RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 SASH1O94885 1247 aa25.93■■□□□ 1.74
SKIDA1-201ENST00000444772 SUCLG2Q96I99 432 aa25.93■■□□□ 1.74
SKIDA1-201ENST00000444772 ALDH8A1Q9H2A2 487 aaPredicted RBP25.93■■□□□ 1.74
SKIDA1-201ENST00000444772 KCNJ4P48050 445 aa25.93■■□□□ 1.74
SKIDA1-201ENST00000444772 PDCP20941 246 aa25.92■■□□□ 1.74
SKIDA1-201ENST00000444772 EAF2Q96CJ1 260 aaPredicted RBP25.92■■□□□ 1.74
SKIDA1-201ENST00000444772 KAZALD1Q96I82 304 aa25.92■■□□□ 1.74
SKIDA1-201ENST00000444772 BICC1Q9H694 974 aaKnown RBP25.92■■□□□ 1.74
SKIDA1-201ENST00000444772 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.92■■□□□ 1.74
SKIDA1-201ENST00000444772 ME3Q16798 604 aa25.91■■□□□ 1.74
SKIDA1-201ENST00000444772 LARP1Q6PKG0 1096 aaKnown RBP25.91■■□□□ 1.74
SKIDA1-201ENST00000444772 NMIQ13287 307 aaPredicted RBP25.91■■□□□ 1.74
SKIDA1-201ENST00000444772 MAP7D2Q96T17 732 aa25.91■■□□□ 1.74
SKIDA1-201ENST00000444772 DNM1Q05193 864 aaKnown RBP25.9■■□□□ 1.74
SKIDA1-201ENST00000444772 SASS6Q6UVJ0 657 aa25.9■■□□□ 1.74
SKIDA1-201ENST00000444772 FUCA2Q9BTY2 467 aa25.9■■□□□ 1.74
SKIDA1-201ENST00000444772 HMG20BQ9P0W2 317 aa25.9■■□□□ 1.74
SKIDA1-201ENST00000444772 MRC1P22897 1456 aa25.89■■□□□ 1.74
SKIDA1-201ENST00000444772 SLC27A2O14975 620 aa25.89■■□□□ 1.74
SKIDA1-201ENST00000444772 USP25Q9UHP3 1055 aa25.89■■□□□ 1.74
SKIDA1-201ENST00000444772 HCLS1P14317 486 aaPredicted RBP25.89■■□□□ 1.73
SKIDA1-201ENST00000444772 NEXNQ0ZGT2 675 aa25.89■■□□□ 1.73
SKIDA1-201ENST00000444772 FAM227BQ96M60 508 aa25.89■■□□□ 1.73
SKIDA1-201ENST00000444772 ST3GAL1Q11201 340 aa25.88■■□□□ 1.73
SKIDA1-201ENST00000444772 ELP1O95163 1332 aa25.88■■□□□ 1.73
SKIDA1-201ENST00000444772 KDM4AO75164 1064 aa25.88■■□□□ 1.73
SKIDA1-201ENST00000444772 ADCY5O95622 1261 aa25.88■■□□□ 1.73
SKIDA1-201ENST00000444772 PDIA6Q15084 440 aa25.88■■□□□ 1.73
SKIDA1-201ENST00000444772 TSGA10IPQ3SY00 556 aa25.88■■□□□ 1.73
SKIDA1-201ENST00000444772 TPCN1Q9ULQ1 816 aa25.88■■□□□ 1.73
SKIDA1-201ENST00000444772 MED23Q9ULK4 1368 aa25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 DYNC1I1O14576 645 aa25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 BLOC1S2Q6QNY1 142 aa25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 JCADQ9P266 1359 aa25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 UQCRHLA0A096LP55 91 aa25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 PRAMEF22A3QJZ6 481 aa25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 VPS37CA5D8V6 355 aaPredicted RBP25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 UQCRHP07919 91 aa25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 KRT85P78386 507 aa25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 LARP1BQ659C4 914 aaKnown RBP25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 RIC3Q7Z5B4 369 aa25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 FSD1Q9BTV5 496 aa25.87■■□□□ 1.73
SKIDA1-201ENST00000444772 CCDC8Q9H0W5 538 aaPredicted RBP25.86■■□□□ 1.73
SKIDA1-201ENST00000444772 ZNF142P52746 1687 aaPredicted RBP25.86■■□□□ 1.73
SKIDA1-201ENST00000444772 PIBF1Q8WXW3 757 aa25.85■■□□□ 1.73
SKIDA1-201ENST00000444772 IGKV5-2P06315 115 aa25.85■■□□□ 1.73
SKIDA1-201ENST00000444772 RPS6KB1P23443 525 aa25.84■■□□□ 1.73
SKIDA1-201ENST00000444772 NPHP4O75161 1426 aaPredicted RBP25.84■■□□□ 1.73
SKIDA1-201ENST00000444772 A0A0D9SFI3 127 aa25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 NEURL1BA8MQ27 555 aa25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 TPM3P06753 285 aa25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 CCDC192P0DO97 292 aa25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 AIMP1Q12904 312 aaKnown RBP25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 KRT32Q14532 448 aa25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 ZNF790Q6PG37 636 aa25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 MTERF4Q7Z6M4 381 aaKnown RBP25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 NECAB1Q8N987 351 aa25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 BOLA2Q9H3K6 86 aa25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 GCKRQ14397 625 aa25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 RFX7Q2KHR2 1363 aa25.83■■□□□ 1.73
SKIDA1-201ENST00000444772 GIMAP6Q6P9H5 292 aa25.82■■□□□ 1.72
SKIDA1-201ENST00000444772 RBM33Q96EV2 1170 aaKnown RBP25.82■■□□□ 1.72
SKIDA1-201ENST00000444772 METTL22Q9BUU2 404 aaPredicted RBP25.81■■□□□ 1.72
SKIDA1-201ENST00000444772 SCAND2PQ9GZW5 306 aaPredicted RBP25.81■■□□□ 1.72
SKIDA1-201ENST00000444772 COPRSQ9NQ92 184 aa25.81■■□□□ 1.72
SKIDA1-201ENST00000444772 TLR7Q9NYK1 1049 aaKnown RBP25.81■■□□□ 1.72
SKIDA1-201ENST00000444772 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.81■■□□□ 1.72
SKIDA1-201ENST00000444772 MST1RQ04912 1400 aa25.81■■□□□ 1.72
SKIDA1-201ENST00000444772 USPL1Q5W0Q7 1092 aa25.81■■□□□ 1.72
SKIDA1-201ENST00000444772 ORAI2Q96SN7 254 aa25.81■■□□□ 1.72
SKIDA1-201ENST00000444772 SLC52A2Q9HAB3 445 aa25.81■■□□□ 1.72
SKIDA1-201ENST00000444772 COL15A1P39059 1388 aa25.8■■□□□ 1.72
SKIDA1-201ENST00000444772 AXIN2Q9Y2T1 843 aa25.8■■□□□ 1.72
SKIDA1-201ENST00000444772 TRPM3Q9HCF6 1732 aaPredicted RBP25.8■■□□□ 1.72
SKIDA1-201ENST00000444772 ATP5JP18859 108 aa25.8■■□□□ 1.72
SKIDA1-201ENST00000444772 SIL1Q9H173 461 aa25.8■■□□□ 1.72
SKIDA1-201ENST00000444772 ERBB3P21860 1342 aa25.79■■□□□ 1.72
SKIDA1-201ENST00000444772 PLEKHG2Q9H7P9 1386 aa25.79■■□□□ 1.72
SKIDA1-201ENST00000444772 PRIMPOLQ96LW4 560 aa25.79■■□□□ 1.72
SKIDA1-201ENST00000444772 NOLC1Q14978 699 aaKnown RBP eCLIP25.78■■□□□ 1.72
SKIDA1-201ENST00000444772 TTC6Q86TZ1 520 aa25.78■■□□□ 1.72
SKIDA1-201ENST00000444772 RAPGEF4Q8WZA2 1011 aa25.78■■□□□ 1.72
SKIDA1-201ENST00000444772 SCN11AQ9UI33 1791 aa25.78■■□□□ 1.72
SKIDA1-201ENST00000444772 TAF5LO75529 589 aa25.78■■□□□ 1.72
SKIDA1-201ENST00000444772 HMGN5P82970 282 aaKnown RBP25.78■■□□□ 1.72
SKIDA1-201ENST00000444772 TOB2Q14106 344 aaPredicted RBP25.78■■□□□ 1.72
SKIDA1-201ENST00000444772 CDC37L1Q7L3B6 337 aa25.78■■□□□ 1.72
SKIDA1-201ENST00000444772 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.78■■□□□ 1.72
SKIDA1-201ENST00000444772 NPHP3Q7Z494 1330 aa25.78■■□□□ 1.72
SKIDA1-201ENST00000444772 DDX54Q8TDD1 881 aaKnown RBP25.77■■□□□ 1.72
SKIDA1-201ENST00000444772 XAGE3Q8WTP9 111 aa25.77■■□□□ 1.72
SKIDA1-201ENST00000444772 SPTLC3Q9NUV7 552 aa25.77■■□□□ 1.72
SKIDA1-201ENST00000444772 MAP3K11Q16584 847 aa25.77■■□□□ 1.72
SKIDA1-201ENST00000444772 LMOD2Q6P5Q4 547 aa25.77■■□□□ 1.72
SKIDA1-201ENST00000444772 NUP62CLQ9H1M0 184 aa25.77■■□□□ 1.72
SKIDA1-201ENST00000444772 TPRNQ4KMQ1 711 aa25.76■■□□□ 1.71
SKIDA1-201ENST00000444772 C5P01031 1676 aa25.76■■□□□ 1.71
SKIDA1-201ENST00000444772 ABCC6O95255 1503 aa25.76■■□□□ 1.71
SKIDA1-201ENST00000444772 COPS6Q7L5N1 327 aa25.76■■□□□ 1.71
SKIDA1-201ENST00000444772 KIF1AQ12756 1690 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms