RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 AOX1Q06278 1338 aa13.85□□□□□ -0.19
GNE-203ENST00000447283 EPB41L2O43491 1005 aaKnown RBP13.85□□□□□ -0.19
GNE-203ENST00000447283 CHMLP26374 656 aa13.85□□□□□ -0.19
GNE-203ENST00000447283 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.85□□□□□ -0.19
GNE-203ENST00000447283 VSIG10Q8N0Z9 540 aa13.85□□□□□ -0.19
GNE-203ENST00000447283 SRCIN1Q9C0H9 1055 aa13.85□□□□□ -0.19
GNE-203ENST00000447283 DDX21Q9NR30 783 aaKnown RBP eCLIP13.85□□□□□ -0.19
GNE-203ENST00000447283 HYPKQ9NX55 129 aa13.85□□□□□ -0.19
GNE-203ENST00000447283 KAT6BQ8WYB5 2073 aa13.85□□□□□ -0.19
GNE-203ENST00000447283 PXDNLA1KZ92 1463 aa13.84□□□□□ -0.19
GNE-203ENST00000447283 TEX13AQ9BXU3 409 aaPredicted RBP13.84□□□□□ -0.19
GNE-203ENST00000447283 THSD7AQ9UPZ6 1657 aa13.84□□□□□ -0.19
GNE-203ENST00000447283 ZNF500O60304 480 aaPredicted RBP13.83□□□□□ -0.19
GNE-203ENST00000447283 ANXA1P04083 346 aa13.83□□□□□ -0.19
GNE-203ENST00000447283 RBM6P78332 1123 aaKnown RBP13.83□□□□□ -0.19
GNE-203ENST00000447283 PDIA6Q15084 440 aa13.83□□□□□ -0.19
GNE-203ENST00000447283 GLIPR1L2Q4G1C9 344 aa13.83□□□□□ -0.19
GNE-203ENST00000447283 KIAA1211Q6ZU35 1233 aa13.83□□□□□ -0.19
GNE-203ENST00000447283 PNMA6EA0A0J9YXQ4 647 aa13.83□□□□□ -0.2
GNE-203ENST00000447283 KCNQ2O43526 872 aa13.83□□□□□ -0.2
GNE-203ENST00000447283 TSHZ3Q63HK5 1081 aa13.83□□□□□ -0.2
GNE-203ENST00000447283 PALD1Q9ULE6 856 aa13.83□□□□□ -0.2
GNE-203ENST00000447283 KCPQ6ZWJ8 1503 aa13.83□□□□□ -0.2
GNE-203ENST00000447283 PROSER3Q2NL68 480 aa13.82□□□□□ -0.2
GNE-203ENST00000447283 NSFL1CQ9UNZ2 370 aaKnown RBP13.82□□□□□ -0.2
GNE-203ENST00000447283 ITGB4P16144 1822 aa13.82□□□□□ -0.2
GNE-203ENST00000447283 FAM182BQ5T319 152 aa13.82□□□□□ -0.2
GNE-203ENST00000447283 CHAMP1Q96JM3 812 aa13.82□□□□□ -0.2
GNE-203ENST00000447283 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.82□□□□□ -0.2
GNE-203ENST00000447283 PAPPAQ13219 1627 aa13.81□□□□□ -0.2
GNE-203ENST00000447283 SYCE3A1L190 88 aa13.81□□□□□ -0.2
GNE-203ENST00000447283 MYL6BP14649 208 aa13.81□□□□□ -0.2
GNE-203ENST00000447283 MCM5P33992 734 aa13.81□□□□□ -0.2
GNE-203ENST00000447283 ANO2Q9NQ90 1003 aa13.81□□□□□ -0.2
GNE-203ENST00000447283 STARD3NLO95772 234 aa13.81□□□□□ -0.2
GNE-203ENST00000447283 SMARCC1Q92922 1105 aaPredicted RBP13.81□□□□□ -0.2
GNE-203ENST00000447283 DOT1LQ8TEK3 1739 aa13.8□□□□□ -0.2
GNE-203ENST00000447283 UBR2Q8IWV8 1755 aa13.8□□□□□ -0.2
GNE-203ENST00000447283 TRIM6-TRIM34B2RNG4 842 aa13.8□□□□□ -0.2
GNE-203ENST00000447283 DDX58O95786 925 aaKnown RBP13.8□□□□□ -0.2
GNE-203ENST00000447283 RILPL2Q969X0 211 aa13.8□□□□□ -0.2
GNE-203ENST00000447283 ZKSCAN5Q9Y2L8 839 aa13.8□□□□□ -0.2
GNE-203ENST00000447283 PI4KAP2A4QPH2 592 aa13.79□□□□□ -0.2
GNE-203ENST00000447283 RXRBP28702 533 aa13.79□□□□□ -0.2
GNE-203ENST00000447283 AIMP1Q12904 312 aaKnown RBP13.79□□□□□ -0.2
GNE-203ENST00000447283 DNAJC10Q8IXB1 793 aa13.79□□□□□ -0.2
GNE-203ENST00000447283 PI4KAP1Q8N8J0 262 aa13.79□□□□□ -0.2
GNE-203ENST00000447283 LRRFIP2Q9Y608 721 aaKnown RBP13.79□□□□□ -0.2
GNE-203ENST00000447283 A1BGP04217 495 aa13.79□□□□□ -0.2
GNE-203ENST00000447283 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
GNE-203ENST00000447283 KRT27Q7Z3Y8 459 aa13.79□□□□□ -0.2
GNE-203ENST00000447283 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
GNE-203ENST00000447283 SYAP1Q96A49 352 aaPredicted RBP13.79□□□□□ -0.2
GNE-203ENST00000447283 SLC4A9Q96Q91 983 aa13.79□□□□□ -0.2
GNE-203ENST00000447283 C5P01031 1676 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 HSPA4P34932 840 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 PIP4K2AP48426 406 aaPredicted RBP13.78□□□□□ -0.2
GNE-203ENST00000447283 KSR2Q6VAB6 950 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 COPS6Q7L5N1 327 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 SSH3Q8TE77 659 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 DNAAF4Q8WXU2 420 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 USP44Q9H0E7 712 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 CCDC39Q9UFE4 941 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 LOC102724428A0A0B4J2F2 783 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 NBPF26B4DH59 902 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 RAB11FIP3O75154 756 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 SIK1P57059 783 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 NBPF14Q5TI25 921 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 NBPF10Q6P3W6 841 aaKnown RBP13.78□□□□□ -0.2
GNE-203ENST00000447283 LRP10Q7Z4F1 713 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 NBPF15Q8N660 670 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 XAGE3Q8WTP9 111 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 TCHHQ07283 1943 aa13.78□□□□□ -0.2
GNE-203ENST00000447283 UBTFL1P0CB47 393 aaPredicted RBP13.77□□□□□ -0.21
GNE-203ENST00000447283 ATP6V1AP38606 617 aa13.77□□□□□ -0.21
GNE-203ENST00000447283 FAM196AQ6ZSG2 479 aa13.77□□□□□ -0.21
GNE-203ENST00000447283 WDR33Q9C0J8 1336 aaKnown RBP13.77□□□□□ -0.21
GNE-203ENST00000447283 PALLDQ8WX93 1383 aa13.77□□□□□ -0.21
GNE-203ENST00000447283 CYP19A1P11511 503 aaPredicted RBP13.76□□□□□ -0.21
GNE-203ENST00000447283 ANKRD13DQ6ZTN6 518 aa13.76□□□□□ -0.21
GNE-203ENST00000447283 TSPY26PQ9H489 355 aa13.76□□□□□ -0.21
GNE-203ENST00000447283 RGS17Q9UGC6 210 aaPredicted RBP13.76□□□□□ -0.21
GNE-203ENST00000447283 MAP3K2Q9Y2U5 619 aa13.76□□□□□ -0.21
GNE-203ENST00000447283 PHF14O94880 888 aa13.76□□□□□ -0.21
GNE-203ENST00000447283 POLA2Q14181 598 aa13.76□□□□□ -0.21
GNE-203ENST00000447283 CSPP1Q1MSJ5 1256 aa13.76□□□□□ -0.21
GNE-203ENST00000447283 TPRNQ4KMQ1 711 aa13.76□□□□□ -0.21
GNE-203ENST00000447283 PTF1AQ7RTS3 328 aa13.76□□□□□ -0.21
GNE-203ENST00000447283 RIC3Q7Z5B4 369 aa13.76□□□□□ -0.21
GNE-203ENST00000447283 TMEM87AQ8NBN3 555 aa13.76□□□□□ -0.21
GNE-203ENST00000447283 UPF3BQ9BZI7 483 aaKnown RBP13.76□□□□□ -0.21
GNE-203ENST00000447283 PDCL3Q9H2J4 239 aa13.76□□□□□ -0.21
GNE-203ENST00000447283 ADCY9O60503 1353 aa13.75□□□□□ -0.21
GNE-203ENST00000447283 IL25Q9H293 177 aa13.75□□□□□ -0.21
GNE-203ENST00000447283 RAD50Q92878 1312 aa13.75□□□□□ -0.21
GNE-203ENST00000447283 BEND3Q5T5X7 828 aa13.75□□□□□ -0.21
GNE-203ENST00000447283 NOL8Q76FK4 1167 aaKnown RBP13.75□□□□□ -0.21
GNE-203ENST00000447283 BCL11BQ9C0K0 894 aaPredicted RBP13.75□□□□□ -0.21
GNE-203ENST00000447283 KLHL34Q8N239 644 aa13.74□□□□□ -0.21
GNE-203ENST00000447283 PI4K2BQ8TCG2 481 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms