RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 NBPF5PQ86XG9 351 aaPredicted RBP21.92■■□□□ 1.1
SGCE-206ENST00000445866 FAM89AQ96GI7 184 aa21.92■■□□□ 1.1
SGCE-206ENST00000445866 CHMP4BQ9H444 224 aaKnown RBP21.92■■□□□ 1.1
SGCE-206ENST00000445866 ZBTB7AO95365 584 aa21.91■■□□□ 1.1
SGCE-206ENST00000445866 GTF2E1P29083 439 aaPredicted RBP21.91■■□□□ 1.1
SGCE-206ENST00000445866 TPTE2Q6XPS3 522 aa21.91■■□□□ 1.1
SGCE-206ENST00000445866 EXOC6Q8TAG9 804 aa21.91■■□□□ 1.1
SGCE-206ENST00000445866 MEIS3Q99687 375 aa21.91■■□□□ 1.1
SGCE-206ENST00000445866 H7C1W4 665 aa21.91■■□□□ 1.1
SGCE-206ENST00000445866 NPHP1O15259 732 aa21.91■■□□□ 1.1
SGCE-206ENST00000445866 GNAI3P08754 354 aa21.91■■□□□ 1.1
SGCE-206ENST00000445866 MMP10P09238 476 aa21.91■■□□□ 1.1
SGCE-206ENST00000445866 ZBTB38Q8NAP3 1195 aaPredicted RBP21.91■■□□□ 1.1
SGCE-206ENST00000445866 TAF1LQ8IZX4 1826 aa21.9■■□□□ 1.1
SGCE-206ENST00000445866 SERPINB2P05120 415 aa21.9■■□□□ 1.1
SGCE-206ENST00000445866 NBPF7P0C2Y1 421 aaPredicted RBP21.9■■□□□ 1.1
SGCE-206ENST00000445866 NYXQ9GZU5 481 aa21.9■■□□□ 1.1
SGCE-206ENST00000445866 ATF5Q9Y2D1 282 aaPredicted RBP21.9■■□□□ 1.1
SGCE-206ENST00000445866 PARP3Q9Y6F1 533 aa21.9■■□□□ 1.1
SGCE-206ENST00000445866 PCCAP05165 728 aaPredicted RBP21.89■■□□□ 1.1
SGCE-206ENST00000445866 UBTFL1P0CB47 393 aaPredicted RBP21.89■■□□□ 1.1
SGCE-206ENST00000445866 UBE3BQ7Z3V4 1068 aa21.89■■□□□ 1.1
SGCE-206ENST00000445866 SYNE4Q8N205 404 aa21.89■■□□□ 1.1
SGCE-206ENST00000445866 DDR1Q08345 913 aa21.88■■□□□ 1.09
SGCE-206ENST00000445866 POLRMTO00411 1230 aaKnown RBP21.88■■□□□ 1.09
SGCE-206ENST00000445866 NTSR2O95665 410 aa21.88■■□□□ 1.09
SGCE-206ENST00000445866 NUTM1Q86Y26 1132 aa21.88■■□□□ 1.09
SGCE-206ENST00000445866 MTFR1LQ9H019 292 aa21.88■■□□□ 1.09
SGCE-206ENST00000445866 ZBTB40Q9NUA8 1239 aa21.88■■□□□ 1.09
SGCE-206ENST00000445866 HDAC5Q9UQL6 1122 aa21.87■■□□□ 1.09
SGCE-206ENST00000445866 PXDNLA1KZ92 1463 aa21.86■■□□□ 1.09
SGCE-206ENST00000445866 SH3TC1Q8TE82 1336 aa21.86■■□□□ 1.09
SGCE-206ENST00000445866 NUP188Q5SRE5 1749 aa21.86■■□□□ 1.09
SGCE-206ENST00000445866 ERFEQ4G0M1 354 aa21.86■■□□□ 1.09
SGCE-206ENST00000445866 CARMIL3Q8ND23 1372 aa21.86■■□□□ 1.09
SGCE-206ENST00000445866 UTYO14607 1347 aa21.86■■□□□ 1.09
SGCE-206ENST00000445866 IRS4O14654 1257 aaPredicted RBP21.85■■□□□ 1.09
SGCE-206ENST00000445866 GNAI2P04899 355 aa21.85■■□□□ 1.09
SGCE-206ENST00000445866 CASP7P55210 303 aa21.85■■□□□ 1.09
SGCE-206ENST00000445866 CCDC24Q8N4L8 307 aa21.85■■□□□ 1.09
SGCE-206ENST00000445866 CNBD1Q8NA66 436 aa21.85■■□□□ 1.09
SGCE-206ENST00000445866 HCLS1P14317 486 aaPredicted RBP21.85■■□□□ 1.09
SGCE-206ENST00000445866 IBTKQ9P2D0 1353 aaPredicted RBP21.84■■□□□ 1.09
SGCE-206ENST00000445866 HSP90B1P14625 803 aaKnown RBP21.83■■□□□ 1.09
SGCE-206ENST00000445866 POLD1P28340 1107 aa21.83■■□□□ 1.09
SGCE-206ENST00000445866 SUCLG2Q96I99 432 aa21.83■■□□□ 1.09
SGCE-206ENST00000445866 C1orf115Q9H7X2 142 aa21.83■■□□□ 1.09
SGCE-206ENST00000445866 LRRFIP2Q9Y608 721 aaKnown RBP21.83■■□□□ 1.09
SGCE-206ENST00000445866 UBR3Q6ZT12 1888 aa21.83■■□□□ 1.08
SGCE-206ENST00000445866 SLC10A5Q5PT55 438 aa21.82■■□□□ 1.08
SGCE-206ENST00000445866 PRR5LQ6MZQ0 368 aa21.82■■□□□ 1.08
SGCE-206ENST00000445866 ST5P78524 1137 aa21.82■■□□□ 1.08
SGCE-206ENST00000445866 AAMPQ13685 434 aa21.82■■□□□ 1.08
SGCE-206ENST00000445866 CDHR2Q9BYE9 1310 aa21.81■■□□□ 1.08
SGCE-206ENST00000445866 PDE8AO60658 829 aa21.8■■□□□ 1.08
SGCE-206ENST00000445866 KAZALD1Q96I82 304 aa21.8■■□□□ 1.08
SGCE-206ENST00000445866 CACNA1FO60840 1977 aa21.79■■□□□ 1.08
SGCE-206ENST00000445866 EPHA10Q5JZY3 1008 aa21.79■■□□□ 1.08
SGCE-206ENST00000445866 NLRP3Q96P20 1036 aa21.79■■□□□ 1.08
SGCE-206ENST00000445866 BICC1Q9H694 974 aaKnown RBP21.79■■□□□ 1.08
SGCE-206ENST00000445866 FOXO4P98177 505 aa21.79■■□□□ 1.08
SGCE-206ENST00000445866 PLA2G12BQ9BX93 195 aa21.79■■□□□ 1.08
SGCE-206ENST00000445866 SPON1Q9HCB6 807 aa21.79■■□□□ 1.08
SGCE-206ENST00000445866 LMBR1LQ6UX01 489 aa21.78■■□□□ 1.08
SGCE-206ENST00000445866 BRIP1Q9BX63 1249 aa21.77■■□□□ 1.08
SGCE-206ENST00000445866 CCDC85AQ96PX6 553 aaPredicted RBP21.76■■□□□ 1.07
SGCE-206ENST00000445866 CHMP3Q9Y3E7 222 aa21.76■■□□□ 1.07
SGCE-206ENST00000445866 PCDHB15Q9Y5E8 787 aa21.76■■□□□ 1.07
SGCE-206ENST00000445866 CTSWP56202 376 aa21.75■■□□□ 1.07
SGCE-206ENST00000445866 RPAP2Q8IXW5 612 aaPredicted RBP21.75■■□□□ 1.07
SGCE-206ENST00000445866 ANKRD44Q8N8A2 993 aa21.75■■□□□ 1.07
SGCE-206ENST00000445866 TTLL11Q8NHH1 800 aa21.75■■□□□ 1.07
SGCE-206ENST00000445866 CSF1RP07333 972 aa21.75■■□□□ 1.07
SGCE-206ENST00000445866 PTGER2P43116 358 aa21.75■■□□□ 1.07
SGCE-206ENST00000445866 ATP8B2P98198 1209 aa21.75■■□□□ 1.07
SGCE-206ENST00000445866 ERICH6BQ5W0A0 696 aa21.75■■□□□ 1.07
SGCE-206ENST00000445866 C3orf67Q6ZVT6 689 aa21.75■■□□□ 1.07
SGCE-206ENST00000445866 CEP85Q6P2H3 762 aa21.74■■□□□ 1.07
SGCE-206ENST00000445866 SGIP1Q9BQI5 828 aa21.74■■□□□ 1.07
SGCE-206ENST00000445866 ABCC12Q96J65 1359 aa21.73■■□□□ 1.07
SGCE-206ENST00000445866 SF3B3Q15393 1217 aaKnown RBP21.73■■□□□ 1.07
SGCE-206ENST00000445866 RABL6Q3YEC7 729 aaPredicted RBP21.73■■□□□ 1.07
SGCE-206ENST00000445866 CCDC152Q4G0S7 254 aa21.73■■□□□ 1.07
SGCE-206ENST00000445866 SRGAP3O43295 1099 aa21.72■■□□□ 1.07
SGCE-206ENST00000445866 PDE6BP35913 854 aa21.72■■□□□ 1.07
SGCE-206ENST00000445866 ARFGEF2Q9Y6D5 1785 aa21.72■■□□□ 1.07
SGCE-206ENST00000445866 C4AP0C0L4 1744 aa21.72■■□□□ 1.07
SGCE-206ENST00000445866 PPP1R1BQ9UD71 204 aaPredicted RBP21.72■■□□□ 1.07
SGCE-206ENST00000445866 SCN7AQ01118 1682 aa21.71■■□□□ 1.07
SGCE-206ENST00000445866 PNMA6EA0A0J9YXQ4 647 aa21.71■■□□□ 1.07
SGCE-206ENST00000445866 CCDC57Q2TAC2 916 aa21.71■■□□□ 1.07
SGCE-206ENST00000445866 SIRT2Q8IXJ6 389 aa21.71■■□□□ 1.07
SGCE-206ENST00000445866 GREM2Q9H772 168 aa21.71■■□□□ 1.07
SGCE-206ENST00000445866 IFIT5Q13325 482 aaKnown RBP21.7■■□□□ 1.06
SGCE-206ENST00000445866 MTX1Q13505 466 aa21.7■■□□□ 1.06
SGCE-206ENST00000445866 KLRG2A4D1S0 409 aaPredicted RBP21.69■■□□□ 1.06
SGCE-206ENST00000445866 HMMRO75330 724 aa21.69■■□□□ 1.06
SGCE-206ENST00000445866 RPGRQ92834 1020 aaKnown RBP21.69■■□□□ 1.06
SGCE-206ENST00000445866 TUBGCP6Q96RT7 1819 aa21.69■■□□□ 1.06
SGCE-206ENST00000445866 H0YIN7 160 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms