RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 COL4A5P29400 1685 aa13.43□□□□□ -0.26
SYN3-204ENST00000441821 NBPF26B4DH59 902 aa13.42□□□□□ -0.26
SYN3-204ENST00000441821 CA12O43570 354 aa13.42□□□□□ -0.26
SYN3-204ENST00000441821 GRM1Q13255 1194 aa13.42□□□□□ -0.26
SYN3-204ENST00000441821 CC2D1BQ5T0F9 858 aaKnown RBP13.42□□□□□ -0.26
SYN3-204ENST00000441821 NBPF10Q6P3W6 841 aaKnown RBP13.42□□□□□ -0.26
SYN3-204ENST00000441821 NBPF15Q8N660 670 aa13.42□□□□□ -0.26
SYN3-204ENST00000441821 TRPM7Q96QT4 1865 aa13.42□□□□□ -0.26
SYN3-204ENST00000441821 TRAF5O00463 557 aa13.41□□□□□ -0.26
SYN3-204ENST00000441821 AOC2O75106 756 aa13.41□□□□□ -0.26
SYN3-204ENST00000441821 HOXA10P31260 410 aaPredicted RBP13.41□□□□□ -0.26
SYN3-204ENST00000441821 HLFQ16534 295 aa13.41□□□□□ -0.26
SYN3-204ENST00000441821 PHACTR3Q96KR7 559 aa13.41□□□□□ -0.26
SYN3-204ENST00000441821 NYXQ9GZU5 481 aa13.41□□□□□ -0.26
SYN3-204ENST00000441821 TSKSQ9UJT2 592 aa13.41□□□□□ -0.26
SYN3-204ENST00000441821 LARGE2Q8N3Y3 721 aa13.4□□□□□ -0.26
SYN3-204ENST00000441821 HHIPL1Q96JK4 782 aa13.4□□□□□ -0.26
SYN3-204ENST00000441821 MCOLN1Q9GZU1 580 aa13.4□□□□□ -0.26
SYN3-204ENST00000441821 KIF7Q2M1P5 1343 aa13.39□□□□□ -0.27
SYN3-204ENST00000441821 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
SYN3-204ENST00000441821 SAPCD2Q86UD0 394 aa13.39□□□□□ -0.27
SYN3-204ENST00000441821 RPGRQ92834 1020 aaKnown RBP13.39□□□□□ -0.27
SYN3-204ENST00000441821 ADARB2Q9NS39 739 aaKnown RBP13.39□□□□□ -0.27
SYN3-204ENST00000441821 ABCC12Q96J65 1359 aa13.39□□□□□ -0.27
SYN3-204ENST00000441821 ERVV-1B6SEH8 477 aa13.38□□□□□ -0.27
SYN3-204ENST00000441821 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
SYN3-204ENST00000441821 NUTM1Q86Y26 1132 aa13.38□□□□□ -0.27
SYN3-204ENST00000441821 NIM1KQ8IY84 436 aa13.38□□□□□ -0.27
SYN3-204ENST00000441821 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
SYN3-204ENST00000441821 CFAP44Q96MT7 982 aa13.38□□□□□ -0.27
SYN3-204ENST00000441821 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
SYN3-204ENST00000441821 VPS33BQ9H267 617 aa13.38□□□□□ -0.27
SYN3-204ENST00000441821 GPRC5DQ9NZD1 345 aa13.38□□□□□ -0.27
SYN3-204ENST00000441821 RIC1Q4ADV7 1423 aa13.38□□□□□ -0.27
SYN3-204ENST00000441821 NPC1L1Q9UHC9 1359 aa13.37□□□□□ -0.27
SYN3-204ENST00000441821 CELF2O95319 508 aaKnown RBP13.37□□□□□ -0.27
SYN3-204ENST00000441821 MCM10Q7L590 875 aa13.37□□□□□ -0.27
SYN3-204ENST00000441821 RBM17Q96I25 401 aaKnown RBP13.37□□□□□ -0.27
SYN3-204ENST00000441821 CRAMP1Q96RY5 1269 aa13.37□□□□□ -0.27
SYN3-204ENST00000441821 PCGF6Q9BYE7 350 aa13.37□□□□□ -0.27
SYN3-204ENST00000441821 PGAP2Q9UHJ9 254 aa13.37□□□□□ -0.27
SYN3-204ENST00000441821 IBTKQ9P2D0 1353 aaPredicted RBP13.36□□□□□ -0.27
SYN3-204ENST00000441821 PPEF1O14829 653 aaPredicted RBP13.36□□□□□ -0.27
SYN3-204ENST00000441821 DGKZQ13574 1117 aa13.36□□□□□ -0.27
SYN3-204ENST00000441821 PPIP5K2O43314 1243 aa13.35□□□□□ -0.27
SYN3-204ENST00000441821 HTATSF1O43719 755 aaKnown RBP13.35□□□□□ -0.27
SYN3-204ENST00000441821 CXCL9Q07325 125 aa13.35□□□□□ -0.27
SYN3-204ENST00000441821 ZC3H15Q8WU90 426 aaKnown RBP13.35□□□□□ -0.27
SYN3-204ENST00000441821 MAP3K15Q6ZN16 1313 aa13.35□□□□□ -0.27
SYN3-204ENST00000441821 TAF7Q15545 349 aaPredicted RBP13.34□□□□□ -0.27
SYN3-204ENST00000441821 GLIS2Q9BZE0 524 aaPredicted RBP13.34□□□□□ -0.27
SYN3-204ENST00000441821 TMX4Q9H1E5 349 aaPredicted RBP13.34□□□□□ -0.27
SYN3-204ENST00000441821 ZNRF3Q9ULT6 936 aa13.34□□□□□ -0.27
SYN3-204ENST00000441821 NUP98P52948 1817 aa13.34□□□□□ -0.27
SYN3-204ENST00000441821 CASP8AP2Q9UKL3 1982 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 TCERG1O14776 1098 aaKnown RBP13.33□□□□□ -0.28
SYN3-204ENST00000441821 GMPSP49915 693 aaPredicted RBP13.33□□□□□ -0.28
SYN3-204ENST00000441821 DCTN1Q14203 1278 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 AOC3Q16853 763 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 SUSD4Q5VX71 490 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 CIAPIN1Q6FI81 312 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 KIF6Q6ZMV9 814 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 SLC51AQ86UW1 340 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 NGEFQ8N5V2 710 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 SUPT20HQ8NEM7 779 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 CFAP53Q96M91 514 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 NUDCQ9Y266 331 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 ATP6V0A2Q9Y487 856 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 UBN2Q6ZU65 1347 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 CDHR2Q9BYE9 1310 aa13.33□□□□□ -0.28
SYN3-204ENST00000441821 LAMB4A4D0S4 1761 aa13.32□□□□□ -0.28
SYN3-204ENST00000441821 GPTP24298 496 aa13.32□□□□□ -0.28
SYN3-204ENST00000441821 NOGQ13253 232 aa13.32□□□□□ -0.28
SYN3-204ENST00000441821 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
SYN3-204ENST00000441821 ZNF34Q8IZ26 560 aa13.32□□□□□ -0.28
SYN3-204ENST00000441821 RTFDC1Q9BY42 306 aaPredicted RBP13.32□□□□□ -0.28
SYN3-204ENST00000441821 NTSR2O95665 410 aa13.31□□□□□ -0.28
SYN3-204ENST00000441821 HIRAP54198 1017 aaPredicted RBP13.31□□□□□ -0.28
SYN3-204ENST00000441821 TTLL7Q6ZT98 887 aa13.31□□□□□ -0.28
SYN3-204ENST00000441821 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
SYN3-204ENST00000441821 NLRP3Q96P20 1036 aa13.31□□□□□ -0.28
SYN3-204ENST00000441821 ZNF408Q9H9D4 720 aa13.31□□□□□ -0.28
SYN3-204ENST00000441821 MIS18AQ9NYP9 233 aa13.31□□□□□ -0.28
SYN3-204ENST00000441821 U2AF1L5P0DN76 240 aaPredicted RBP13.3□□□□□ -0.28
SYN3-204ENST00000441821 U2AF1Q01081 240 aaKnown RBP eCLIP13.3□□□□□ -0.28
SYN3-204ENST00000441821 CNGB1Q14028 1251 aaPredicted RBP13.3□□□□□ -0.28
SYN3-204ENST00000441821 TNIP1Q15025 636 aa13.3□□□□□ -0.28
SYN3-204ENST00000441821 PPP1R42Q7Z4L9 355 aa13.3□□□□□ -0.28
SYN3-204ENST00000441821 ZBTB3Q9H5J0 574 aa13.3□□□□□ -0.28
SYN3-204ENST00000441821 RRP7AQ9Y3A4 280 aaKnown RBP13.3□□□□□ -0.28
SYN3-204ENST00000441821 BBOX1O75936 387 aa13.29□□□□□ -0.28
SYN3-204ENST00000441821 HUNKP57058 714 aa13.29□□□□□ -0.28
SYN3-204ENST00000441821 KIAA2012Q0VF49 1180 aa13.29□□□□□ -0.28
SYN3-204ENST00000441821 SLC10A5Q5PT55 438 aa13.29□□□□□ -0.28
SYN3-204ENST00000441821 GIGYF2Q6Y7W6 1299 aaKnown RBP13.29□□□□□ -0.28
SYN3-204ENST00000441821 PNISRQ8TF01 805 aaKnown RBP13.29□□□□□ -0.28
SYN3-204ENST00000441821 ZIC5Q96T25 663 aa13.29□□□□□ -0.28
SYN3-204ENST00000441821 BCL2L13Q9BXK5 485 aa13.29□□□□□ -0.28
SYN3-204ENST00000441821 SAGE1Q9NXZ1 904 aa13.29□□□□□ -0.28
SYN3-204ENST00000441821 RAD17O75943 681 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms