RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ATCAYQ86WG3 371 aa7.88□□□□□ -1.15
HMGB1P48-201ENST00000446155 CEP63Q96MT8 703 aa7.88□□□□□ -1.15
HMGB1P48-201ENST00000446155 GZF1Q9H116 711 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P48-201ENST00000446155 BRD7Q9NPI1 651 aa7.88□□□□□ -1.15
HMGB1P48-201ENST00000446155 DCDC2BA2VCK2 349 aa7.87□□□□□ -1.15
HMGB1P48-201ENST00000446155 SFSWAPQ12872 951 aaKnown RBP7.87□□□□□ -1.15
HMGB1P48-201ENST00000446155 LCE2AQ5TA79 106 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P48-201ENST00000446155 KHNYNO15037 678 aaKnown RBP7.86□□□□□ -1.15
HMGB1P48-201ENST00000446155 FAM182BQ5T319 152 aa7.86□□□□□ -1.15
HMGB1P48-201ENST00000446155 ZNF775Q96BV0 537 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P48-201ENST00000446155 C11orf16Q9NQ32 467 aa7.86□□□□□ -1.15
HMGB1P48-201ENST00000446155 KCNMB2Q9Y691 235 aa7.86□□□□□ -1.15
HMGB1P48-201ENST00000446155 MZF1P28698 734 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P48-201ENST00000446155 GRIN2CQ14957 1233 aa7.85□□□□□ -1.15
HMGB1P48-201ENST00000446155 TRERF1Q96PN7 1200 aa7.85□□□□□ -1.15
HMGB1P48-201ENST00000446155 CCDC87Q9NVE4 849 aa7.85□□□□□ -1.15
HMGB1P48-201ENST00000446155 PHF24Q9UPV7 400 aa7.85□□□□□ -1.15
HMGB1P48-201ENST00000446155 KCNH4Q9UQ05 1017 aa7.85□□□□□ -1.15
HMGB1P48-201ENST00000446155 RTCBQ9Y3I0 505 aaKnown RBP7.85□□□□□ -1.15
HMGB1P48-201ENST00000446155 EGFRP00533 1210 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 IGHA2P01877 340 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 PDGFAP04085 211 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 FGFR3P22607 806 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 KRT76Q01546 638 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 TRIP4Q15650 581 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 RNFT1Q5M7Z0 435 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 FOXR1Q6PIV2 292 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 GPR152Q8TDT2 470 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 SLC16A10Q8TF71 515 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 EDEM1Q92611 657 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 IRF7Q92985 503 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 FAM13BQ9NYF5 915 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 MARK1Q9P0L2 795 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 USP20Q9Y2K6 914 aa7.84□□□□□ -1.15
HMGB1P48-201ENST00000446155 C2CD2LO14523 706 aa7.83□□□□□ -1.16
HMGB1P48-201ENST00000446155 CD33P20138 364 aa7.83□□□□□ -1.16
HMGB1P48-201ENST00000446155 CTBSQ01459 385 aa7.83□□□□□ -1.16
HMGB1P48-201ENST00000446155 RGL4Q8IZJ4 473 aa7.83□□□□□ -1.16
HMGB1P48-201ENST00000446155 GJD3Q8N144 294 aa7.83□□□□□ -1.16
HMGB1P48-201ENST00000446155 EPB42P16452 691 aa7.82□□□□□ -1.16
HMGB1P48-201ENST00000446155 PIK3R5Q8WYR1 880 aa7.82□□□□□ -1.16
HMGB1P48-201ENST00000446155 NUDT16Q96DE0 195 aaKnown RBP7.82□□□□□ -1.16
HMGB1P48-201ENST00000446155 COL25A1Q9BXS0 654 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P48-201ENST00000446155 RBCK1Q9BYM8 510 aa7.82□□□□□ -1.16
HMGB1P48-201ENST00000446155 BIN2Q9UBW5 565 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P48-201ENST00000446155 POLIQ9UNA4 740 aa7.82□□□□□ -1.16
HMGB1P48-201ENST00000446155 WFS1O76024 890 aa7.81□□□□□ -1.16
HMGB1P48-201ENST00000446155 DNM1Q05193 864 aaKnown RBP7.81□□□□□ -1.16
HMGB1P48-201ENST00000446155 TREML4Q6UXN2 200 aa7.81□□□□□ -1.16
HMGB1P48-201ENST00000446155 CITED4Q96RK1 184 aa7.81□□□□□ -1.16
HMGB1P48-201ENST00000446155 FAM129BQ96TA1 746 aa7.81□□□□□ -1.16
HMGB1P48-201ENST00000446155 SLC30A3Q99726 388 aa7.81□□□□□ -1.16
HMGB1P48-201ENST00000446155 GSX2Q9BZM3 304 aa7.81□□□□□ -1.16
HMGB1P48-201ENST00000446155 GGNBP2Q9H3C7 697 aa7.81□□□□□ -1.16
HMGB1P48-201ENST00000446155 MBIPQ9NS73 344 aa7.81□□□□□ -1.16
HMGB1P48-201ENST00000446155 DCTN4Q9UJW0 460 aa7.81□□□□□ -1.16
HMGB1P48-201ENST00000446155 SPEM2Q0P670 501 aa7.8□□□□□ -1.16
HMGB1P48-201ENST00000446155 CMTR1Q8N1G2 835 aaKnown RBP7.8□□□□□ -1.16
HMGB1P48-201ENST00000446155 NDUFB5O43674 189 aa7.79□□□□□ -1.16
HMGB1P48-201ENST00000446155 MX2P20592 715 aa7.79□□□□□ -1.16
HMGB1P48-201ENST00000446155 USP5P45974 858 aa7.79□□□□□ -1.16
HMGB1P48-201ENST00000446155 XKR5Q6UX68 686 aa7.79□□□□□ -1.16
HMGB1P48-201ENST00000446155 DNAJC14Q6Y2X3 702 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P48-201ENST00000446155 BRPF3Q9ULD4 1205 aa7.79□□□□□ -1.16
HMGB1P48-201ENST00000446155 XYLBO75191 536 aa7.78□□□□□ -1.16
HMGB1P48-201ENST00000446155 RPLP1P05386 114 aaKnown RBP7.78□□□□□ -1.16
HMGB1P48-201ENST00000446155 GMPRP36959 345 aa7.78□□□□□ -1.16
HMGB1P48-201ENST00000446155 MARSP56192 900 aaKnown RBP7.78□□□□□ -1.16
HMGB1P48-201ENST00000446155 CCINQ13939 588 aa7.78□□□□□ -1.16
HMGB1P48-201ENST00000446155 MDFIQ99750 246 aa7.78□□□□□ -1.16
HMGB1P48-201ENST00000446155 EFCC1Q9HA90 598 aa7.78□□□□□ -1.16
HMGB1P48-201ENST00000446155 AVENQ9NQS1 362 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P48-201ENST00000446155 ZFATQ9P243 1243 aa7.78□□□□□ -1.16
HMGB1P48-201ENST00000446155 UBAP1LF5GYI3 381 aa7.77□□□□□ -1.17
HMGB1P48-201ENST00000446155 SRSF11Q05519 484 aaKnown RBP7.77□□□□□ -1.17
HMGB1P48-201ENST00000446155 AAMPQ13685 434 aa7.77□□□□□ -1.17
HMGB1P48-201ENST00000446155 CCDC27Q2M243 656 aa7.77□□□□□ -1.17
HMGB1P48-201ENST00000446155 TMCO4Q5TGY1 634 aa7.77□□□□□ -1.17
HMGB1P48-201ENST00000446155 ZNF468Q5VIY5 522 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P48-201ENST00000446155 PDE12Q6L8Q7 609 aaKnown RBP7.77□□□□□ -1.17
HMGB1P48-201ENST00000446155 ASB16Q96NS5 453 aa7.77□□□□□ -1.17
HMGB1P48-201ENST00000446155 KLF15Q9UIH9 416 aa7.77□□□□□ -1.17
HMGB1P48-201ENST00000446155 IGF1RP08069 1367 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 A6NHS1 94 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 GPR182O15218 404 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 MAP3K6O95382 1288 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 ARAFP10398 606 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 BMP4P12644 408 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 PCSK2P16519 638 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 MAPK1P28482 360 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 MAP2K3P46734 347 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 TMC7Q7Z402 723 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 CNTNAP3BQ96NU0 1288 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 CNTNAP3Q9BZ76 1288 aa7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 FNDC3AQ9Y2H6 1198 aaKnown RBP7.76□□□□□ -1.17
HMGB1P48-201ENST00000446155 SASH3O75995 380 aa7.75□□□□□ -1.17
HMGB1P48-201ENST00000446155 SLURP2P0DP57 97 aa7.75□□□□□ -1.17
HMGB1P48-201ENST00000446155 EHHADHQ08426 723 aa7.75□□□□□ -1.17
HMGB1P48-201ENST00000446155 DSC3Q14574 896 aa7.75□□□□□ -1.17
HMGB1P48-201ENST00000446155 NLRP13Q86W25 1043 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms