RNA–Protein interactions for RNA: ENST00000446916.2

ATRN-202, Transcript of attractin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRN, Length 3,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-202ENST00000446916 PCDH11XQ9BZA7 1347 aa17.18■□□□□ 0.34
ATRN-202ENST00000446916 PCDH11YQ9BZA8 1340 aa17.18■□□□□ 0.34
ATRN-202ENST00000446916 PROSER3Q2NL68 480 aa17.18■□□□□ 0.34
ATRN-202ENST00000446916 CEP85Q6P2H3 762 aa17.18■□□□□ 0.34
ATRN-202ENST00000446916 DNAJC10Q8IXB1 793 aa17.18■□□□□ 0.34
ATRN-202ENST00000446916 SNRKQ9NRH2 765 aa17.18■□□□□ 0.34
ATRN-202ENST00000446916 SMC3Q9UQE7 1217 aa17.18■□□□□ 0.34
ATRN-202ENST00000446916 GRM8O00222 908 aa17.18■□□□□ 0.34
ATRN-202ENST00000446916 LMBR1LQ6UX01 489 aa17.18■□□□□ 0.34
ATRN-202ENST00000446916 IBSPP21815 317 aaPredicted RBP17.17■□□□□ 0.34
ATRN-202ENST00000446916 TTLL5Q6EMB2 1281 aa17.17■□□□□ 0.34
ATRN-202ENST00000446916 KCNQ4P56696 695 aa17.17■□□□□ 0.34
ATRN-202ENST00000446916 GIMAP6Q6P9H5 292 aa17.17■□□□□ 0.34
ATRN-202ENST00000446916 SPATA31D1Q6ZQQ2 1576 aa17.17■□□□□ 0.34
ATRN-202ENST00000446916 ZNF500O60304 480 aaPredicted RBP17.17■□□□□ 0.34
ATRN-202ENST00000446916 METTL24Q5JXM2 366 aa17.17■□□□□ 0.34
ATRN-202ENST00000446916 LMBRD1Q9NUN5 540 aa17.17■□□□□ 0.34
ATRN-202ENST00000446916 TNNT1P13805 278 aa17.16■□□□□ 0.34
ATRN-202ENST00000446916 HDAC1Q13547 482 aaPredicted RBP17.16■□□□□ 0.34
ATRN-202ENST00000446916 GPATCH11Q8N954 259 aa17.16■□□□□ 0.34
ATRN-202ENST00000446916 GPT2Q8TD30 523 aa17.16■□□□□ 0.34
ATRN-202ENST00000446916 DDX21Q9NR30 783 aaKnown RBP eCLIP17.16■□□□□ 0.34
ATRN-202ENST00000446916 CCDC112Q8NEF3 446 aa17.16■□□□□ 0.34
ATRN-202ENST00000446916 CWC25Q9NXE8 425 aaPredicted RBP17.16■□□□□ 0.34
ATRN-202ENST00000446916 CPSF1Q10570 1443 aaKnown RBP17.16■□□□□ 0.34
ATRN-202ENST00000446916 KDM4FA0A1W2PPD8 638 aa17.15■□□□□ 0.34
ATRN-202ENST00000446916 TTC39AQ5SRH9 613 aa17.15■□□□□ 0.34
ATRN-202ENST00000446916 SPATA31A3Q5VYP0 1347 aa17.15■□□□□ 0.34
ATRN-202ENST00000446916 NUCB1Q02818 461 aa17.15■□□□□ 0.34
ATRN-202ENST00000446916 GIGYF1O75420 1035 aaPredicted RBP17.15■□□□□ 0.34
ATRN-202ENST00000446916 SF3A1Q15459 793 aaKnown RBP17.15■□□□□ 0.34
ATRN-202ENST00000446916 LINS1Q8NG48 757 aa17.15■□□□□ 0.34
ATRN-202ENST00000446916 TMEM51Q9NW97 253 aa17.15■□□□□ 0.34
ATRN-202ENST00000446916 ZPR1O75312 459 aa17.14■□□□□ 0.33
ATRN-202ENST00000446916 STK3Q13188 491 aa17.14■□□□□ 0.33
ATRN-202ENST00000446916 IFIT5Q13325 482 aaKnown RBP17.14■□□□□ 0.33
ATRN-202ENST00000446916 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
ATRN-202ENST00000446916 IPO4Q8TEX9 1081 aaKnown RBP17.14■□□□□ 0.33
ATRN-202ENST00000446916 ZC3H13Q5T200 1668 aaKnown RBP17.14■□□□□ 0.33
ATRN-202ENST00000446916 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
ATRN-202ENST00000446916 H3BQV1 296 aa17.14■□□□□ 0.33
ATRN-202ENST00000446916 IFFO2Q5TF58 517 aa17.14■□□□□ 0.33
ATRN-202ENST00000446916 FAM89AQ96GI7 184 aa17.14■□□□□ 0.33
ATRN-202ENST00000446916 TIGD1Q96MW7 591 aa17.14■□□□□ 0.33
ATRN-202ENST00000446916 IRX3P78415 501 aaPredicted RBP17.14■□□□□ 0.33
ATRN-202ENST00000446916 PATL2C9JE40 543 aaKnown RBP17.13■□□□□ 0.33
ATRN-202ENST00000446916 CCDC158Q5M9N0 1113 aa17.13■□□□□ 0.33
ATRN-202ENST00000446916 CCDC24Q8N4L8 307 aa17.13■□□□□ 0.33
ATRN-202ENST00000446916 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
ATRN-202ENST00000446916 GADD45BO75293 160 aaPredicted RBP17.13■□□□□ 0.33
ATRN-202ENST00000446916 CKAP2LQ8IYA6 745 aa17.13■□□□□ 0.33
ATRN-202ENST00000446916 GTF3C6Q969F1 213 aa17.13■□□□□ 0.33
ATRN-202ENST00000446916 IDH1O75874 414 aaKnown RBP17.12■□□□□ 0.33
ATRN-202ENST00000446916 LDHAL6AQ6ZMR3 332 aa17.12■□□□□ 0.33
ATRN-202ENST00000446916 IQGAP1P46940 1657 aa17.12■□□□□ 0.33
ATRN-202ENST00000446916 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
ATRN-202ENST00000446916 MBD3O95983 291 aa17.12■□□□□ 0.33
ATRN-202ENST00000446916 RABEP1Q15276 862 aa17.12■□□□□ 0.33
ATRN-202ENST00000446916 WWC3Q9ULE0 1092 aa17.12■□□□□ 0.33
ATRN-202ENST00000446916 MTMR7Q9Y216 660 aa17.12■□□□□ 0.33
ATRN-202ENST00000446916 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
ATRN-202ENST00000446916 ZNF710Q8N1W2 664 aa17.11■□□□□ 0.33
ATRN-202ENST00000446916 ATP8B2P98198 1209 aa17.11■□□□□ 0.33
ATRN-202ENST00000446916 PRIMPOLQ96LW4 560 aa17.11■□□□□ 0.33
ATRN-202ENST00000446916 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.11■□□□□ 0.33
ATRN-202ENST00000446916 HELBQ8NG08 1087 aaPredicted RBP17.11■□□□□ 0.33
ATRN-202ENST00000446916 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
ATRN-202ENST00000446916 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
ATRN-202ENST00000446916 PPLO60437 1756 aa17.11■□□□□ 0.33
ATRN-202ENST00000446916 ANKARQ7Z5J8 1434 aa17.1■□□□□ 0.33
ATRN-202ENST00000446916 CYP27B1O15528 508 aa17.1■□□□□ 0.33
ATRN-202ENST00000446916 RAD21O60216 631 aa17.1■□□□□ 0.33
ATRN-202ENST00000446916 SDSP20132 328 aa17.1■□□□□ 0.33
ATRN-202ENST00000446916 DZIP3Q86Y13 1208 aaKnown RBP17.1■□□□□ 0.33
ATRN-202ENST00000446916 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
ATRN-202ENST00000446916 USP21Q9UK80 565 aa17.1■□□□□ 0.33
ATRN-202ENST00000446916 UTP14CQ5TAP6 766 aaKnown RBP17.1■□□□□ 0.33
ATRN-202ENST00000446916 RNF20Q5VTR2 975 aa17.1■□□□□ 0.33
ATRN-202ENST00000446916 CEP170BQ9Y4F5 1589 aaPredicted RBP17.1■□□□□ 0.33
ATRN-202ENST00000446916 C1orf167Q5SNV9 1468 aa17.09■□□□□ 0.33
ATRN-202ENST00000446916 PES1O00541 588 aaKnown RBP17.09■□□□□ 0.33
ATRN-202ENST00000446916 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
ATRN-202ENST00000446916 PTGS1P23219 599 aa17.09■□□□□ 0.33
ATRN-202ENST00000446916 TTLL7Q6ZT98 887 aa17.09■□□□□ 0.33
ATRN-202ENST00000446916 C10orf67Q8IYJ2 551 aa17.09■□□□□ 0.33
ATRN-202ENST00000446916 GLRX3O76003 335 aaKnown RBP17.09■□□□□ 0.33
ATRN-202ENST00000446916 TEX13AQ9BXU3 409 aaPredicted RBP17.09■□□□□ 0.33
ATRN-202ENST00000446916 DCTPP1Q9H773 170 aa17.09■□□□□ 0.33
ATRN-202ENST00000446916 NIP7Q9Y221 180 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATRN-202ENST00000446916 MYO5BQ9ULV0 1848 aa17.09■□□□□ 0.33
ATRN-202ENST00000446916 SIGLEC1Q9BZZ2 1709 aa17.09■□□□□ 0.33
ATRN-202ENST00000446916 PDE1AP54750 535 aa17.08■□□□□ 0.33
ATRN-202ENST00000446916 RRP12Q5JTH9 1297 aaKnown RBP17.08■□□□□ 0.33
ATRN-202ENST00000446916 MNS1Q8NEH6 495 aa17.08■□□□□ 0.33
ATRN-202ENST00000446916 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.33
ATRN-202ENST00000446916 ZNF445P59923 1031 aa17.08■□□□□ 0.32
ATRN-202ENST00000446916 LRRFIP1Q32MZ4 808 aaKnown RBP17.08■□□□□ 0.32
ATRN-202ENST00000446916 PYCARDQ9ULZ3 195 aa17.08■□□□□ 0.32
ATRN-202ENST00000446916 TERF1P54274 439 aa17.08■□□□□ 0.32
ATRN-202ENST00000446916 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms