RNA–Protein interactions for RNA: ENST00000445924.5

ARPC1B-210, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-210ENST00000445924 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
ARPC1B-210ENST00000445924 ZNF34Q8IZ26 560 aa17.48■□□□□ 0.39
ARPC1B-210ENST00000445924 ANKRD44Q8N8A2 993 aa17.48■□□□□ 0.39
ARPC1B-210ENST00000445924 NIP7Q9Y221 180 aaKnown RBP eCLIP17.48■□□□□ 0.39
ARPC1B-210ENST00000445924 H7C1W4 665 aa17.47■□□□□ 0.39
ARPC1B-210ENST00000445924 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
ARPC1B-210ENST00000445924 CEP85Q6P2H3 762 aa17.47■□□□□ 0.39
ARPC1B-210ENST00000445924 UBE3BQ7Z3V4 1068 aa17.47■□□□□ 0.39
ARPC1B-210ENST00000445924 NLRP10Q86W26 655 aa17.47■□□□□ 0.39
ARPC1B-210ENST00000445924 AKT1S1Q96B36 256 aa17.47■□□□□ 0.39
ARPC1B-210ENST00000445924 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
ARPC1B-210ENST00000445924 ZBTB38Q8NAP3 1195 aaPredicted RBP17.46■□□□□ 0.39
ARPC1B-210ENST00000445924 TRMT112Q9UI30 125 aaKnown RBP17.46■□□□□ 0.39
ARPC1B-210ENST00000445924 TUBGCP6Q96RT7 1819 aa17.46■□□□□ 0.39
ARPC1B-210ENST00000445924 QSER1Q2KHR3 1735 aa17.46■□□□□ 0.39
ARPC1B-210ENST00000445924 MSH5O43196 834 aa17.45■□□□□ 0.38
ARPC1B-210ENST00000445924 ATP8B2P98198 1209 aa17.45■□□□□ 0.38
ARPC1B-210ENST00000445924 SUCLG2Q96I99 432 aa17.45■□□□□ 0.38
ARPC1B-210ENST00000445924 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
ARPC1B-210ENST00000445924 UTP14AQ9BVJ6 771 aaKnown RBP17.45■□□□□ 0.38
ARPC1B-210ENST00000445924 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
ARPC1B-210ENST00000445924 ZNF827Q17R98 1081 aa17.44■□□□□ 0.38
ARPC1B-210ENST00000445924 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
ARPC1B-210ENST00000445924 GCC1Q96CN9 775 aa17.44■□□□□ 0.38
ARPC1B-210ENST00000445924 NYXQ9GZU5 481 aa17.44■□□□□ 0.38
ARPC1B-210ENST00000445924 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
ARPC1B-210ENST00000445924 CDHR2Q9BYE9 1310 aa17.44■□□□□ 0.38
ARPC1B-210ENST00000445924 MYH3P11055 1940 aa17.43■□□□□ 0.38
ARPC1B-210ENST00000445924 IGHDP01880 384 aa17.43■□□□□ 0.38
ARPC1B-210ENST00000445924 SLC15A2Q16348 729 aa17.43■□□□□ 0.38
ARPC1B-210ENST00000445924 SMIM5Q71RC9 77 aa17.43■□□□□ 0.38
ARPC1B-210ENST00000445924 UBN2Q6ZU65 1347 aa17.43■□□□□ 0.38
ARPC1B-210ENST00000445924 KDM2BQ8NHM5 1336 aa17.43■□□□□ 0.38
ARPC1B-210ENST00000445924 SH3TC1Q8TE82 1336 aa17.43■□□□□ 0.38
ARPC1B-210ENST00000445924 NPHP1O15259 732 aa17.42■□□□□ 0.38
ARPC1B-210ENST00000445924 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
ARPC1B-210ENST00000445924 GTF2E1P29083 439 aaPredicted RBP17.42■□□□□ 0.38
ARPC1B-210ENST00000445924 CASP7P55210 303 aa17.42■□□□□ 0.38
ARPC1B-210ENST00000445924 RTL5Q5HYW3 569 aaPredicted RBP17.42■□□□□ 0.38
ARPC1B-210ENST00000445924 TBC1D9BQ66K14 1250 aa17.42■□□□□ 0.38
ARPC1B-210ENST00000445924 BICDL1Q6ZP65 573 aa17.42■□□□□ 0.38
ARPC1B-210ENST00000445924 AMIGO3Q86WK7 504 aa17.42■□□□□ 0.38
ARPC1B-210ENST00000445924 PELP1Q8IZL8 1130 aaKnown RBP17.42■□□□□ 0.38
ARPC1B-210ENST00000445924 FAM89AQ96GI7 184 aa17.42■□□□□ 0.38
ARPC1B-210ENST00000445924 BICC1Q9H694 974 aaKnown RBP17.42■□□□□ 0.38
ARPC1B-210ENST00000445924 COL24A1Q17RW2 1714 aa17.41■□□□□ 0.38
ARPC1B-210ENST00000445924 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
ARPC1B-210ENST00000445924 MTX1Q13505 466 aa17.41■□□□□ 0.38
ARPC1B-210ENST00000445924 SUSD4Q5VX71 490 aa17.41■□□□□ 0.38
ARPC1B-210ENST00000445924 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
ARPC1B-210ENST00000445924 BCL2L12Q9HB09 334 aa17.41■□□□□ 0.38
ARPC1B-210ENST00000445924 CARMIL3Q8ND23 1372 aa17.4■□□□□ 0.38
ARPC1B-210ENST00000445924 LAMB2P55268 1798 aa17.4■□□□□ 0.38
ARPC1B-210ENST00000445924 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
ARPC1B-210ENST00000445924 HSP90AB4PQ58FF6 505 aa17.4■□□□□ 0.38
ARPC1B-210ENST00000445924 TPTE2Q6XPS3 522 aa17.4■□□□□ 0.38
ARPC1B-210ENST00000445924 NBPF5PQ86XG9 351 aaPredicted RBP17.4■□□□□ 0.38
ARPC1B-210ENST00000445924 SIRT2Q8IXJ6 389 aa17.4■□□□□ 0.38
ARPC1B-210ENST00000445924 PLA2G12BQ9BX93 195 aa17.4■□□□□ 0.38
ARPC1B-210ENST00000445924 PDE8AO60658 829 aa17.39■□□□□ 0.37
ARPC1B-210ENST00000445924 GYS1P13807 737 aa17.39■□□□□ 0.37
ARPC1B-210ENST00000445924 COL23A1Q86Y22 540 aaPredicted RBP17.39■□□□□ 0.37
ARPC1B-210ENST00000445924 NLGN1Q8N2Q7 840 aa17.39■□□□□ 0.37
ARPC1B-210ENST00000445924 SSH3Q8TE77 659 aa17.39■□□□□ 0.37
ARPC1B-210ENST00000445924 CHMP3Q9Y3E7 222 aa17.39■□□□□ 0.37
ARPC1B-210ENST00000445924 PNMA6EA0A0J9YXQ4 647 aa17.38■□□□□ 0.37
ARPC1B-210ENST00000445924 NTSR2O95665 410 aa17.38■□□□□ 0.37
ARPC1B-210ENST00000445924 POLA2Q14181 598 aa17.38■□□□□ 0.37
ARPC1B-210ENST00000445924 RABL6Q3YEC7 729 aaPredicted RBP17.38■□□□□ 0.37
ARPC1B-210ENST00000445924 SMC5Q8IY18 1101 aa17.38■□□□□ 0.37
ARPC1B-210ENST00000445924 UPF1Q92900 1129 aaKnown RBP eCLIP17.38■□□□□ 0.37
ARPC1B-210ENST00000445924 DCTPP1Q9H773 170 aa17.38■□□□□ 0.37
ARPC1B-210ENST00000445924 PNPLA7Q6ZV29 1317 aa17.38■□□□□ 0.37
ARPC1B-210ENST00000445924 LMBR1LQ6UX01 489 aa17.37■□□□□ 0.37
ARPC1B-210ENST00000445924 KAZALD1Q96I82 304 aa17.37■□□□□ 0.37
ARPC1B-210ENST00000445924 DDX60Q8IY21 1712 aaKnown RBP17.36■□□□□ 0.37
ARPC1B-210ENST00000445924 FOXO4P98177 505 aa17.36■□□□□ 0.37
ARPC1B-210ENST00000445924 OS9Q13438 667 aaPredicted RBP17.36■□□□□ 0.37
ARPC1B-210ENST00000445924 NFIXQ14938 502 aa17.36■□□□□ 0.37
ARPC1B-210ENST00000445924 ANO8Q9HCE9 1232 aaPredicted RBP17.36■□□□□ 0.37
ARPC1B-210ENST00000445924 RAB11FIP3O75154 756 aa17.35■□□□□ 0.37
ARPC1B-210ENST00000445924 SURF6O75683 361 aaKnown RBP17.35■□□□□ 0.37
ARPC1B-210ENST00000445924 CTSWP56202 376 aa17.35■□□□□ 0.37
ARPC1B-210ENST00000445924 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
ARPC1B-210ENST00000445924 EPHA10Q5JZY3 1008 aa17.35■□□□□ 0.37
ARPC1B-210ENST00000445924 CNBD1Q8NA66 436 aa17.35■□□□□ 0.37
ARPC1B-210ENST00000445924 ST5P78524 1137 aa17.34■□□□□ 0.37
ARPC1B-210ENST00000445924 G3BP1Q13283 466 aaKnown RBP eCLIP17.34■□□□□ 0.37
ARPC1B-210ENST00000445924 TAF7LQ5H9L4 462 aa17.34■□□□□ 0.37
ARPC1B-210ENST00000445924 ANKRD45Q5TZF3 282 aa17.34■□□□□ 0.37
ARPC1B-210ENST00000445924 NUTM1Q86Y26 1132 aa17.34■□□□□ 0.37
ARPC1B-210ENST00000445924 ERC1Q8IUD2 1116 aa17.34■□□□□ 0.37
ARPC1B-210ENST00000445924 CSF1RP07333 972 aa17.33■□□□□ 0.36
ARPC1B-210ENST00000445924 TM4SF1P30408 202 aa17.33■□□□□ 0.36
ARPC1B-210ENST00000445924 IFIT5Q13325 482 aaKnown RBP17.33■□□□□ 0.36
ARPC1B-210ENST00000445924 ERFEQ4G0M1 354 aa17.33■□□□□ 0.36
ARPC1B-210ENST00000445924 CCDC152Q4G0S7 254 aa17.33■□□□□ 0.36
ARPC1B-210ENST00000445924 PDZRN3Q9UPQ7 1066 aa17.33■□□□□ 0.36
ARPC1B-210ENST00000445924 PARP3Q9Y6F1 533 aa17.33■□□□□ 0.36
ARPC1B-210ENST00000445924 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 250.4 ms