RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 GIGYF1O75420 1035 aaPredicted RBP13.38□□□□□ -0.27
PTCH2-203ENST00000447098 IFIT1P09914 478 aaKnown RBP13.38□□□□□ -0.27
PTCH2-203ENST00000447098 ATP8B2P98198 1209 aa13.38□□□□□ -0.27
PTCH2-203ENST00000447098 NIP7Q9Y221 180 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTCH2-203ENST00000447098 TMX3Q96JJ7 454 aa13.38□□□□□ -0.27
PTCH2-203ENST00000447098 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
PTCH2-203ENST00000447098 BICC1Q9H694 974 aaKnown RBP13.38□□□□□ -0.27
PTCH2-203ENST00000447098 USP21Q9UK80 565 aa13.38□□□□□ -0.27
PTCH2-203ENST00000447098 PPP4R3BQ5MIZ7 849 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 DDX46Q7L014 1031 aaKnown RBP13.37□□□□□ -0.27
PTCH2-203ENST00000447098 ZNF771Q7L3S4 317 aaPredicted RBP13.37□□□□□ -0.27
PTCH2-203ENST00000447098 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 VWDEQ8N2E2 1590 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 SETBP1Q9Y6X0 1596 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 GOLIM4O00461 696 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 NOLC1Q14978 699 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTCH2-203ENST00000447098 ECHDC1Q9NTX5 307 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 ASAP1Q9ULH1 1129 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 ANKRD18BA2A2Z9 1011 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 HSP90AB3PQ58FF7 597 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 SPC24Q8NBT2 197 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 TSC1Q92574 1164 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 PRIMPOLQ96LW4 560 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 TTC12Q9H892 705 aaPredicted RBP13.37□□□□□ -0.27
PTCH2-203ENST00000447098 RAI14Q9P0K7 980 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 LRP2BPQ9P2M1 347 aa13.37□□□□□ -0.27
PTCH2-203ENST00000447098 RFC4P35249 363 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 PDE1AP54750 535 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 CLEC17AQ6ZS10 378 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 JAKMIP1Q96N16 626 aaKnown RBP13.36□□□□□ -0.27
PTCH2-203ENST00000447098 SF3A1Q15459 793 aaKnown RBP13.36□□□□□ -0.27
PTCH2-203ENST00000447098 SYNE3Q6ZMZ3 975 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 PDCL2Q8N4E4 241 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 ADGRB1O14514 1584 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 IQGAP1P46940 1657 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 ALDH1L1O75891 902 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 PRPF40BQ6NWY9 871 aaKnown RBP13.36□□□□□ -0.27
PTCH2-203ENST00000447098 PDLIM2Q96JY6 352 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 RIMS1Q86UR5 1692 aaKnown RBP13.36□□□□□ -0.27
PTCH2-203ENST00000447098 WDR33Q9C0J8 1336 aaKnown RBP13.36□□□□□ -0.27
PTCH2-203ENST00000447098 FIBPO43427 364 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 ADCY5O95622 1261 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
PTCH2-203ENST00000447098 DCTPP1Q9H773 170 aa13.36□□□□□ -0.27
PTCH2-203ENST00000447098 RICTORQ6R327 1708 aa13.35□□□□□ -0.27
PTCH2-203ENST00000447098 TTLL7Q6ZT98 887 aa13.35□□□□□ -0.27
PTCH2-203ENST00000447098 ATP6V1DQ9Y5K8 247 aa13.35□□□□□ -0.27
PTCH2-203ENST00000447098 DHX16O60231 1041 aaKnown RBP13.35□□□□□ -0.27
PTCH2-203ENST00000447098 NBPF5PQ86XG9 351 aaPredicted RBP13.35□□□□□ -0.27
PTCH2-203ENST00000447098 CPS1P31327 1500 aa13.35□□□□□ -0.27
PTCH2-203ENST00000447098 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
PTCH2-203ENST00000447098 HCLS1P14317 486 aaPredicted RBP13.34□□□□□ -0.27
PTCH2-203ENST00000447098 MYRIPQ8NFW9 859 aa13.34□□□□□ -0.27
PTCH2-203ENST00000447098 ANKIB1Q9P2G1 1089 aa13.34□□□□□ -0.27
PTCH2-203ENST00000447098 IQSEC2Q5JU85 1478 aa13.34□□□□□ -0.27
PTCH2-203ENST00000447098 ZNF594Q96JF6 807 aaPredicted RBP13.34□□□□□ -0.27
PTCH2-203ENST00000447098 CDK12Q9NYV4 1490 aaPredicted RBP13.34□□□□□ -0.27
PTCH2-203ENST00000447098 HIP1O00291 1037 aa13.34□□□□□ -0.27
PTCH2-203ENST00000447098 GNPATO15228 680 aa13.34□□□□□ -0.27
PTCH2-203ENST00000447098 PPFIA3O75145 1194 aa13.34□□□□□ -0.27
PTCH2-203ENST00000447098 NSFL1CQ9UNZ2 370 aaKnown RBP13.34□□□□□ -0.27
PTCH2-203ENST00000447098 DEPDC5O75140 1603 aa13.34□□□□□ -0.27
PTCH2-203ENST00000447098 LETM1O95202 739 aaPredicted RBP13.33□□□□□ -0.27
PTCH2-203ENST00000447098 AKAP17AQ02040 695 aaKnown RBP13.33□□□□□ -0.27
PTCH2-203ENST00000447098 SIRT2Q8IXJ6 389 aa13.33□□□□□ -0.27
PTCH2-203ENST00000447098 GNL3LQ9NVN8 582 aaKnown RBP13.33□□□□□ -0.27
PTCH2-203ENST00000447098 WDR17Q8IZU2 1322 aa13.33□□□□□ -0.27
PTCH2-203ENST00000447098 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.28
PTCH2-203ENST00000447098 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
PTCH2-203ENST00000447098 CPLX2Q6PUV4 134 aaKnown RBP13.33□□□□□ -0.28
PTCH2-203ENST00000447098 C17orf53Q8N3J3 647 aaPredicted RBP13.33□□□□□ -0.28
PTCH2-203ENST00000447098 CYP27B1O15528 508 aa13.33□□□□□ -0.28
PTCH2-203ENST00000447098 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTCH2-203ENST00000447098 CCDC183Q5T5S1 534 aa13.33□□□□□ -0.28
PTCH2-203ENST00000447098 NDUFB9Q9Y6M9 179 aa13.33□□□□□ -0.28
PTCH2-203ENST00000447098 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
PTCH2-203ENST00000447098 AMOTL1Q8IY63 956 aa13.32□□□□□ -0.28
PTCH2-203ENST00000447098 SUCLG2Q96I99 432 aa13.32□□□□□ -0.28
PTCH2-203ENST00000447098 USP44Q9H0E7 712 aa13.32□□□□□ -0.28
PTCH2-203ENST00000447098 CYP46A1Q9Y6A2 500 aa13.32□□□□□ -0.28
PTCH2-203ENST00000447098 TMEM131LA2VDJ0 1609 aa13.32□□□□□ -0.28
PTCH2-203ENST00000447098 TCEANC2Q96MN5 208 aa13.32□□□□□ -0.28
PTCH2-203ENST00000447098 TIMM10P62072 90 aa13.32□□□□□ -0.28
PTCH2-203ENST00000447098 USP48Q86UV5 1035 aa13.32□□□□□ -0.28
PTCH2-203ENST00000447098 NRXN1Q9ULB1 1477 aa13.32□□□□□ -0.28
PTCH2-203ENST00000447098 SPATA31D1Q6ZQQ2 1576 aa13.32□□□□□ -0.28
PTCH2-203ENST00000447098 IRS4O14654 1257 aaPredicted RBP13.31□□□□□ -0.28
PTCH2-203ENST00000447098 ATP2B1P20020 1258 aa13.31□□□□□ -0.28
PTCH2-203ENST00000447098 PSMA5P28066 241 aa13.31□□□□□ -0.28
PTCH2-203ENST00000447098 CARD10Q9BWT7 1032 aa13.31□□□□□ -0.28
PTCH2-203ENST00000447098 ERICH2A1L162 156 aa13.31□□□□□ -0.28
PTCH2-203ENST00000447098 ZNF853P0CG23 659 aa13.31□□□□□ -0.28
PTCH2-203ENST00000447098 SLC4A8Q2Y0W8 1093 aa13.31□□□□□ -0.28
PTCH2-203ENST00000447098 UVSSAQ2YD98 709 aa13.31□□□□□ -0.28
PTCH2-203ENST00000447098 BLOC1S2Q6QNY1 142 aa13.31□□□□□ -0.28
PTCH2-203ENST00000447098 ZNF592Q92610 1267 aa13.31□□□□□ -0.28
PTCH2-203ENST00000447098 SMARCC1Q92922 1105 aaPredicted RBP13.31□□□□□ -0.28
PTCH2-203ENST00000447098 AKAP2Q9Y2D5 859 aa13.31□□□□□ -0.28
PTCH2-203ENST00000447098 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
PTCH2-203ENST00000447098 ZC3H13Q5T200 1668 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms