RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SRP68Q9UHB9 627 aaKnown RBP31■■■□□ 2.55
RFFL-206ENST00000447669 FAM177BA6PVY3 158 aa30.98■■■□□ 2.55
RFFL-206ENST00000447669 SMARCA5O60264 1052 aaPredicted RBP30.98■■■□□ 2.55
RFFL-206ENST00000447669 POLA2Q14181 598 aa30.98■■■□□ 2.55
RFFL-206ENST00000447669 RTCBQ9Y3I0 505 aaKnown RBP30.98■■■□□ 2.55
RFFL-206ENST00000447669 TRIM28Q13263 835 aaKnown RBP30.98■■■□□ 2.55
RFFL-206ENST00000447669 CHD1LQ86WJ1 897 aa30.98■■■□□ 2.55
RFFL-206ENST00000447669 IBTKQ9P2D0 1353 aaPredicted RBP30.97■■■□□ 2.55
RFFL-206ENST00000447669 ZNF34Q8IZ26 560 aa30.97■■■□□ 2.55
RFFL-206ENST00000447669 AK7Q96M32 723 aa30.97■■■□□ 2.55
RFFL-206ENST00000447669 PA2G4Q9UQ80 394 aaKnown RBP30.97■■■□□ 2.55
RFFL-206ENST00000447669 HSP90AB3PQ58FF7 597 aa30.96■■■□□ 2.55
RFFL-206ENST00000447669 SLC27A3Q5K4L6 730 aa30.96■■■□□ 2.55
RFFL-206ENST00000447669 ARHGEF1Q92888 912 aaKnown RBP30.96■■■□□ 2.55
RFFL-206ENST00000447669 MTX1Q13505 466 aa30.95■■■□□ 2.54
RFFL-206ENST00000447669 USPL1Q5W0Q7 1092 aa30.95■■■□□ 2.54
RFFL-206ENST00000447669 KLHDC4Q8TBB5 520 aa30.95■■■□□ 2.54
RFFL-206ENST00000447669 TNS1Q9HBL0 1735 aaKnown RBP30.94■■■□□ 2.54
RFFL-206ENST00000447669 FOXO4P98177 505 aa30.94■■■□□ 2.54
RFFL-206ENST00000447669 C16orf71Q8IYS4 520 aaPredicted RBP30.94■■■□□ 2.54
RFFL-206ENST00000447669 BCL2L12Q9HB09 334 aa30.94■■■□□ 2.54
RFFL-206ENST00000447669 BCORQ6W2J9 1755 aa30.94■■■□□ 2.54
RFFL-206ENST00000447669 PLSCR1O15162 318 aa30.93■■■□□ 2.54
RFFL-206ENST00000447669 SURF6O75683 361 aaKnown RBP30.93■■■□□ 2.54
RFFL-206ENST00000447669 SUSD4Q5VX71 490 aa30.93■■■□□ 2.54
RFFL-206ENST00000447669 HDAC5Q9UQL6 1122 aa30.93■■■□□ 2.54
RFFL-206ENST00000447669 NIP7Q9Y221 180 aaKnown RBP eCLIP30.93■■■□□ 2.54
RFFL-206ENST00000447669 LMBR1LQ6UX01 489 aa30.91■■■□□ 2.54
RFFL-206ENST00000447669 BICDL1Q6ZP65 573 aa30.91■■■□□ 2.54
RFFL-206ENST00000447669 ZBTB38Q8NAP3 1195 aaPredicted RBP30.91■■■□□ 2.54
RFFL-206ENST00000447669 TRMT112Q9UI30 125 aaKnown RBP30.91■■■□□ 2.54
RFFL-206ENST00000447669 PCCAP05165 728 aaPredicted RBP30.91■■■□□ 2.54
RFFL-206ENST00000447669 NARFQ9UHQ1 456 aa30.9■■■□□ 2.54
RFFL-206ENST00000447669 CCDC85AQ96PX6 553 aaPredicted RBP30.9■■■□□ 2.54
RFFL-206ENST00000447669 CHMP3Q9Y3E7 222 aa30.9■■■□□ 2.54
RFFL-206ENST00000447669 UBR3Q6ZT12 1888 aa30.9■■■□□ 2.54
RFFL-206ENST00000447669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.89■■■□□ 2.54
RFFL-206ENST00000447669 TRAPPC3LQ5T215 181 aa30.89■■■□□ 2.54
RFFL-206ENST00000447669 OTUD7AQ8TE49 926 aaPredicted RBP30.89■■■□□ 2.54
RFFL-206ENST00000447669 C4AP0C0L4 1744 aa30.89■■■□□ 2.54
RFFL-206ENST00000447669 RABL6Q3YEC7 729 aaPredicted RBP30.88■■■□□ 2.53
RFFL-206ENST00000447669 TBC1D9BQ66K14 1250 aa30.88■■■□□ 2.53
RFFL-206ENST00000447669 ZPR1O75312 459 aa30.88■■■□□ 2.53
RFFL-206ENST00000447669 SIL1Q9H173 461 aa30.87■■■□□ 2.53
RFFL-206ENST00000447669 RFC4P35249 363 aa30.86■■■□□ 2.53
RFFL-206ENST00000447669 ZNF827Q17R98 1081 aa30.86■■■□□ 2.53
RFFL-206ENST00000447669 SCN7AQ01118 1682 aa30.86■■■□□ 2.53
RFFL-206ENST00000447669 EN1Q05925 392 aaPredicted RBP30.86■■■□□ 2.53
RFFL-206ENST00000447669 NUTM1Q86Y26 1132 aa30.86■■■□□ 2.53
RFFL-206ENST00000447669 ZNF652Q9Y2D9 606 aa30.86■■■□□ 2.53
RFFL-206ENST00000447669 CLEC4GQ6UXB4 293 aa30.85■■■□□ 2.53
RFFL-206ENST00000447669 IL1RAPL2Q9NP60 686 aa30.85■■■□□ 2.53
RFFL-206ENST00000447669 RFX5P48382 616 aaPredicted RBP30.85■■■□□ 2.53
RFFL-206ENST00000447669 IRS4O14654 1257 aaPredicted RBP30.84■■■□□ 2.53
RFFL-206ENST00000447669 EZH2Q15910 746 aaKnown RBP30.83■■■□□ 2.53
RFFL-206ENST00000447669 LRRCC1Q9C099 1032 aa30.83■■■□□ 2.53
RFFL-206ENST00000447669 HCLS1P14317 486 aaPredicted RBP30.83■■■□□ 2.53
RFFL-206ENST00000447669 UTP14AQ9BVJ6 771 aaKnown RBP30.83■■■□□ 2.53
RFFL-206ENST00000447669 USP42Q9H9J4 1324 aaKnown RBP30.83■■■□□ 2.53
RFFL-206ENST00000447669 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.83■■■□□ 2.53
RFFL-206ENST00000447669 NTSR2O95665 410 aa30.81■■■□□ 2.52
RFFL-206ENST00000447669 OS9Q13438 667 aaPredicted RBP30.81■■■□□ 2.52
RFFL-206ENST00000447669 ZBTB47Q9UFB7 747 aaPredicted RBP30.81■■■□□ 2.52
RFFL-206ENST00000447669 NOP58Q9Y2X3 529 aaKnown RBP30.81■■■□□ 2.52
RFFL-206ENST00000447669 PTPN12Q05209 780 aaKnown RBP30.81■■■□□ 2.52
RFFL-206ENST00000447669 ZNF594Q96JF6 807 aaPredicted RBP30.81■■■□□ 2.52
RFFL-206ENST00000447669 CDHR2Q9BYE9 1310 aa30.8■■■□□ 2.52
RFFL-206ENST00000447669 PARP10Q53GL7 1025 aa30.8■■■□□ 2.52
RFFL-206ENST00000447669 RHPN1Q8TCX5 695 aa30.8■■■□□ 2.52
RFFL-206ENST00000447669 TSHZ2Q9NRE2 1034 aa30.8■■■□□ 2.52
RFFL-206ENST00000447669 TFCP2L1Q9NZI6 479 aa30.8■■■□□ 2.52
RFFL-206ENST00000447669 FAM161AQ3B820 660 aa30.79■■■□□ 2.52
RFFL-206ENST00000447669 DEFB132Q7Z7B7 95 aa30.78■■■□□ 2.52
RFFL-206ENST00000447669 PLEKHM2Q8IWE5 1019 aa30.78■■■□□ 2.52
RFFL-206ENST00000447669 AKT1S1Q96B36 256 aa30.78■■■□□ 2.52
RFFL-206ENST00000447669 PLA2G12BQ9BX93 195 aa30.78■■■□□ 2.52
RFFL-206ENST00000447669 SH3TC1Q8TE82 1336 aa30.78■■■□□ 2.52
RFFL-206ENST00000447669 CCDC24Q8N4L8 307 aa30.78■■■□□ 2.52
RFFL-206ENST00000447669 CAMKK2Q96RR4 588 aa30.77■■■□□ 2.52
RFFL-206ENST00000447669 RAB11FIP3O75154 756 aa30.76■■■□□ 2.52
RFFL-206ENST00000447669 SASH1O94885 1247 aa30.76■■■□□ 2.52
RFFL-206ENST00000447669 TSHZ3Q63HK5 1081 aa30.76■■■□□ 2.52
RFFL-206ENST00000447669 TTLL11Q8NHH1 800 aa30.76■■■□□ 2.52
RFFL-206ENST00000447669 MYH3P11055 1940 aa30.76■■■□□ 2.51
RFFL-206ENST00000447669 SSFA2P28290 1259 aa30.76■■■□□ 2.51
RFFL-206ENST00000447669 ERFEQ4G0M1 354 aa30.76■■■□□ 2.51
RFFL-206ENST00000447669 SETDB2Q96T68 719 aa30.76■■■□□ 2.51
RFFL-206ENST00000447669 TUBGCP6Q96RT7 1819 aa30.75■■■□□ 2.51
RFFL-206ENST00000447669 CSF1RP07333 972 aa30.75■■■□□ 2.51
RFFL-206ENST00000447669 ADRA2BP18089 450 aa30.75■■■□□ 2.51
RFFL-206ENST00000447669 CTSWP56202 376 aa30.75■■■□□ 2.51
RFFL-206ENST00000447669 G3BP1Q13283 466 aaKnown RBP eCLIP30.75■■■□□ 2.51
RFFL-206ENST00000447669 GREM2Q9H772 168 aa30.75■■■□□ 2.51
RFFL-206ENST00000447669 COPRSQ9NQ92 184 aa30.75■■■□□ 2.51
RFFL-206ENST00000447669 KIF1BPQ96EK5 621 aa30.74■■■□□ 2.51
RFFL-206ENST00000447669 PDE8AO60658 829 aa30.74■■■□□ 2.51
RFFL-206ENST00000447669 GYS1P13807 737 aa30.74■■■□□ 2.51
RFFL-206ENST00000447669 DDX60Q8IY21 1712 aaKnown RBP30.74■■■□□ 2.51
RFFL-206ENST00000447669 MSH5O43196 834 aa30.72■■■□□ 2.51
RFFL-206ENST00000447669 NFIXQ14938 502 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms