P29083 439 aaPredicted RBP24.37■■□□□ 1.49
SGCE-207ENST00000447873 EPHA10Q5JZY3 1008 aa24.37■■□□□ 1.49
SGCE-207ENST00000447873 SRGAP3O43295 1099 aa24.36■■□□□ 1.49
SGCE-207ENST00000447873 TPTE2Q6XPS3 522 aa24.36■■□□□ 1.49
SGCE-207ENST00000447873 NUTM1Q86Y26 1132 aa24.36■■□□□ 1.49
SGCE-207ENST00000447873 MYH3P11055 1940 aa24.35■■□□□ 1.49
SGCE-207ENST00000447873 PNMA6EA0A0J9YXQ4 647 aa24.35■■□□□ 1.49
SGCE-207ENST00000447873 HSP90B1P14625 803 aaKnown RBP24.35■■□□□ 1.49
SGCE-207ENST00000447873 TM4SF1P30408 202 aa24.35■■□□□ 1.49
SGCE-207ENST00000447873 FOXO4P98177 505 aa24.35■■□□□ 1.49
SGCE-207ENST00000447873 MTX1Q13505 466 aa24.35■■□□□ 1.49
SGCE-207ENST00000447873 PLA2G12BQ9BX93 195 aa24.35■■□□□ 1.49
SGCE-207ENST00000447873 NPHP1O15259 732 aa24.34■■□□□ 1.49
SGCE-207ENST00000447873 RABL6Q3YEC7 729 aaPredicted RBP24.34■■□□□ 1.49
SGCE-207ENST00000447873 CENPQQ7L2Z9 268 aaPredicted RBP24.34■■□□□ 1.49
SGCE-207ENST00000447873 KDM2BQ8NHM5 1336 aa24.34■■□□□ 1.49
SGCE-207ENST00000447873 ERFEQ4G0M1 354 aa24.33■■□□□ 1.49
SGCE-207ENST00000447873 LAMB2P55268 1798 aa24.33■■□□□ 1.49
SGCE-207ENST00000447873 PDE8AO60658 829 aa24.33■■□□□ 1.48
SGCE-207ENST00000447873 LMBR1LQ6UX01 489 aa24.33■■□□□ 1.48
SGCE-207ENST00000447873 DDX60Q8IY21 1712 aaKnown RBP24.32■■□□□ 1.48
SGCE-207ENST00000447873 HCLS1P14317 486 aaPredicted RBP24.32■■□□□ 1.48
SGCE-207ENST00000447873 MSL1Q68DK7 614 aa24.32■■□□□ 1.48
SGCE-207ENST00000447873 SSH3Q8TE77 659 aa24.32■■□□□ 1.48
SGCE-207ENST00000447873 CHMP3Q9Y3E7 222 aa24.32■■□□□ 1.48
SGCE-207ENST00000447873 SERPINB2P05120 415 aa24.31■■□□□ 1.48
SGCE-207ENST00000447873 DDR1Q08345 913 aa24.31■■□□□ 1.48
SGCE-207ENST00000447873 POLA2Q14181 598 aa24.31■■□□□ 1.48
SGCE-207ENST00000447873 CNBD1Q8NA66 436 aa24.31■■□□□ 1.48
SGCE-207ENST00000447873 POLRMTO00411 1230 aaKnown RBP24.3■■□□□ 1.48
SGCE-207ENST00000447873 PDGFDQ9GZP0 370 aaPredicted RBP24.3■■□□□ 1.48
SGCE-207ENST00000447873 CTSWP56202 376 aa24.29■■□□□ 1.48
SGCE-207ENST00000447873 MMP10P09238 476 aa24.29■■□□□ 1.48
SGCE-207ENST00000447873 SLC10A5Q5PT55 438 aa24.29■■□□□ 1.48
SGCE-207ENST00000447873 SLC16A10Q8TF71 515 aa24.29■■□□□ 1.48
SGCE-207ENST00000447873 GCC1Q96CN9 775 aa24.29■■□□□ 1.48
SGCE-207ENST00000447873 DCTPP1Q9H773 170 aa24.29■■□□□ 1.48
SGCE-207ENST00000447873 CSF1RP07333 972 aa24.28■■□□□ 1.48
SGCE-207ENST00000447873 TTLL11Q8NHH1 800 aa24.28■■□□□ 1.48
SGCE-207ENST00000447873 PARP3Q9Y6F1 533 aa24.28■■□□□ 1.48
SGCE-207ENST00000447873 ABCC12Q96J65 1359 aa24.28■■□□□ 1.48
SGCE-207ENST00000447873 PRR5LQ6MZQ0 368 aa24.27■■□□□ 1.48
SGCE-207ENST00000447873 SMC5Q8IY18 1101 aa24.27■■□□□ 1.48
SGCE-207ENST00000447873 CCDC24Q8N4L8 307 aa24.27■■□□□ 1.48
SGCE-207ENST00000447873 CCDC85AQ96PX6 553 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms