RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 BRPF1P55201 1214 aaPredicted RBP14.71□□□□□ -0.05
LINC00408-201ENST00000447784 TPTE2Q6XPS3 522 aa14.71□□□□□ -0.05
LINC00408-201ENST00000447784 NBPF5PQ86XG9 351 aaPredicted RBP14.71□□□□□ -0.05
LINC00408-201ENST00000447784 C2CD5Q86YS7 1000 aa14.71□□□□□ -0.05
LINC00408-201ENST00000447784 PI4KAP1Q8N8J0 262 aa14.71□□□□□ -0.05
LINC00408-201ENST00000447784 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.71□□□□□ -0.05
LINC00408-201ENST00000447784 MAP3K2Q9Y2U5 619 aa14.71□□□□□ -0.05
LINC00408-201ENST00000447784 ATP10DQ9P241 1426 aa14.7□□□□□ -0.06
LINC00408-201ENST00000447784 ZKSCAN2Q63HK3 967 aa14.7□□□□□ -0.06
LINC00408-201ENST00000447784 GIGYF2Q6Y7W6 1299 aaKnown RBP14.7□□□□□ -0.06
LINC00408-201ENST00000447784 ARHGAP27Q6ZUM4 889 aa14.7□□□□□ -0.06
LINC00408-201ENST00000447784 TTLL6Q8N841 843 aa14.7□□□□□ -0.06
LINC00408-201ENST00000447784 DNAAF4Q8WXU2 420 aa14.7□□□□□ -0.06
LINC00408-201ENST00000447784 ARHGAP45Q92619 1136 aa14.7□□□□□ -0.06
LINC00408-201ENST00000447784 BCORQ6W2J9 1755 aa14.7□□□□□ -0.06
LINC00408-201ENST00000447784 TCIRG1Q13488 830 aa14.69□□□□□ -0.06
LINC00408-201ENST00000447784 SLC4A10Q6U841 1118 aa14.69□□□□□ -0.06
LINC00408-201ENST00000447784 N4BP2Q86UW6 1770 aaPredicted RBP14.68□□□□□ -0.06
LINC00408-201ENST00000447784 KLRG2A4D1S0 409 aaPredicted RBP14.68□□□□□ -0.06
LINC00408-201ENST00000447784 MS4A1P11836 297 aa14.68□□□□□ -0.06
LINC00408-201ENST00000447784 CCDC24Q8N4L8 307 aa14.68□□□□□ -0.06
LINC00408-201ENST00000447784 MYD88Q99836 296 aa14.68□□□□□ -0.06
LINC00408-201ENST00000447784 METTL22Q9BUU2 404 aaPredicted RBP14.68□□□□□ -0.06
LINC00408-201ENST00000447784 NYXQ9GZU5 481 aa14.68□□□□□ -0.06
LINC00408-201ENST00000447784 ADCY9O60503 1353 aa14.68□□□□□ -0.06
LINC00408-201ENST00000447784 F6X3S4 739 aa14.67□□□□□ -0.06
LINC00408-201ENST00000447784 SRGNP10124 158 aa14.67□□□□□ -0.06
LINC00408-201ENST00000447784 GPTP24298 496 aa14.67□□□□□ -0.06
LINC00408-201ENST00000447784 GTF2E1P29083 439 aaPredicted RBP14.67□□□□□ -0.06
LINC00408-201ENST00000447784 PARP10Q53GL7 1025 aa14.67□□□□□ -0.06
LINC00408-201ENST00000447784 STYK1Q6J9G0 422 aa14.67□□□□□ -0.06
LINC00408-201ENST00000447784 ATF7IPQ6VMQ6 1270 aa14.67□□□□□ -0.06
LINC00408-201ENST00000447784 FTSJ3Q8IY81 847 aaKnown RBP14.67□□□□□ -0.06
LINC00408-201ENST00000447784 ZNF34Q8IZ26 560 aa14.67□□□□□ -0.06
LINC00408-201ENST00000447784 IBTKQ9P2D0 1353 aaPredicted RBP14.67□□□□□ -0.06
LINC00408-201ENST00000447784 AFDNP55196 1824 aaKnown RBP14.66□□□□□ -0.06
LINC00408-201ENST00000447784 CHD4Q14839 1912 aa14.66□□□□□ -0.06
LINC00408-201ENST00000447784 ATP5J2-PTCD1G3V325 749 aa14.66□□□□□ -0.06
LINC00408-201ENST00000447784 LINS1Q8NG48 757 aa14.66□□□□□ -0.06
LINC00408-201ENST00000447784 CNKSR1Q969H4 720 aa14.66□□□□□ -0.06
LINC00408-201ENST00000447784 ZNF622Q969S3 477 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC00408-201ENST00000447784 MASTLQ96GX5 879 aa14.66□□□□□ -0.06
LINC00408-201ENST00000447784 FAM177BA6PVY3 158 aa14.65□□□□□ -0.06
LINC00408-201ENST00000447784 CCT4P50991 539 aaKnown RBP14.65□□□□□ -0.06
LINC00408-201ENST00000447784 PPP1R42Q7Z4L9 355 aa14.65□□□□□ -0.06
LINC00408-201ENST00000447784 SRCIN1Q9C0H9 1055 aa14.65□□□□□ -0.06
LINC00408-201ENST00000447784 UBN2Q6ZU65 1347 aa14.65□□□□□ -0.06
LINC00408-201ENST00000447784 BRCA1P38398 1863 aaKnown RBP14.64□□□□□ -0.07
LINC00408-201ENST00000447784 TRIM27P14373 513 aa14.64□□□□□ -0.07
LINC00408-201ENST00000447784 NPR1P16066 1061 aa14.64□□□□□ -0.07
LINC00408-201ENST00000447784 TRIM28Q13263 835 aaKnown RBP14.64□□□□□ -0.07
LINC00408-201ENST00000447784 SUSD4Q5VX71 490 aa14.64□□□□□ -0.07
LINC00408-201ENST00000447784 DZIP1LQ8IYY4 767 aaKnown RBP14.64□□□□□ -0.07
LINC00408-201ENST00000447784 CCDC191Q8NCU4 936 aa14.64□□□□□ -0.07
LINC00408-201ENST00000447784 CLUAP1Q96AJ1 413 aa14.64□□□□□ -0.07
LINC00408-201ENST00000447784 UTP14AQ9BVJ6 771 aaKnown RBP14.64□□□□□ -0.07
LINC00408-201ENST00000447784 CWC25Q9NXE8 425 aaPredicted RBP14.64□□□□□ -0.07
LINC00408-201ENST00000447784 ALDH1L1O75891 902 aa14.63□□□□□ -0.07
LINC00408-201ENST00000447784 NTSR2O95665 410 aa14.63□□□□□ -0.07
LINC00408-201ENST00000447784 BEND3Q5T5X7 828 aa14.63□□□□□ -0.07
LINC00408-201ENST00000447784 NLRP10Q86W26 655 aa14.63□□□□□ -0.07
LINC00408-201ENST00000447784 ISCA1Q9BUE6 129 aa14.63□□□□□ -0.07
LINC00408-201ENST00000447784 TRMT112Q9UI30 125 aaKnown RBP14.63□□□□□ -0.07
LINC00408-201ENST00000447784 RIC1Q4ADV7 1423 aa14.63□□□□□ -0.07
LINC00408-201ENST00000447784 RNF123Q5XPI4 1314 aa14.63□□□□□ -0.07
LINC00408-201ENST00000447784 NEURL1BA8MQ27 555 aa14.62□□□□□ -0.07
LINC00408-201ENST00000447784 PLIN1O60240 522 aa14.62□□□□□ -0.07
LINC00408-201ENST00000447784 CWF19L2Q2TBE0 894 aaKnown RBP14.62□□□□□ -0.07
LINC00408-201ENST00000447784 CRY2Q49AN0 593 aa14.62□□□□□ -0.07
LINC00408-201ENST00000447784 C9orf131Q5VYM1 1079 aa14.62□□□□□ -0.07
LINC00408-201ENST00000447784 IGKV5-2P06315 115 aa14.61□□□□□ -0.07
LINC00408-201ENST00000447784 HSP90B1P14625 803 aaKnown RBP14.61□□□□□ -0.07
LINC00408-201ENST00000447784 ALDH1B1P30837 517 aa14.61□□□□□ -0.07
LINC00408-201ENST00000447784 RRP1P56182 461 aaKnown RBP14.61□□□□□ -0.07
LINC00408-201ENST00000447784 ERFEQ4G0M1 354 aa14.61□□□□□ -0.07
LINC00408-201ENST00000447784 SOGA3Q5TF21 947 aa14.61□□□□□ -0.07
LINC00408-201ENST00000447784 PRPF40BQ6NWY9 871 aaKnown RBP14.61□□□□□ -0.07
LINC00408-201ENST00000447784 NUTM1Q86Y26 1132 aa14.61□□□□□ -0.07
LINC00408-201ENST00000447784 GPBP1L1Q9HC44 474 aaPredicted RBP14.61□□□□□ -0.07
LINC00408-201ENST00000447784 C9orf78Q9NZ63 289 aaPredicted RBP14.61□□□□□ -0.07
LINC00408-201ENST00000447784 ARFGEF1Q9Y6D6 1849 aa14.61□□□□□ -0.07
LINC00408-201ENST00000447784 ABCC12Q96J65 1359 aa14.6□□□□□ -0.07
LINC00408-201ENST00000447784 DLEC1Q9Y238 1755 aa14.6□□□□□ -0.07
LINC00408-201ENST00000447784 C21orf2O43822 256 aa14.6□□□□□ -0.07
LINC00408-201ENST00000447784 LMNB1P20700 586 aa14.6□□□□□ -0.07
LINC00408-201ENST00000447784 GCKRQ14397 625 aa14.6□□□□□ -0.07
LINC00408-201ENST00000447784 PDE3AQ14432 1141 aa14.6□□□□□ -0.07
LINC00408-201ENST00000447784 SLC10A5Q5PT55 438 aa14.6□□□□□ -0.07
LINC00408-201ENST00000447784 RNF181Q9P0P0 153 aa14.6□□□□□ -0.07
LINC00408-201ENST00000447784 SUPT16HQ9Y5B9 1047 aaKnown RBP14.6□□□□□ -0.07
LINC00408-201ENST00000447784 ANKRD31Q8N7Z5 1873 aa14.6□□□□□ -0.07
LINC00408-201ENST00000447784 SH3TC1Q8TE82 1336 aa14.6□□□□□ -0.07
LINC00408-201ENST00000447784 NFKBIEO00221 500 aa14.59□□□□□ -0.07
LINC00408-201ENST00000447784 HOXA10P31260 410 aaPredicted RBP14.59□□□□□ -0.07
LINC00408-201ENST00000447784 INTS3Q68E01 1043 aaKnown RBP14.59□□□□□ -0.07
LINC00408-201ENST00000447784 ITPRIPQ8IWB1 547 aa14.59□□□□□ -0.07
LINC00408-201ENST00000447784 ZBTB38Q8NAP3 1195 aaPredicted RBP14.59□□□□□ -0.07
LINC00408-201ENST00000447784 C7orf43Q8WVR3 580 aa14.59□□□□□ -0.07
LINC00408-201ENST00000447784 HDAC5Q9UQL6 1122 aa14.59□□□□□ -0.07
LINC00408-201ENST00000447784 ABCC4O15439 1325 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms