RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 NPHP3Q7Z494 1330 aa18.34■□□□□ 0.53
AP1S3-206ENST00000443700 KIF13AQ9H1H9 1805 aa18.33■□□□□ 0.53
AP1S3-206ENST00000443700 GOLGA6L4A6NEF3 574 aa18.33■□□□□ 0.53
AP1S3-206ENST00000443700 MAP4K1Q92918 833 aa18.33■□□□□ 0.53
AP1S3-206ENST00000443700 LTV1Q96GA3 475 aaPredicted RBP18.33■□□□□ 0.53
AP1S3-206ENST00000443700 BCL2L12Q9HB09 334 aa18.33■□□□□ 0.53
AP1S3-206ENST00000443700 HMG20BQ9P0W2 317 aa18.33■□□□□ 0.53
AP1S3-206ENST00000443700 ZBTB7CA1YPR0 619 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 AP5Z1O43299 807 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 TEFQ10587 303 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 BLOC1S2Q6QNY1 142 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 TNMDQ9H2S6 317 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 TPCN1Q9ULQ1 816 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 PYCARDQ9ULZ3 195 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 MRVI1Q9Y6F6 885 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 JCADQ9P266 1359 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 NFAT5O94916 1531 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 SLC27A2O14975 620 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 MRC1P22897 1456 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 AACSQ86V21 672 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 SPC24Q8NBT2 197 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 ARID3AQ99856 593 aa18.32■□□□□ 0.52
AP1S3-206ENST00000443700 CAVIN2O95810 425 aa18.31■□□□□ 0.52
AP1S3-206ENST00000443700 AKAP4Q5JQC9 854 aa18.31■□□□□ 0.52
AP1S3-206ENST00000443700 CDC37L1Q7L3B6 337 aa18.31■□□□□ 0.52
AP1S3-206ENST00000443700 ABTB2Q8N961 1025 aa18.31■□□□□ 0.52
AP1S3-206ENST00000443700 MED23Q9ULK4 1368 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 NMIQ13287 307 aaPredicted RBP18.3■□□□□ 0.52
AP1S3-206ENST00000443700 SYCP1Q15431 976 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 RBM43Q6ZSC3 357 aaKnown RBP18.3■□□□□ 0.52
AP1S3-206ENST00000443700 NECAB1Q8N987 351 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 IP6K1Q92551 441 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 SPATA32Q96LK8 384 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 CLSTN2Q9H4D0 955 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 MYH15Q9Y2K3 1946 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 NPHP4O75161 1426 aaPredicted RBP18.3■□□□□ 0.52
AP1S3-206ENST00000443700 BTBD11A6QL63 1104 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 RIOK3O14730 519 aaKnown RBP18.3■□□□□ 0.52
AP1S3-206ENST00000443700 RPS6KB1P23443 525 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 DMTNQ08495 405 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 KSR2Q6VAB6 950 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 PDCL2Q8N4E4 241 aa18.3■□□□□ 0.52
AP1S3-206ENST00000443700 SIPA1L3O60292 1781 aaPredicted RBP18.29■□□□□ 0.52
AP1S3-206ENST00000443700 CTIFO43310 598 aaKnown RBP18.29■□□□□ 0.52
AP1S3-206ENST00000443700 LIG1P18858 919 aa18.29■□□□□ 0.52
AP1S3-206ENST00000443700 G3BP1Q13283 466 aaKnown RBP eCLIP18.29■□□□□ 0.52
AP1S3-206ENST00000443700 KRT32Q14532 448 aa18.29■□□□□ 0.52
AP1S3-206ENST00000443700 USHBP1Q8N6Y0 703 aa18.29■□□□□ 0.52
AP1S3-206ENST00000443700 TDRD7Q8NHU6 1098 aaKnown RBP18.29■□□□□ 0.52
AP1S3-206ENST00000443700 MAP3K2Q9Y2U5 619 aa18.29■□□□□ 0.52
AP1S3-206ENST00000443700 RGPD2P0DJD1 1756 aa18.29■□□□□ 0.52
AP1S3-206ENST00000443700 LMTK3Q96Q04 1460 aa18.29■□□□□ 0.52
AP1S3-206ENST00000443700 RFX7Q2KHR2 1363 aa18.28■□□□□ 0.52
AP1S3-206ENST00000443700 UTYO14607 1347 aa18.28■□□□□ 0.52
AP1S3-206ENST00000443700 PPP4R3BQ5MIZ7 849 aa18.28■□□□□ 0.52
AP1S3-206ENST00000443700 ANKRD7Q92527 254 aa18.28■□□□□ 0.52
AP1S3-206ENST00000443700 GIGYF1O75420 1035 aaPredicted RBP18.27■□□□□ 0.52
AP1S3-206ENST00000443700 TSGA10IPQ3SY00 556 aa18.27■□□□□ 0.52
AP1S3-206ENST00000443700 ANO6Q4KMQ2 910 aa18.27■□□□□ 0.52
AP1S3-206ENST00000443700 NUTM2GQ5VZR2 741 aa18.27■□□□□ 0.52
AP1S3-206ENST00000443700 FSD1Q9BTV5 496 aa18.27■□□□□ 0.52
AP1S3-206ENST00000443700 GTPBP4Q9BZE4 634 aaKnown RBP18.27■□□□□ 0.52
AP1S3-206ENST00000443700 CBX8Q9HC52 389 aa18.27■□□□□ 0.52
AP1S3-206ENST00000443700 DACT1Q9NYF0 836 aa18.27■□□□□ 0.52
AP1S3-206ENST00000443700 DDX58O95786 925 aaKnown RBP18.27■□□□□ 0.51
AP1S3-206ENST00000443700 PTGS1P23219 599 aa18.27■□□□□ 0.51
AP1S3-206ENST00000443700 CDC25BP30305 580 aa18.27■□□□□ 0.51
AP1S3-206ENST00000443700 AMOTQ4VCS5 1084 aa18.27■□□□□ 0.51
AP1S3-206ENST00000443700 PLEKHO1Q53GL0 409 aaPredicted RBP18.27■□□□□ 0.51
AP1S3-206ENST00000443700 PLA2G4DQ86XP0 818 aa18.27■□□□□ 0.51
AP1S3-206ENST00000443700 DRC7Q8IY82 874 aa18.27■□□□□ 0.51
AP1S3-206ENST00000443700 LEO1Q8WVC0 666 aaPredicted RBP18.27■□□□□ 0.51
AP1S3-206ENST00000443700 FAM227BQ96M60 508 aa18.27■□□□□ 0.51
AP1S3-206ENST00000443700 SMTNL1A8MU46 457 aa18.26■□□□□ 0.51
AP1S3-206ENST00000443700 ZNF75DP51815 510 aa18.26■□□□□ 0.51
AP1S3-206ENST00000443700 ZNF530Q6P9A1 599 aaPredicted RBP18.26■□□□□ 0.51
AP1S3-206ENST00000443700 FERMT3Q86UX7 667 aa18.26■□□□□ 0.51
AP1S3-206ENST00000443700 LUZP1Q86V48 1076 aa18.26■□□□□ 0.51
AP1S3-206ENST00000443700 LINS1Q8NG48 757 aa18.26■□□□□ 0.51
AP1S3-206ENST00000443700 TSC1Q92574 1164 aa18.26■□□□□ 0.51
AP1S3-206ENST00000443700 LGR6Q9HBX8 967 aa18.26■□□□□ 0.51
AP1S3-206ENST00000443700 PA2G4Q9UQ80 394 aaKnown RBP18.26■□□□□ 0.51
AP1S3-206ENST00000443700 GRM8O00222 908 aa18.25■□□□□ 0.51
AP1S3-206ENST00000443700 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
AP1S3-206ENST00000443700 CAMK4Q16566 473 aa18.25■□□□□ 0.51
AP1S3-206ENST00000443700 BICD2Q8TD16 824 aa18.25■□□□□ 0.51
AP1S3-206ENST00000443700 TRIM5Q9C035 493 aa18.25■□□□□ 0.51
AP1S3-206ENST00000443700 ZSCAN16Q9H4T2 348 aaPredicted RBP18.25■□□□□ 0.51
AP1S3-206ENST00000443700 HEG1Q9ULI3 1381 aa18.24■□□□□ 0.51
AP1S3-206ENST00000443700 ADAMTS7Q9UKP4 1686 aa18.24■□□□□ 0.51
AP1S3-206ENST00000443700 A0A0D9SFI3 127 aa18.24■□□□□ 0.51
AP1S3-206ENST00000443700 ANXA1P04083 346 aa18.24■□□□□ 0.51
AP1S3-206ENST00000443700 TOB2Q14106 344 aaPredicted RBP18.24■□□□□ 0.51
AP1S3-206ENST00000443700 LARP1Q6PKG0 1096 aaKnown RBP18.24■□□□□ 0.51
AP1S3-206ENST00000443700 CCDC186Q7Z3E2 898 aa18.24■□□□□ 0.51
AP1S3-206ENST00000443700 JARID2Q92833 1246 aaPredicted RBP18.24■□□□□ 0.51
AP1S3-206ENST00000443700 CHMP3Q9Y3E7 222 aa18.24■□□□□ 0.51
AP1S3-206ENST00000443700 KCNQ3O43525 872 aa18.23■□□□□ 0.51
AP1S3-206ENST00000443700 SASH1O94885 1247 aa18.23■□□□□ 0.51
AP1S3-206ENST00000443700 C1orf141Q5JVX7 400 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms