RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 HMMRO75330 724 aa7.27□□□□□ -1.25
PROM1-201ENST00000447510 SLC15A2Q16348 729 aa7.27□□□□□ -1.25
PROM1-201ENST00000447510 UBE3BQ7Z3V4 1068 aa7.27□□□□□ -1.25
PROM1-201ENST00000447510 LINS1Q8NG48 757 aa7.27□□□□□ -1.25
PROM1-201ENST00000447510 UPF1Q92900 1129 aaKnown RBP eCLIP7.27□□□□□ -1.25
PROM1-201ENST00000447510 C1orf115Q9H7X2 142 aa7.27□□□□□ -1.25
PROM1-201ENST00000447510 FOXD4L1Q9NU39 408 aa7.27□□□□□ -1.25
PROM1-201ENST00000447510 TPTE2Q6XPS3 522 aa7.27□□□□□ -1.25
PROM1-201ENST00000447510 METTL22Q9BUU2 404 aaPredicted RBP7.27□□□□□ -1.25
PROM1-201ENST00000447510 GNAI2P04899 355 aa7.27□□□□□ -1.25
PROM1-201ENST00000447510 MCM4P33991 863 aa7.27□□□□□ -1.25
PROM1-201ENST00000447510 MVPQ14764 893 aaKnown RBP7.27□□□□□ -1.25
PROM1-201ENST00000447510 NLGN1Q8N2Q7 840 aa7.27□□□□□ -1.25
PROM1-201ENST00000447510 UTP14AQ9BVJ6 771 aaKnown RBP7.27□□□□□ -1.25
PROM1-201ENST00000447510 COL15A1P39059 1388 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 CNTNAP4Q9C0A0 1308 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 SEC24BO95487 1268 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 ADRA2BP18089 450 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 SSFA2P28290 1259 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 TCIRG1Q13488 830 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 INTS5Q6P9B9 1019 aaKnown RBP7.26□□□□□ -1.25
PROM1-201ENST00000447510 ATF5Q9Y2D1 282 aaPredicted RBP7.26□□□□□ -1.25
PROM1-201ENST00000447510 EIF5P55010 431 aaKnown RBP7.26□□□□□ -1.25
PROM1-201ENST00000447510 ST5P78524 1137 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 DNTTIP2Q5QJE6 756 aaKnown RBP7.26□□□□□ -1.25
PROM1-201ENST00000447510 CCDC24Q8N4L8 307 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 NARFQ9UHQ1 456 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.26□□□□□ -1.25
PROM1-201ENST00000447510 ALDH1L1O75891 902 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 ZBTB7AO95365 584 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 GIGYF2Q6Y7W6 1299 aaKnown RBP7.26□□□□□ -1.25
PROM1-201ENST00000447510 NYXQ9GZU5 481 aa7.26□□□□□ -1.25
PROM1-201ENST00000447510 LRRC37A3O60309 1634 aa7.25□□□□□ -1.25
PROM1-201ENST00000447510 PARP10Q53GL7 1025 aa7.25□□□□□ -1.25
PROM1-201ENST00000447510 CNBD1Q8NA66 436 aa7.25□□□□□ -1.25
PROM1-201ENST00000447510 FAM89AQ96GI7 184 aa7.25□□□□□ -1.25
PROM1-201ENST00000447510 CAMKK2Q96RR4 588 aa7.25□□□□□ -1.25
PROM1-201ENST00000447510 HLFQ16534 295 aa7.25□□□□□ -1.25
PROM1-201ENST00000447510 ILDR2Q71H61 639 aa7.25□□□□□ -1.25
PROM1-201ENST00000447510 RWDD1Q9H446 243 aaPredicted RBP7.25□□□□□ -1.25
PROM1-201ENST00000447510 ERVV-1B6SEH8 477 aa7.25□□□□□ -1.25
PROM1-201ENST00000447510 GRM8O00222 908 aa7.25□□□□□ -1.25
PROM1-201ENST00000447510 NUTM1Q86Y26 1132 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 CCDC191Q8NCU4 936 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 NLRP3Q96P20 1036 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 DLG5Q8TDM6 1919 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 IRS4O14654 1257 aaPredicted RBP7.24□□□□□ -1.25
PROM1-201ENST00000447510 RLBP1P12271 317 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 CDK11BP21127 795 aaKnown RBP7.24□□□□□ -1.25
PROM1-201ENST00000447510 MFAP1P55081 439 aaKnown RBP7.24□□□□□ -1.25
PROM1-201ENST00000447510 PDIA6Q15084 440 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 ZNF827Q17R98 1081 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 CCDC57Q2TAC2 916 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 PROM2Q8N271 834 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 RPGRQ92834 1020 aaKnown RBP7.24□□□□□ -1.25
PROM1-201ENST00000447510 MEIS3Q99687 375 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 LRRFIP2Q9Y608 721 aaKnown RBP7.24□□□□□ -1.25
PROM1-201ENST00000447510 MMP10P09238 476 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 PDIA4P13667 645 aaKnown RBP7.24□□□□□ -1.25
PROM1-201ENST00000447510 HCLS1P14317 486 aaPredicted RBP7.24□□□□□ -1.25
PROM1-201ENST00000447510 COL23A1Q86Y22 540 aaPredicted RBP7.24□□□□□ -1.25
PROM1-201ENST00000447510 PLCD3Q8N3E9 789 aa7.24□□□□□ -1.25
PROM1-201ENST00000447510 ZNF622Q969S3 477 aaKnown RBP eCLIP7.24□□□□□ -1.25
PROM1-201ENST00000447510 SH3TC1Q8TE82 1336 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 PKD1L3Q7Z443 1732 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 G3BP1Q13283 466 aaKnown RBP eCLIP7.23□□□□□ -1.25
PROM1-201ENST00000447510 CLEC4GQ6UXB4 293 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 WWC3Q9ULE0 1092 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 UQCRHLA0A096LP55 91 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 NEURL1BA8MQ27 555 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 SRGAP3O43295 1099 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 UQCRHP07919 91 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 GCKRQ14397 625 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 MPHOSPH8Q99549 860 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 VGLL3A8MV65 326 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 G3V3G9 751 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 SERPINB2P05120 415 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 GORABQ5T7V8 394 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 DCAF8Q5TAQ9 597 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 TBC1D2Q9BYX2 928 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 CNNM1Q9NRU3 951 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 PRDM4Q9UKN5 801 aa7.23□□□□□ -1.25
PROM1-201ENST00000447510 DOT1LQ8TEK3 1739 aa7.22□□□□□ -1.25
PROM1-201ENST00000447510 SURF6O75683 361 aaKnown RBP7.22□□□□□ -1.25
PROM1-201ENST00000447510 CAMTA2O94983 1202 aa7.22□□□□□ -1.25
PROM1-201ENST00000447510 KCNJ4P48050 445 aa7.22□□□□□ -1.25
PROM1-201ENST00000447510 BEND3Q5T5X7 828 aa7.22□□□□□ -1.25
PROM1-201ENST00000447510 TBC1D9BQ66K14 1250 aa7.22□□□□□ -1.25
PROM1-201ENST00000447510 DDX46Q7L014 1031 aaKnown RBP7.22□□□□□ -1.25
PROM1-201ENST00000447510 SIL1Q9H173 461 aa7.22□□□□□ -1.25
PROM1-201ENST00000447510 ZNF219Q9P2Y4 722 aaPredicted RBP7.22□□□□□ -1.25
PROM1-201ENST00000447510 BRPF1P55201 1214 aaPredicted RBP7.22□□□□□ -1.25
PROM1-201ENST00000447510 IFIT5Q13325 482 aaKnown RBP7.22□□□□□ -1.25
PROM1-201ENST00000447510 INTS3Q68E01 1043 aaKnown RBP7.22□□□□□ -1.25
PROM1-201ENST00000447510 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.22□□□□□ -1.25
PROM1-201ENST00000447510 NLRP10Q86W26 655 aa7.22□□□□□ -1.25
PROM1-201ENST00000447510 THSD7AQ9UPZ6 1657 aa7.22□□□□□ -1.25
PROM1-201ENST00000447510 IGHMBP2P38935 993 aaKnown RBP7.22□□□□□ -1.25
PROM1-201ENST00000447510 NFIXQ14938 502 aa7.22□□□□□ -1.25
PROM1-201ENST00000447510 LMBR1LQ6UX01 489 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms