RNA–Protein interactions for RNA: ENST00000441238.1

TGFA-IT1-201, TGFA intronic transcript 1, humanhuman

TSL 5 BASIC

Gene TGFA-IT1, Length 436 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-IT1-201ENST00000441238 GTF2E1P29083 439 aaPredicted RBP13.24□□□□□ -0.29
TGFA-IT1-201ENST00000441238 ALDH1B1P30837 517 aa13.24□□□□□ -0.29
TGFA-IT1-201ENST00000441238 TCIRG1Q13488 830 aa13.24□□□□□ -0.29
TGFA-IT1-201ENST00000441238 ERFEQ4G0M1 354 aa13.24□□□□□ -0.29
TGFA-IT1-201ENST00000441238 PPP1R42Q7Z4L9 355 aa13.24□□□□□ -0.29
TGFA-IT1-201ENST00000441238 NUTM1Q86Y26 1132 aa13.24□□□□□ -0.29
TGFA-IT1-201ENST00000441238 PLBD2Q8NHP8 589 aa13.24□□□□□ -0.29
TGFA-IT1-201ENST00000441238 SNED1Q8TER0 1413 aa13.23□□□□□ -0.29
TGFA-IT1-201ENST00000441238 AIMP1Q12904 312 aaKnown RBP13.23□□□□□ -0.29
TGFA-IT1-201ENST00000441238 NLRP10Q86W26 655 aa13.23□□□□□ -0.29
TGFA-IT1-201ENST00000441238 C8orf58Q8NAV2 365 aa13.23□□□□□ -0.29
TGFA-IT1-201ENST00000441238 ZNF526Q8TF50 670 aaPredicted RBP13.23□□□□□ -0.29
TGFA-IT1-201ENST00000441238 CHMP4AQ9BY43 222 aa13.23□□□□□ -0.29
TGFA-IT1-201ENST00000441238 TRIM28Q13263 835 aaKnown RBP13.22□□□□□ -0.29
TGFA-IT1-201ENST00000441238 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
TGFA-IT1-201ENST00000441238 CRAMP1Q96RY5 1269 aa13.22□□□□□ -0.29
TGFA-IT1-201ENST00000441238 UTP14AQ9BVJ6 771 aaKnown RBP13.22□□□□□ -0.29
TGFA-IT1-201ENST00000441238 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
TGFA-IT1-201ENST00000441238 KDM2BQ8NHM5 1336 aa13.21□□□□□ -0.29
TGFA-IT1-201ENST00000441238 ISCA1Q9BUE6 129 aa13.21□□□□□ -0.29
TGFA-IT1-201ENST00000441238 TAOK3Q9H2K8 898 aa13.21□□□□□ -0.29
TGFA-IT1-201ENST00000441238 NMRK2Q9NPI5 230 aa13.21□□□□□ -0.29
TGFA-IT1-201ENST00000441238 WDR90Q96KV7 1748 aa13.2□□□□□ -0.3
TGFA-IT1-201ENST00000441238 GLTPD2A6NH11 291 aa13.2□□□□□ -0.3
TGFA-IT1-201ENST00000441238 CCDC93Q567U6 631 aa13.2□□□□□ -0.3
TGFA-IT1-201ENST00000441238 WDR63Q8IWG1 891 aa13.2□□□□□ -0.3
TGFA-IT1-201ENST00000441238 TAF1P21675 1872 aa13.2□□□□□ -0.3
TGFA-IT1-201ENST00000441238 ELL2O00472 640 aaPredicted RBP13.19□□□□□ -0.3
TGFA-IT1-201ENST00000441238 TOMM70O94826 608 aa13.19□□□□□ -0.3
TGFA-IT1-201ENST00000441238 CCDC30Q5VVM6 783 aa13.19□□□□□ -0.3
TGFA-IT1-201ENST00000441238 CC2D2BQ6DHV5 1058 aa13.19□□□□□ -0.3
TGFA-IT1-201ENST00000441238 RTKN2Q8IZC4 609 aa13.19□□□□□ -0.3
TGFA-IT1-201ENST00000441238 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
TGFA-IT1-201ENST00000441238 NLRP3Q96P20 1036 aa13.19□□□□□ -0.3
TGFA-IT1-201ENST00000441238 ZNF219Q9P2Y4 722 aaPredicted RBP13.19□□□□□ -0.3
TGFA-IT1-201ENST00000441238 FKBP4Q02790 459 aaKnown RBP eCLIP13.18□□□□□ -0.3
TGFA-IT1-201ENST00000441238 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
TGFA-IT1-201ENST00000441238 C3orf67Q6ZVT6 689 aa13.18□□□□□ -0.3
TGFA-IT1-201ENST00000441238 RPGRQ92834 1020 aaKnown RBP13.18□□□□□ -0.3
TGFA-IT1-201ENST00000441238 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
TGFA-IT1-201ENST00000441238 PSMD1Q99460 953 aa13.18□□□□□ -0.3
TGFA-IT1-201ENST00000441238 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
TGFA-IT1-201ENST00000441238 SH3TC1Q8TE82 1336 aa13.17□□□□□ -0.3
TGFA-IT1-201ENST00000441238 SYNE4Q8N205 404 aa13.17□□□□□ -0.3
TGFA-IT1-201ENST00000441238 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
TGFA-IT1-201ENST00000441238 TRMT112Q9UI30 125 aaKnown RBP13.17□□□□□ -0.3
TGFA-IT1-201ENST00000441238 SCN4AP35499 1836 aa13.17□□□□□ -0.3
TGFA-IT1-201ENST00000441238 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
TGFA-IT1-201ENST00000441238 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
TGFA-IT1-201ENST00000441238 OLFM4Q6UX06 510 aa13.16□□□□□ -0.3
TGFA-IT1-201ENST00000441238 RBM46Q8TBY0 533 aaKnown RBP13.16□□□□□ -0.3
TGFA-IT1-201ENST00000441238 RRAGCQ9HB90 399 aa13.16□□□□□ -0.3
TGFA-IT1-201ENST00000441238 LRRC37AA6NMS7 1700 aa13.16□□□□□ -0.3
TGFA-IT1-201ENST00000441238 MYH3P11055 1940 aa13.15□□□□□ -0.3
TGFA-IT1-201ENST00000441238 POTECB2RU33 542 aa13.15□□□□□ -0.3
TGFA-IT1-201ENST00000441238 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
TGFA-IT1-201ENST00000441238 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
TGFA-IT1-201ENST00000441238 FANCIQ9NVI1 1328 aa13.14□□□□□ -0.31
TGFA-IT1-201ENST00000441238 SENP3-EIF4A1A0A087X0R7 540 aa13.14□□□□□ -0.31
TGFA-IT1-201ENST00000441238 ATP5J2-PTCD1G3V325 749 aa13.14□□□□□ -0.31
TGFA-IT1-201ENST00000441238 BBOX1O75936 387 aa13.14□□□□□ -0.31
TGFA-IT1-201ENST00000441238 VEGFAP15692 232 aaPredicted RBP13.14□□□□□ -0.31
TGFA-IT1-201ENST00000441238 HSPA6P17066 643 aa13.14□□□□□ -0.31
TGFA-IT1-201ENST00000441238 SF3B3Q15393 1217 aaKnown RBP13.14□□□□□ -0.31
TGFA-IT1-201ENST00000441238 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
TGFA-IT1-201ENST00000441238 CCDC191Q8NCU4 936 aa13.14□□□□□ -0.31
TGFA-IT1-201ENST00000441238 METTL22Q9BUU2 404 aaPredicted RBP13.14□□□□□ -0.31
TGFA-IT1-201ENST00000441238 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
TGFA-IT1-201ENST00000441238 ABCC4O15439 1325 aa13.13□□□□□ -0.31
TGFA-IT1-201ENST00000441238 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
TGFA-IT1-201ENST00000441238 PPEF1O14829 653 aaPredicted RBP13.13□□□□□ -0.31
TGFA-IT1-201ENST00000441238 DDX58O95786 925 aaKnown RBP13.13□□□□□ -0.31
TGFA-IT1-201ENST00000441238 IARSP41252 1262 aaKnown RBP13.13□□□□□ -0.31
TGFA-IT1-201ENST00000441238 FSTL1Q12841 308 aa13.13□□□□□ -0.31
TGFA-IT1-201ENST00000441238 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
TGFA-IT1-201ENST00000441238 FAM9BQ8IZU0 186 aa13.13□□□□□ -0.31
TGFA-IT1-201ENST00000441238 ZBTB38Q8NAP3 1195 aaPredicted RBP13.13□□□□□ -0.31
TGFA-IT1-201ENST00000441238 FAM89AQ96GI7 184 aa13.13□□□□□ -0.31
TGFA-IT1-201ENST00000441238 ZNF277Q9NRM2 450 aaPredicted RBP13.13□□□□□ -0.31
TGFA-IT1-201ENST00000441238 FZD9O00144 591 aa13.12□□□□□ -0.31
TGFA-IT1-201ENST00000441238 VAMP4O75379 141 aa13.12□□□□□ -0.31
TGFA-IT1-201ENST00000441238 KSR2Q6VAB6 950 aa13.12□□□□□ -0.31
TGFA-IT1-201ENST00000441238 TMC4Q7Z404 712 aa13.12□□□□□ -0.31
TGFA-IT1-201ENST00000441238 L3MBTL3Q96JM7 780 aaPredicted RBP13.12□□□□□ -0.31
TGFA-IT1-201ENST00000441238 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
TGFA-IT1-201ENST00000441238 RTFDC1Q9BY42 306 aaPredicted RBP13.12□□□□□ -0.31
TGFA-IT1-201ENST00000441238 VPS33BQ9H267 617 aa13.12□□□□□ -0.31
TGFA-IT1-201ENST00000441238 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
TGFA-IT1-201ENST00000441238 COL4A5P29400 1685 aa13.12□□□□□ -0.31
TGFA-IT1-201ENST00000441238 PI4KAP2A4QPH2 592 aa13.11□□□□□ -0.31
TGFA-IT1-201ENST00000441238 IRS4O14654 1257 aaPredicted RBP13.11□□□□□ -0.31
TGFA-IT1-201ENST00000441238 PCCAP05165 728 aaPredicted RBP13.11□□□□□ -0.31
TGFA-IT1-201ENST00000441238 GRAPQ13588 217 aa13.11□□□□□ -0.31
TGFA-IT1-201ENST00000441238 DDX46Q7L014 1031 aaKnown RBP13.11□□□□□ -0.31
TGFA-IT1-201ENST00000441238 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
TGFA-IT1-201ENST00000441238 PI4KAP1Q8N8J0 262 aa13.11□□□□□ -0.31
TGFA-IT1-201ENST00000441238 GRAPLQ8TC17 118 aaPredicted RBP13.11□□□□□ -0.31
TGFA-IT1-201ENST00000441238 LTBP1Q14766 1721 aa13.1□□□□□ -0.31
TGFA-IT1-201ENST00000441238 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
TGFA-IT1-201ENST00000441238 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms