RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 SCNN1DP51172 638 aa16.51■□□□□ 0.23
SSR4-205ENST00000447375 PHACTR3Q96KR7 559 aa16.51■□□□□ 0.23
SSR4-205ENST00000447375 A1BGP04217 495 aa16.5■□□□□ 0.23
SSR4-205ENST00000447375 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
SSR4-205ENST00000447375 CIAPIN1Q6FI81 312 aa16.5■□□□□ 0.23
SSR4-205ENST00000447375 ZNF496Q96IT1 587 aaPredicted RBP16.5■□□□□ 0.23
SSR4-205ENST00000447375 HHIPL1Q96JK4 782 aa16.5■□□□□ 0.23
SSR4-205ENST00000447375 CELF2O95319 508 aaKnown RBP16.49■□□□□ 0.23
SSR4-205ENST00000447375 DZIP3Q86Y13 1208 aaKnown RBP16.49■□□□□ 0.23
SSR4-205ENST00000447375 GAS2L2Q8NHY3 880 aa16.49■□□□□ 0.23
SSR4-205ENST00000447375 PSMD1Q99460 953 aa16.49■□□□□ 0.23
SSR4-205ENST00000447375 HEG1Q9ULI3 1381 aa16.49■□□□□ 0.23
SSR4-205ENST00000447375 TPTE2Q6XPS3 522 aa16.48■□□□□ 0.23
SSR4-205ENST00000447375 ZNF790Q6PG37 636 aa16.47■□□□□ 0.23
SSR4-205ENST00000447375 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
SSR4-205ENST00000447375 TRPM7Q96QT4 1865 aa16.47■□□□□ 0.23
SSR4-205ENST00000447375 PDE4DIPQ5VU43 2346 aa16.46■□□□□ 0.23
SSR4-205ENST00000447375 GNAT3A8MTJ3 354 aa16.45■□□□□ 0.22
SSR4-205ENST00000447375 PLEKHF1Q96S99 279 aa16.45■□□□□ 0.22
SSR4-205ENST00000447375 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
SSR4-205ENST00000447375 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
SSR4-205ENST00000447375 FAM177BA6PVY3 158 aa16.44■□□□□ 0.22
SSR4-205ENST00000447375 NOGQ13253 232 aa16.44■□□□□ 0.22
SSR4-205ENST00000447375 CC2D2BQ6DHV5 1058 aa16.44■□□□□ 0.22
SSR4-205ENST00000447375 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
SSR4-205ENST00000447375 IL17REQ8NFR9 667 aa16.44■□□□□ 0.22
SSR4-205ENST00000447375 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
SSR4-205ENST00000447375 ZIC5Q96T25 663 aa16.44■□□□□ 0.22
SSR4-205ENST00000447375 GLIS2Q9BZE0 524 aaPredicted RBP16.44■□□□□ 0.22
SSR4-205ENST00000447375 ZNF408Q9H9D4 720 aa16.44■□□□□ 0.22
SSR4-205ENST00000447375 ADARB2Q9NS39 739 aaKnown RBP16.44■□□□□ 0.22
SSR4-205ENST00000447375 TEFQ10587 303 aa16.43■□□□□ 0.22
SSR4-205ENST00000447375 GPRC5DQ9NZD1 345 aa16.43■□□□□ 0.22
SSR4-205ENST00000447375 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSR4-205ENST00000447375 COL4A5P29400 1685 aa16.43■□□□□ 0.22
SSR4-205ENST00000447375 PIP4K2AP48426 406 aaPredicted RBP16.42■□□□□ 0.22
SSR4-205ENST00000447375 SNED1Q8TER0 1413 aa16.42■□□□□ 0.22
SSR4-205ENST00000447375 ANP32CO43423 234 aa16.41■□□□□ 0.22
SSR4-205ENST00000447375 NEFMP07197 916 aa16.41■□□□□ 0.22
SSR4-205ENST00000447375 GTF2E1P29083 439 aaPredicted RBP16.41■□□□□ 0.22
SSR4-205ENST00000447375 GRIPAP1Q4V328 841 aa16.41■□□□□ 0.22
SSR4-205ENST00000447375 PGAP2Q9UHJ9 254 aa16.41■□□□□ 0.22
SSR4-205ENST00000447375 BCORQ6W2J9 1755 aa16.41■□□□□ 0.22
SSR4-205ENST00000447375 HTATSF1O43719 755 aaKnown RBP16.4■□□□□ 0.22
SSR4-205ENST00000447375 NIM1KQ8IY84 436 aa16.4■□□□□ 0.22
SSR4-205ENST00000447375 SAGE1Q9NXZ1 904 aa16.4■□□□□ 0.22
SSR4-205ENST00000447375 CEMIPQ8WUJ3 1361 aa16.39■□□□□ 0.21
SSR4-205ENST00000447375 DLG5Q8TDM6 1919 aa16.39■□□□□ 0.21
SSR4-205ENST00000447375 HUNKP57058 714 aa16.39■□□□□ 0.21
SSR4-205ENST00000447375 CDC37L1Q7L3B6 337 aa16.39■□□□□ 0.21
SSR4-205ENST00000447375 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
SSR4-205ENST00000447375 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
SSR4-205ENST00000447375 WDR43Q15061 677 aaKnown RBP eCLIP16.38■□□□□ 0.21
SSR4-205ENST00000447375 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
SSR4-205ENST00000447375 CRY2Q49AN0 593 aa16.38■□□□□ 0.21
SSR4-205ENST00000447375 ZC3H15Q8WU90 426 aaKnown RBP16.38■□□□□ 0.21
SSR4-205ENST00000447375 RTF1Q92541 710 aaKnown RBP16.38■□□□□ 0.21
SSR4-205ENST00000447375 GCC1Q96CN9 775 aa16.38■□□□□ 0.21
SSR4-205ENST00000447375 RGL2O15211 777 aa16.37■□□□□ 0.21
SSR4-205ENST00000447375 KCNQ3O43525 872 aa16.37■□□□□ 0.21
SSR4-205ENST00000447375 NBPF15Q8N660 670 aa16.37■□□□□ 0.21
SSR4-205ENST00000447375 RNF186Q9NXI6 227 aa16.37■□□□□ 0.21
SSR4-205ENST00000447375 MAPK8IP3Q9UPT6 1336 aa16.37■□□□□ 0.21
SSR4-205ENST00000447375 PPIP5K2O43314 1243 aa16.36■□□□□ 0.21
SSR4-205ENST00000447375 TRPA1O75762 1119 aa16.36■□□□□ 0.21
SSR4-205ENST00000447375 GMPSP49915 693 aaPredicted RBP16.36■□□□□ 0.21
SSR4-205ENST00000447375 CXCL9Q07325 125 aa16.36■□□□□ 0.21
SSR4-205ENST00000447375 CCDC184Q52MB2 194 aa16.36■□□□□ 0.21
SSR4-205ENST00000447375 MCM10Q7L590 875 aa16.36■□□□□ 0.21
SSR4-205ENST00000447375 CTU1Q7Z7A3 348 aaKnown RBP16.36■□□□□ 0.21
SSR4-205ENST00000447375 RPGRQ92834 1020 aaKnown RBP16.36■□□□□ 0.21
SSR4-205ENST00000447375 BTBD11A6QL63 1104 aa16.35■□□□□ 0.21
SSR4-205ENST00000447375 FAM155AB1AL88 458 aaPredicted RBP16.35■□□□□ 0.21
SSR4-205ENST00000447375 TCERG1O14776 1098 aaKnown RBP16.35■□□□□ 0.21
SSR4-205ENST00000447375 HIRAP54198 1017 aaPredicted RBP16.35■□□□□ 0.21
SSR4-205ENST00000447375 KIF23Q02241 960 aaPredicted RBP16.35■□□□□ 0.21
SSR4-205ENST00000447375 RGMBQ6NW40 437 aa16.35■□□□□ 0.21
SSR4-205ENST00000447375 PRAMEF22A3QJZ6 481 aa16.34■□□□□ 0.21
SSR4-205ENST00000447375 HOXA10P31260 410 aaPredicted RBP16.34■□□□□ 0.21
SSR4-205ENST00000447375 DCTN1Q14203 1278 aa16.34■□□□□ 0.21
SSR4-205ENST00000447375 HLFQ16534 295 aa16.34■□□□□ 0.21
SSR4-205ENST00000447375 AOC3Q16853 763 aa16.34■□□□□ 0.21
SSR4-205ENST00000447375 USP48Q86UV5 1035 aa16.34■□□□□ 0.21
SSR4-205ENST00000447375 NUTM1Q86Y26 1132 aa16.34■□□□□ 0.21
SSR4-205ENST00000447375 CCDC102AQ96A19 550 aa16.34■□□□□ 0.21
SSR4-205ENST00000447375 RUNDC1Q96C34 613 aa16.34■□□□□ 0.21
SSR4-205ENST00000447375 NYXQ9GZU5 481 aa16.34■□□□□ 0.21
SSR4-205ENST00000447375 VPS33BQ9H267 617 aa16.34■□□□□ 0.21
SSR4-205ENST00000447375 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
SSR4-205ENST00000447375 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
SSR4-205ENST00000447375 TMPOP42166 694 aaKnown RBP16.33■□□□□ 0.2
SSR4-205ENST00000447375 SLC51AQ86UW1 340 aa16.33■□□□□ 0.2
SSR4-205ENST00000447375 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.2
SSR4-205ENST00000447375 RBM17Q96I25 401 aaKnown RBP16.33■□□□□ 0.2
SSR4-205ENST00000447375 BCL2L13Q9BXK5 485 aa16.33■□□□□ 0.2
SSR4-205ENST00000447375 HPS5Q9UPZ3 1129 aa16.33■□□□□ 0.2
SSR4-205ENST00000447375 DLK2Q6UY11 383 aa16.32■□□□□ 0.2
SSR4-205ENST00000447375 PNISRQ8TF01 805 aaKnown RBP16.32■□□□□ 0.2
SSR4-205ENST00000447375 CRAMP1Q96RY5 1269 aa16.32■□□□□ 0.2
SSR4-205ENST00000447375 TMX4Q9H1E5 349 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms