RNA–Protein interactions for RNA: ENST00000443612.1

PFN1P3-201, Transcript of profilin 1 pseudogene 3, humanhuman

BASIC

Gene PFN1P3, Length 402 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1P3-201ENST00000443612 ZNF853P0CG23 659 aa15.74■□□□□ 0.11
PFN1P3-201ENST00000443612 CRY2Q49AN0 593 aa15.74■□□□□ 0.11
PFN1P3-201ENST00000443612 DPY19L2Q6NUT2 758 aa15.74■□□□□ 0.11
PFN1P3-201ENST00000443612 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
PFN1P3-201ENST00000443612 CHPF2Q9P2E5 772 aa15.74■□□□□ 0.11
PFN1P3-201ENST00000443612 DBF4Q9UBU7 674 aaPredicted RBP15.74■□□□□ 0.11
PFN1P3-201ENST00000443612 CCDC184Q52MB2 194 aa15.73■□□□□ 0.11
PFN1P3-201ENST00000443612 DUSP27Q5VZP5 1158 aa15.73■□□□□ 0.11
PFN1P3-201ENST00000443612 RBM46Q8TBY0 533 aaKnown RBP15.73■□□□□ 0.11
PFN1P3-201ENST00000443612 UTP14AQ9BVJ6 771 aaKnown RBP15.73■□□□□ 0.11
PFN1P3-201ENST00000443612 CEP350Q5VT06 3117 aa15.72■□□□□ 0.11
PFN1P3-201ENST00000443612 RTKN2Q8IZC4 609 aa15.72■□□□□ 0.11
PFN1P3-201ENST00000443612 NLRP3Q96P20 1036 aa15.72■□□□□ 0.11
PFN1P3-201ENST00000443612 HYPKQ9NX55 129 aa15.72■□□□□ 0.11
PFN1P3-201ENST00000443612 RNF123Q5XPI4 1314 aa15.71■□□□□ 0.11
PFN1P3-201ENST00000443612 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
PFN1P3-201ENST00000443612 HOXA10P31260 410 aaPredicted RBP15.71■□□□□ 0.11
PFN1P3-201ENST00000443612 FKBP4Q02790 459 aaKnown RBP eCLIP15.71■□□□□ 0.11
PFN1P3-201ENST00000443612 TCIRG1Q13488 830 aa15.71■□□□□ 0.11
PFN1P3-201ENST00000443612 RBM17Q96I25 401 aaKnown RBP15.71■□□□□ 0.11
PFN1P3-201ENST00000443612 MRS2Q9HD23 443 aa15.71■□□□□ 0.11
PFN1P3-201ENST00000443612 CC2D2BQ6DHV5 1058 aa15.7■□□□□ 0.1
PFN1P3-201ENST00000443612 ANKRD13DQ6ZTN6 518 aa15.7■□□□□ 0.1
PFN1P3-201ENST00000443612 NLRP10Q86W26 655 aa15.7■□□□□ 0.1
PFN1P3-201ENST00000443612 PLBD2Q8NHP8 589 aa15.7■□□□□ 0.1
PFN1P3-201ENST00000443612 CHMP4AQ9BY43 222 aa15.7■□□□□ 0.1
PFN1P3-201ENST00000443612 WDR90Q96KV7 1748 aa15.7■□□□□ 0.1
PFN1P3-201ENST00000443612 LAMB2P55268 1798 aa15.7■□□□□ 0.1
PFN1P3-201ENST00000443612 FSTL1Q12841 308 aa15.69■□□□□ 0.1
PFN1P3-201ENST00000443612 SLC10A5Q5PT55 438 aa15.69■□□□□ 0.1
PFN1P3-201ENST00000443612 OLFM4Q6UX06 510 aa15.69■□□□□ 0.1
PFN1P3-201ENST00000443612 CRAMP1Q96RY5 1269 aa15.69■□□□□ 0.1
PFN1P3-201ENST00000443612 ELL2O00472 640 aaPredicted RBP15.68■□□□□ 0.1
PFN1P3-201ENST00000443612 APLP1P51693 650 aa15.68■□□□□ 0.1
PFN1P3-201ENST00000443612 CCDC27Q2M243 656 aa15.68■□□□□ 0.1
PFN1P3-201ENST00000443612 GRIPAP1Q4V328 841 aa15.68■□□□□ 0.1
PFN1P3-201ENST00000443612 ZNF277Q9NRM2 450 aaPredicted RBP15.68■□□□□ 0.1
PFN1P3-201ENST00000443612 TRMT112Q9UI30 125 aaKnown RBP15.68■□□□□ 0.1
PFN1P3-201ENST00000443612 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
PFN1P3-201ENST00000443612 SYNE4Q8N205 404 aa15.67■□□□□ 0.1
PFN1P3-201ENST00000443612 SMC1BQ8NDV3 1235 aa15.67■□□□□ 0.1
PFN1P3-201ENST00000443612 PSMD1Q99460 953 aa15.67■□□□□ 0.1
PFN1P3-201ENST00000443612 TMX4Q9H1E5 349 aaPredicted RBP15.67■□□□□ 0.1
PFN1P3-201ENST00000443612 PPEF1O14829 653 aaPredicted RBP15.66■□□□□ 0.1
PFN1P3-201ENST00000443612 GOLGA2Q08379 1002 aa15.66■□□□□ 0.1
PFN1P3-201ENST00000443612 C3orf67Q6ZVT6 689 aa15.66■□□□□ 0.1
PFN1P3-201ENST00000443612 TCERG1O14776 1098 aaKnown RBP15.65■□□□□ 0.1
PFN1P3-201ENST00000443612 DDNO94850 711 aaPredicted RBP15.65■□□□□ 0.1
PFN1P3-201ENST00000443612 HCLS1P14317 486 aaPredicted RBP15.65■□□□□ 0.1
PFN1P3-201ENST00000443612 IARSP41252 1262 aaKnown RBP15.65■□□□□ 0.1
PFN1P3-201ENST00000443612 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
PFN1P3-201ENST00000443612 CCDC30Q5VVM6 783 aa15.65■□□□□ 0.1
PFN1P3-201ENST00000443612 RIC3Q7Z5B4 369 aa15.65■□□□□ 0.1
PFN1P3-201ENST00000443612 WWC1Q8IX03 1113 aa15.65■□□□□ 0.1
PFN1P3-201ENST00000443612 C8orf58Q8NAV2 365 aa15.65■□□□□ 0.1
PFN1P3-201ENST00000443612 SCN4AP35499 1836 aa15.65■□□□□ 0.1
PFN1P3-201ENST00000443612 TAF1P21675 1872 aa15.65■□□□□ 0.1
PFN1P3-201ENST00000443612 CACNA1FO60840 1977 aa15.64■□□□□ 0.09
PFN1P3-201ENST00000443612 POTECB2RU33 542 aa15.64■□□□□ 0.09
PFN1P3-201ENST00000443612 DDX60Q8IY21 1712 aaKnown RBP15.64■□□□□ 0.09
PFN1P3-201ENST00000443612 ISCA1Q9BUE6 129 aa15.64■□□□□ 0.09
PFN1P3-201ENST00000443612 ABCC4O15439 1325 aa15.64■□□□□ 0.09
PFN1P3-201ENST00000443612 SNED1Q8TER0 1413 aa15.63■□□□□ 0.09
PFN1P3-201ENST00000443612 ATP5J2-PTCD1G3V325 749 aa15.63■□□□□ 0.09
PFN1P3-201ENST00000443612 DDX46Q7L014 1031 aaKnown RBP15.63■□□□□ 0.09
PFN1P3-201ENST00000443612 JDP2Q8WYK2 163 aa15.63■□□□□ 0.09
PFN1P3-201ENST00000443612 TSR2Q969E8 191 aaKnown RBP15.63■□□□□ 0.09
PFN1P3-201ENST00000443612 PHAXQ9H814 394 aaKnown RBP15.63■□□□□ 0.09
PFN1P3-201ENST00000443612 IL16Q14005 1332 aa15.63■□□□□ 0.09
PFN1P3-201ENST00000443612 IQCA1LA6NCM1 817 aa15.62■□□□□ 0.09
PFN1P3-201ENST00000443612 BBOX1O75936 387 aa15.62■□□□□ 0.09
PFN1P3-201ENST00000443612 DDX58O95786 925 aaKnown RBP15.62■□□□□ 0.09
PFN1P3-201ENST00000443612 TRIM28Q13263 835 aaKnown RBP15.62■□□□□ 0.09
PFN1P3-201ENST00000443612 ZNF428Q96B54 188 aa15.62■□□□□ 0.09
PFN1P3-201ENST00000443612 FAM89AQ96GI7 184 aa15.62■□□□□ 0.09
PFN1P3-201ENST00000443612 ATP6V0A2Q9Y487 856 aa15.62■□□□□ 0.09
PFN1P3-201ENST00000443612 FZD9O00144 591 aa15.61■□□□□ 0.09
PFN1P3-201ENST00000443612 TSPYL6Q8N831 410 aa15.61■□□□□ 0.09
PFN1P3-201ENST00000443612 L3MBTL3Q96JM7 780 aaPredicted RBP15.61■□□□□ 0.09
PFN1P3-201ENST00000443612 STK31Q9BXU1 1019 aa15.61■□□□□ 0.09
PFN1P3-201ENST00000443612 GRAPQ13588 217 aa15.6■□□□□ 0.09
PFN1P3-201ENST00000443612 SP8Q8IXZ3 490 aa15.6■□□□□ 0.09
PFN1P3-201ENST00000443612 LARGE2Q8N3Y3 721 aa15.6■□□□□ 0.09
PFN1P3-201ENST00000443612 GRAPLQ8TC17 118 aaPredicted RBP15.6■□□□□ 0.09
PFN1P3-201ENST00000443612 ZNF541Q9H0D2 1346 aa15.6■□□□□ 0.09
PFN1P3-201ENST00000443612 HSP90B1P14625 803 aaKnown RBP15.59■□□□□ 0.09
PFN1P3-201ENST00000443612 EIF6P56537 245 aaKnown RBP15.59■□□□□ 0.09
PFN1P3-201ENST00000443612 TWISTNBQ3B726 338 aaPredicted RBP15.59■□□□□ 0.09
PFN1P3-201ENST00000443612 RTL5Q5HYW3 569 aaPredicted RBP15.59■□□□□ 0.09
PFN1P3-201ENST00000443612 TMC4Q7Z404 712 aa15.59■□□□□ 0.09
PFN1P3-201ENST00000443612 SUPT20HQ8NEM7 779 aa15.59■□□□□ 0.09
PFN1P3-201ENST00000443612 MYD88Q99836 296 aa15.59■□□□□ 0.09
PFN1P3-201ENST00000443612 VPS33BQ9H267 617 aa15.59■□□□□ 0.09
PFN1P3-201ENST00000443612 SALL2Q9Y467 1007 aaPredicted RBP15.59■□□□□ 0.09
PFN1P3-201ENST00000443612 IRS4O14654 1257 aaPredicted RBP15.58■□□□□ 0.08
PFN1P3-201ENST00000443612 SF3B3Q15393 1217 aaKnown RBP15.58■□□□□ 0.08
PFN1P3-201ENST00000443612 DPP8Q6V1X1 898 aaPredicted RBP15.58■□□□□ 0.08
PFN1P3-201ENST00000443612 SLC51AQ86UW1 340 aa15.58■□□□□ 0.08
PFN1P3-201ENST00000443612 WDR63Q8IWG1 891 aa15.58■□□□□ 0.08
PFN1P3-201ENST00000443612 NIM1KQ8IY84 436 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms