RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 CNTROBQ8N137 903 aa22.58■■□□□ 1.21
PMPCB-204ENST00000444457 MST1RQ04912 1400 aa22.58■■□□□ 1.21
PMPCB-204ENST00000444457 RPAP1Q9BWH6 1393 aaPredicted RBP22.58■■□□□ 1.21
PMPCB-204ENST00000444457 ERBB3P21860 1342 aa22.58■■□□□ 1.21
PMPCB-204ENST00000444457 C9orf78Q9NZ63 289 aaPredicted RBP22.58■■□□□ 1.21
PMPCB-204ENST00000444457 SGSM2O43147 1006 aa22.57■■□□□ 1.2
PMPCB-204ENST00000444457 PROSER2Q86WR7 435 aaPredicted RBP22.57■■□□□ 1.2
PMPCB-204ENST00000444457 OGFRQ9NZT2 677 aa22.57■■□□□ 1.2
PMPCB-204ENST00000444457 PYCARDQ9ULZ3 195 aa22.57■■□□□ 1.2
PMPCB-204ENST00000444457 TTC41PQ6P2S7 1318 aa22.57■■□□□ 1.2
PMPCB-204ENST00000444457 OS9Q13438 667 aaPredicted RBP22.57■■□□□ 1.2
PMPCB-204ENST00000444457 RAD50Q92878 1312 aa22.56■■□□□ 1.2
PMPCB-204ENST00000444457 UPF3BQ9BZI7 483 aaKnown RBP22.56■■□□□ 1.2
PMPCB-204ENST00000444457 HYPKQ9NX55 129 aa22.56■■□□□ 1.2
PMPCB-204ENST00000444457 SCN11AQ9UI33 1791 aa22.56■■□□□ 1.2
PMPCB-204ENST00000444457 SYCP1Q15431 976 aa22.55■■□□□ 1.2
PMPCB-204ENST00000444457 CWF19L2Q2TBE0 894 aaKnown RBP22.55■■□□□ 1.2
PMPCB-204ENST00000444457 NOL8Q76FK4 1167 aaKnown RBP22.55■■□□□ 1.2
PMPCB-204ENST00000444457 FUCA2Q9BTY2 467 aa22.55■■□□□ 1.2
PMPCB-204ENST00000444457 HDAC5Q9UQL6 1122 aa22.55■■□□□ 1.2
PMPCB-204ENST00000444457 GLRX3O76003 335 aaKnown RBP22.54■■□□□ 1.2
PMPCB-204ENST00000444457 FOXD4L6Q3SYB3 417 aaPredicted RBP22.54■■□□□ 1.2
PMPCB-204ENST00000444457 FOXD4L3Q6VB84 417 aaPredicted RBP22.54■■□□□ 1.2
PMPCB-204ENST00000444457 GABPB1Q06547 395 aaPredicted RBP22.54■■□□□ 1.2
PMPCB-204ENST00000444457 CLASRPQ8N2M8 674 aaKnown RBP22.54■■□□□ 1.2
PMPCB-204ENST00000444457 DDX21Q9NR30 783 aaKnown RBP eCLIP22.54■■□□□ 1.2
PMPCB-204ENST00000444457 C5P01031 1676 aa22.54■■□□□ 1.2
PMPCB-204ENST00000444457 ZC3H6P61129 1189 aaKnown RBP22.53■■□□□ 1.2
PMPCB-204ENST00000444457 LSG1Q9H089 658 aaKnown RBP22.53■■□□□ 1.2
PMPCB-204ENST00000444457 TMEM51Q9NW97 253 aa22.53■■□□□ 1.2
PMPCB-204ENST00000444457 UBE2HP62256 183 aa22.53■■□□□ 1.2
PMPCB-204ENST00000444457 NCBP1Q09161 790 aaKnown RBP22.53■■□□□ 1.2
PMPCB-204ENST00000444457 LINS1Q8NG48 757 aa22.53■■□□□ 1.2
PMPCB-204ENST00000444457 C19orf44Q9H6X5 657 aa22.53■■□□□ 1.2
PMPCB-204ENST00000444457 AP5Z1O43299 807 aa22.52■■□□□ 1.2
PMPCB-204ENST00000444457 PA2G4Q9UQ80 394 aaKnown RBP22.52■■□□□ 1.2
PMPCB-204ENST00000444457 IGSF3O75054 1194 aa22.52■■□□□ 1.19
PMPCB-204ENST00000444457 DDX58O95786 925 aaKnown RBP22.52■■□□□ 1.19
PMPCB-204ENST00000444457 ERC1Q8IUD2 1116 aa22.52■■□□□ 1.19
PMPCB-204ENST00000444457 ZNF771Q7L3S4 317 aaPredicted RBP22.51■■□□□ 1.19
PMPCB-204ENST00000444457 UTYO14607 1347 aa22.51■■□□□ 1.19
PMPCB-204ENST00000444457 GRM8O00222 908 aa22.5■■□□□ 1.19
PMPCB-204ENST00000444457 PDIA6Q15084 440 aa22.5■■□□□ 1.19
PMPCB-204ENST00000444457 CWC27Q6UX04 472 aaKnown RBP22.5■■□□□ 1.19
PMPCB-204ENST00000444457 RAPGEF4Q8WZA2 1011 aa22.5■■□□□ 1.19
PMPCB-204ENST00000444457 CTNNA3Q9UI47 895 aa22.5■■□□□ 1.19
PMPCB-204ENST00000444457 CNPY2Q9Y2B0 182 aa22.5■■□□□ 1.19
PMPCB-204ENST00000444457 KDM6AO15550 1401 aaPredicted RBP22.5■■□□□ 1.19
PMPCB-204ENST00000444457 GOLGA6L6A8MZA4 724 aa22.5■■□□□ 1.19
PMPCB-204ENST00000444457 SUCLG2Q96I99 432 aa22.5■■□□□ 1.19
PMPCB-204ENST00000444457 SNX14Q9Y5W7 946 aa22.5■■□□□ 1.19
PMPCB-204ENST00000444457 AIMP1Q12904 312 aaKnown RBP22.49■■□□□ 1.19
PMPCB-204ENST00000444457 ZNF790Q6PG37 636 aa22.49■■□□□ 1.19
PMPCB-204ENST00000444457 ECHDC1Q9NTX5 307 aa22.49■■□□□ 1.19
PMPCB-204ENST00000444457 NPHP3Q7Z494 1330 aa22.49■■□□□ 1.19
PMPCB-204ENST00000444457 GPATCH3Q96I76 525 aa22.49■■□□□ 1.19
PMPCB-204ENST00000444457 KAZALD1Q96I82 304 aa22.49■■□□□ 1.19
PMPCB-204ENST00000444457 SLC52A2Q9HAB3 445 aa22.49■■□□□ 1.19
PMPCB-204ENST00000444457 SLC39A6Q13433 755 aa22.48■■□□□ 1.19
PMPCB-204ENST00000444457 COL18A1P39060 1754 aa22.48■■□□□ 1.19
PMPCB-204ENST00000444457 IFIT2P09913 472 aaKnown RBP22.48■■□□□ 1.19
PMPCB-204ENST00000444457 NLRP2Q9NX02 1062 aa22.48■■□□□ 1.19
PMPCB-204ENST00000444457 BICC1Q9H694 974 aaKnown RBP22.47■■□□□ 1.19
PMPCB-204ENST00000444457 CGNQ9P2M7 1197 aaKnown RBP22.47■■□□□ 1.19
PMPCB-204ENST00000444457 PLCB2Q00722 1185 aa22.47■■□□□ 1.19
PMPCB-204ENST00000444457 SPG7Q9UQ90 795 aa22.47■■□□□ 1.19
PMPCB-204ENST00000444457 MEGF6O75095 1541 aa22.46■■□□□ 1.19
PMPCB-204ENST00000444457 PHKG2P15735 406 aa22.46■■□□□ 1.19
PMPCB-204ENST00000444457 RASEFQ8IZ41 740 aa22.46■■□□□ 1.19
PMPCB-204ENST00000444457 RUFY2Q8WXA3 655 aa22.46■■□□□ 1.19
PMPCB-204ENST00000444457 TTC14Q96N46 770 aa22.46■■□□□ 1.19
PMPCB-204ENST00000444457 DDX41Q9UJV9 622 aaKnown RBP22.46■■□□□ 1.19
PMPCB-204ENST00000444457 ABCC6O95255 1503 aa22.46■■□□□ 1.19
PMPCB-204ENST00000444457 ZSCAN22P10073 491 aaPredicted RBP22.46■■□□□ 1.19
PMPCB-204ENST00000444457 TATP17735 454 aaPredicted RBP22.46■■□□□ 1.19
PMPCB-204ENST00000444457 AACSQ86V21 672 aa22.46■■□□□ 1.19
PMPCB-204ENST00000444457 SMTNL1A8MU46 457 aa22.45■■□□□ 1.18
PMPCB-204ENST00000444457 IGKV5-2P06315 115 aa22.45■■□□□ 1.18
PMPCB-204ENST00000444457 RIC3Q7Z5B4 369 aa22.45■■□□□ 1.18
PMPCB-204ENST00000444457 SLFN14P0C7P3 912 aa22.45■■□□□ 1.18
PMPCB-204ENST00000444457 PDE4CQ08493 712 aa22.45■■□□□ 1.18
PMPCB-204ENST00000444457 GIMAP6Q6P9H5 292 aa22.45■■□□□ 1.18
PMPCB-204ENST00000444457 SPC24Q8NBT2 197 aa22.45■■□□□ 1.18
PMPCB-204ENST00000444457 SASH1O94885 1247 aa22.44■■□□□ 1.18
PMPCB-204ENST00000444457 LARP1Q6PKG0 1096 aaKnown RBP22.44■■□□□ 1.18
PMPCB-204ENST00000444457 NFATC2IPQ8NCF5 419 aa22.43■■□□□ 1.18
PMPCB-204ENST00000444457 MORC2Q9Y6X9 1032 aaPredicted RBP22.43■■□□□ 1.18
PMPCB-204ENST00000444457 G3BP1Q13283 466 aaKnown RBP eCLIP22.43■■□□□ 1.188e-6■□□□□ 9
PMPCB-204ENST00000444457 EVI5LQ96CN4 794 aa22.43■■□□□ 1.18
PMPCB-204ENST00000444457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.43■■□□□ 1.184e-7■■□□□ 12.3
PMPCB-204ENST00000444457 MYL6BP14649 208 aa22.42■■□□□ 1.18
PMPCB-204ENST00000444457 ATF3P18847 181 aa22.42■■□□□ 1.18
PMPCB-204ENST00000444457 AK2P54819 239 aa22.42■■□□□ 1.18
PMPCB-204ENST00000444457 DDX17Q92841 729 aaKnown RBP22.42■■□□□ 1.18
PMPCB-204ENST00000444457 MRC1P22897 1456 aa22.42■■□□□ 1.18
PMPCB-204ENST00000444457 NEXNQ0ZGT2 675 aa22.42■■□□□ 1.18
PMPCB-204ENST00000444457 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.42■■□□□ 1.18
PMPCB-204ENST00000444457 NEURL1BA8MQ27 555 aa22.41■■□□□ 1.18
PMPCB-204ENST00000444457 PTH1RQ03431 593 aa22.41■■□□□ 1.18
PMPCB-204ENST00000444457 IFNL2Q8IZJ0 200 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms