RNA–Protein interactions for RNA: ENST00000441787.5

PRDM15-205, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-205ENST00000441787 TERF1P54274 439 aa11.77□□□□□ -0.53
PRDM15-205ENST00000441787 HSP90AA4PQ58FG1 418 aa11.77□□□□□ -0.53
PRDM15-205ENST00000441787 SLC4A4Q9Y6R1 1079 aa11.77□□□□□ -0.53
PRDM15-205ENST00000441787 NKTRP30414 1462 aaKnown RBP11.77□□□□□ -0.53
PRDM15-205ENST00000441787 KIF4BQ2VIQ3 1234 aa11.77□□□□□ -0.53
PRDM15-205ENST00000441787 LIMCH1Q9UPQ0 1083 aa11.77□□□□□ -0.53
PRDM15-205ENST00000441787 URI1O94763 535 aaPredicted RBP11.76□□□□□ -0.53
PRDM15-205ENST00000441787 CCDC183Q5T5S1 534 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 HEATR3Q7Z4Q2 680 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 KIF5CO60282 957 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 SNRPA1P09661 255 aaKnown RBP11.76□□□□□ -0.53
PRDM15-205ENST00000441787 ZNF354CQ86Y25 554 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 LRRC59Q96AG4 307 aaKnown RBP11.76□□□□□ -0.53
PRDM15-205ENST00000441787 GOLGA6L7A0A1B0GV03 622 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 MAP2K1Q02750 393 aaPredicted RBP11.76□□□□□ -0.53
PRDM15-205ENST00000441787 VPS36Q86VN1 386 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 TCEANC2Q96MN5 208 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 IFFO1Q0D2I5 559 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 NECAB1Q8N987 351 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 ZCRB1Q8TBF4 217 aaKnown RBP11.76□□□□□ -0.53
PRDM15-205ENST00000441787 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 CRNKL1Q9BZJ0 848 aaKnown RBP11.76□□□□□ -0.53
PRDM15-205ENST00000441787 PCF11O94913 1555 aaKnown RBP11.76□□□□□ -0.53
PRDM15-205ENST00000441787 SBNO2Q9Y2G9 1366 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 CCDC66A2RUB6 948 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 RGS22Q8NE09 1264 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 ECHDC1Q9NTX5 307 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 TCP11L1Q9NUJ3 509 aa11.76□□□□□ -0.53
PRDM15-205ENST00000441787 KIF5BP33176 963 aa11.75□□□□□ -0.53
PRDM15-205ENST00000441787 DPH6Q7L8W6 267 aa11.75□□□□□ -0.53
PRDM15-205ENST00000441787 TMC6Q7Z403 805 aa11.75□□□□□ -0.53
PRDM15-205ENST00000441787 RBM27Q9P2N5 1060 aaKnown RBP11.75□□□□□ -0.53
PRDM15-205ENST00000441787 NIP7Q9Y221 180 aaKnown RBP eCLIP11.75□□□□□ -0.53
PRDM15-205ENST00000441787 GOLGA6L10A0A0M3HER8 536 aa11.75□□□□□ -0.53
PRDM15-205ENST00000441787 SH2B1Q9NRF2 756 aaPredicted RBP11.75□□□□□ -0.53
PRDM15-205ENST00000441787 LDHCP07864 332 aa11.75□□□□□ -0.53
PRDM15-205ENST00000441787 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
PRDM15-205ENST00000441787 ANKRD13DQ6ZTN6 518 aa11.75□□□□□ -0.53
PRDM15-205ENST00000441787 UBXN4Q92575 508 aa11.75□□□□□ -0.53
PRDM15-205ENST00000441787 KIF20AO95235 890 aa11.75□□□□□ -0.53
PRDM15-205ENST00000441787 AFMP43652 599 aa11.75□□□□□ -0.53
PRDM15-205ENST00000441787 NCOA7Q8NI08 942 aa11.75□□□□□ -0.53
PRDM15-205ENST00000441787 ORC3Q9UBD5 711 aaPredicted RBP11.75□□□□□ -0.53
PRDM15-205ENST00000441787 PTPN14Q15678 1187 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 AKNAD1Q5T1N1 836 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 CCDC91Q7Z6B0 441 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 NEK1Q96PY6 1258 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 TEX13AQ9BXU3 409 aaPredicted RBP11.74□□□□□ -0.53
PRDM15-205ENST00000441787 PTPRCP08575 1304 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 HMGB2P26583 209 aaKnown RBP11.74□□□□□ -0.53
PRDM15-205ENST00000441787 NOP2P46087 812 aaKnown RBP11.74□□□□□ -0.53
PRDM15-205ENST00000441787 TBC1D9Q6ZT07 1266 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 PTPN23Q9H3S7 1636 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 HELBQ8NG08 1087 aaPredicted RBP11.74□□□□□ -0.53
PRDM15-205ENST00000441787 CRACR2AQ9BSW2 395 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 SCAND2PQ9GZW5 306 aaPredicted RBP11.74□□□□□ -0.53
PRDM15-205ENST00000441787 USP25Q9UHP3 1055 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 IQGAP2Q13576 1575 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 YEATS4O95619 227 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 FGFR1OPO95684 399 aaKnown RBP11.74□□□□□ -0.53
PRDM15-205ENST00000441787 COPS6Q7L5N1 327 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 MTERF4Q7Z6M4 381 aaKnown RBP11.74□□□□□ -0.53
PRDM15-205ENST00000441787 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 ZBTB21Q9ULJ3 1066 aa11.74□□□□□ -0.53
PRDM15-205ENST00000441787 MSH6P52701 1360 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 GSTO1P78417 241 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 IFIT1BQ5T764 474 aaKnown RBP11.73□□□□□ -0.53
PRDM15-205ENST00000441787 CCDC12Q8WUD4 166 aaPredicted RBP11.73□□□□□ -0.53
PRDM15-205ENST00000441787 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 CALM1P0DP23 149 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 CALM2P0DP24 149 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 CALM3P0DP25 149 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 DISP3Q9P2K9 1392 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 KLF18A0A0U1RQI7 1052 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 WTAPQ15007 396 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 FAM212AQ96EL1 285 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 PIK3R4Q99570 1358 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 ZSCAN12O43309 604 aa11.73□□□□□ -0.53
PRDM15-205ENST00000441787 TBCAO75347 108 aaKnown RBP11.72□□□□□ -0.53
PRDM15-205ENST00000441787 MIGA1Q8NAN2 632 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 SIRT1Q96EB6 747 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 TMCO3Q6UWJ1 677 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 HOOK3Q86VS8 718 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
PRDM15-205ENST00000441787 PA2G4Q9UQ80 394 aaKnown RBP11.72□□□□□ -0.53
PRDM15-205ENST00000441787 TTC21BQ7Z4L5 1316 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 UBA7P41226 1012 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 SP4Q02446 784 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 CHST3Q7LGC8 479 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 HDAC9Q9UKV0 1011 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 C16orf71Q8IYS4 520 aaPredicted RBP11.72□□□□□ -0.53
PRDM15-205ENST00000441787 TNPO1Q92973 898 aaKnown RBP11.72□□□□□ -0.53
PRDM15-205ENST00000441787 PODXL2Q9NZ53 605 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 DNMBPQ6XZF7 1577 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 LMAN1P49257 510 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 AMPD3Q01432 767 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 ZBTB9Q96C00 473 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 SYNCQ9H7C4 482 aa11.72□□□□□ -0.53
PRDM15-205ENST00000441787 DNAJC5BQ9UF47 199 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms