RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 G2E3Q7L622 706 aa20.48■□□□□ 0.87
TRAPPC12-209ENST00000441099 RNF123Q5XPI4 1314 aa20.48■□□□□ 0.87
TRAPPC12-209ENST00000441099 E9PSI1 815 aa20.47■□□□□ 0.87
TRAPPC12-209ENST00000441099 DDX58O95786 925 aaKnown RBP20.47■□□□□ 0.87
TRAPPC12-209ENST00000441099 C3orf67Q6ZVT6 689 aa20.47■□□□□ 0.87
TRAPPC12-209ENST00000441099 SYNE4Q8N205 404 aa20.47■□□□□ 0.87
TRAPPC12-209ENST00000441099 ZNF784Q8NCA9 323 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC12-209ENST00000441099 TRMT112Q9UI30 125 aaKnown RBP20.47■□□□□ 0.87
TRAPPC12-209ENST00000441099 SLFN5Q08AF3 891 aa20.46■□□□□ 0.87
TRAPPC12-209ENST00000441099 PRPF40BQ6NWY9 871 aaKnown RBP20.46■□□□□ 0.87
TRAPPC12-209ENST00000441099 C21orf2O43822 256 aa20.45■□□□□ 0.86
TRAPPC12-209ENST00000441099 KSR2Q6VAB6 950 aa20.45■□□□□ 0.86
TRAPPC12-209ENST00000441099 C7orf43Q8WVR3 580 aa20.45■□□□□ 0.86
TRAPPC12-209ENST00000441099 ZNF428Q96B54 188 aa20.45■□□□□ 0.86
TRAPPC12-209ENST00000441099 METTL22Q9BUU2 404 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC12-209ENST00000441099 PI4KAP2A4QPH2 592 aa20.44■□□□□ 0.86
TRAPPC12-209ENST00000441099 HOXA10P31260 410 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC12-209ENST00000441099 PI4KAP1Q8N8J0 262 aa20.44■□□□□ 0.86
TRAPPC12-209ENST00000441099 CDCA7LQ96GN5 454 aa20.44■□□□□ 0.86
TRAPPC12-209ENST00000441099 MYD88Q99836 296 aa20.44■□□□□ 0.86
TRAPPC12-209ENST00000441099 ZNF219Q9P2Y4 722 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC12-209ENST00000441099 MAP3K2Q9Y2U5 619 aa20.44■□□□□ 0.86
TRAPPC12-209ENST00000441099 SH3TC1Q8TE82 1336 aa20.44■□□□□ 0.86
TRAPPC12-209ENST00000441099 ADCY9O60503 1353 aa20.44■□□□□ 0.86
TRAPPC12-209ENST00000441099 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
TRAPPC12-209ENST00000441099 HCLS1P14317 486 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC12-209ENST00000441099 FLIIQ13045 1269 aa20.43■□□□□ 0.86
TRAPPC12-209ENST00000441099 TRMT2AQ8IZ69 625 aaKnown RBP20.43■□□□□ 0.86
TRAPPC12-209ENST00000441099 NLRP3Q96P20 1036 aa20.43■□□□□ 0.86
TRAPPC12-209ENST00000441099 NFKBIEO00221 500 aa20.42■□□□□ 0.86
TRAPPC12-209ENST00000441099 ALDH1B1P30837 517 aa20.42■□□□□ 0.86
TRAPPC12-209ENST00000441099 RASSF7Q02833 373 aa20.42■□□□□ 0.86
TRAPPC12-209ENST00000441099 FAM89AQ96GI7 184 aa20.42■□□□□ 0.86
TRAPPC12-209ENST00000441099 PRELPP51888 382 aa20.41■□□□□ 0.86
TRAPPC12-209ENST00000441099 C9orf131Q5VYM1 1079 aa20.41■□□□□ 0.86
TRAPPC12-209ENST00000441099 CCDC191Q8NCU4 936 aa20.41■□□□□ 0.86
TRAPPC12-209ENST00000441099 RPGRQ92834 1020 aaKnown RBP20.41■□□□□ 0.86
TRAPPC12-209ENST00000441099 IGKV5-2P06315 115 aa20.4■□□□□ 0.86
TRAPPC12-209ENST00000441099 BRCA1P38398 1863 aaKnown RBP20.4■□□□□ 0.86
TRAPPC12-209ENST00000441099 NUP98P52948 1817 aa20.4■□□□□ 0.86
TRAPPC12-209ENST00000441099 CRAMP1Q96RY5 1269 aa20.4■□□□□ 0.86
TRAPPC12-209ENST00000441099 COL11A2P13942 1736 aaPredicted RBP20.39■□□□□ 0.86
TRAPPC12-209ENST00000441099 SOGA3Q5TF21 947 aa20.39■□□□□ 0.85
TRAPPC12-209ENST00000441099 ZBTB38Q8NAP3 1195 aaPredicted RBP20.39■□□□□ 0.85
TRAPPC12-209ENST00000441099 RBM17Q96I25 401 aaKnown RBP20.39■□□□□ 0.85
TRAPPC12-209ENST00000441099 FKBP5Q13451 457 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC12-209ENST00000441099 RTL5Q5HYW3 569 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC12-209ENST00000441099 OLFM4Q6UX06 510 aa20.38■□□□□ 0.85
TRAPPC12-209ENST00000441099 CWC25Q9NXE8 425 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC12-209ENST00000441099 RNF181Q9P0P0 153 aa20.38■□□□□ 0.85
TRAPPC12-209ENST00000441099 IRS4O14654 1257 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC12-209ENST00000441099 TNRC6CQ9HCJ0 1690 aaKnown RBP20.37■□□□□ 0.85
TRAPPC12-209ENST00000441099 LTBP3Q9NS15 1303 aa20.36■□□□□ 0.85
TRAPPC12-209ENST00000441099 PCCAP05165 728 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC12-209ENST00000441099 LMNB1P20700 586 aa20.36■□□□□ 0.85
TRAPPC12-209ENST00000441099 NEXNQ0ZGT2 675 aa20.36■□□□□ 0.85
TRAPPC12-209ENST00000441099 CCDC93Q567U6 631 aa20.36■□□□□ 0.85
TRAPPC12-209ENST00000441099 DNAAF4Q8WXU2 420 aa20.36■□□□□ 0.85
TRAPPC12-209ENST00000441099 DLEC1Q9Y238 1755 aa20.36■□□□□ 0.85
TRAPPC12-209ENST00000441099 NEURL1BA8MQ27 555 aa20.35■□□□□ 0.85
TRAPPC12-209ENST00000441099 SF3B3Q15393 1217 aaKnown RBP20.35■□□□□ 0.85
TRAPPC12-209ENST00000441099 CWF19L2Q2TBE0 894 aaKnown RBP20.35■□□□□ 0.85
TRAPPC12-209ENST00000441099 ABCC4O15439 1325 aa20.34■□□□□ 0.85
TRAPPC12-209ENST00000441099 SLC51AQ86UW1 340 aa20.34■□□□□ 0.85
TRAPPC12-209ENST00000441099 MRPL50Q8N5N7 158 aaKnown RBP20.34■□□□□ 0.85
TRAPPC12-209ENST00000441099 JARID2Q92833 1246 aaPredicted RBP20.34■□□□□ 0.85
TRAPPC12-209ENST00000441099 TAOK3Q9H2K8 898 aa20.34■□□□□ 0.85
TRAPPC12-209ENST00000441099 ARFGEF1Q9Y6D6 1849 aa20.33■□□□□ 0.85
TRAPPC12-209ENST00000441099 F6X3S4 739 aa20.33■□□□□ 0.85
TRAPPC12-209ENST00000441099 PPEF1O14829 653 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC12-209ENST00000441099 CC2D2BQ6DHV5 1058 aa20.33■□□□□ 0.85
TRAPPC12-209ENST00000441099 RTKN2Q8IZC4 609 aa20.33■□□□□ 0.85
TRAPPC12-209ENST00000441099 FKBP4Q02790 459 aaKnown RBP eCLIP20.32■□□□□ 0.84
TRAPPC12-209ENST00000441099 DDX46Q7L014 1031 aaKnown RBP20.32■□□□□ 0.84
TRAPPC12-209ENST00000441099 LINS1Q8NG48 757 aa20.32■□□□□ 0.84
TRAPPC12-209ENST00000441099 SSH1Q8WYL5 1049 aa20.32■□□□□ 0.84
TRAPPC12-209ENST00000441099 SNED1Q8TER0 1413 aa20.32■□□□□ 0.84
TRAPPC12-209ENST00000441099 BBOX1O75936 387 aa20.31■□□□□ 0.84
TRAPPC12-209ENST00000441099 HNRNPUQ00839 825 aaKnown RBP eCLIP20.31■□□□□ 0.84
TRAPPC12-209ENST00000441099 GRAPQ13588 217 aa20.31■□□□□ 0.84
TRAPPC12-209ENST00000441099 GCKRQ14397 625 aa20.31■□□□□ 0.84
TRAPPC12-209ENST00000441099 BEND3Q5T5X7 828 aa20.31■□□□□ 0.84
TRAPPC12-209ENST00000441099 GRAPLQ8TC17 118 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC12-209ENST00000441099 ZNF526Q8TF50 670 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC12-209ENST00000441099 CDHR2Q9BYE9 1310 aa20.3■□□□□ 0.84
TRAPPC12-209ENST00000441099 SLX4Q8IY92 1834 aa20.3■□□□□ 0.84
TRAPPC12-209ENST00000441099 CHD4Q14839 1912 aa20.3■□□□□ 0.84
TRAPPC12-209ENST00000441099 H7C1W4 665 aa20.3■□□□□ 0.84
TRAPPC12-209ENST00000441099 PDE8AO60658 829 aa20.3■□□□□ 0.84
TRAPPC12-209ENST00000441099 CT47B1P0C2W7 299 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC12-209ENST00000441099 HSP90B1P14625 803 aaKnown RBP20.3■□□□□ 0.84
TRAPPC12-209ENST00000441099 GPBP1L1Q9HC44 474 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC12-209ENST00000441099 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
TRAPPC12-209ENST00000441099 ARFGEF2Q9Y6D5 1785 aa20.29■□□□□ 0.84
TRAPPC12-209ENST00000441099 ALDH1L2Q3SY69 923 aa20.29■□□□□ 0.84
TRAPPC12-209ENST00000441099 PSMD1Q99460 953 aa20.29■□□□□ 0.84
TRAPPC12-209ENST00000441099 ANKRD36CQ5JPF3 1778 aa20.29■□□□□ 0.84
TRAPPC12-209ENST00000441099 ZC3H4Q9UPT8 1303 aaKnown RBP20.28■□□□□ 0.84
TRAPPC12-209ENST00000441099 GRIPAP1Q4V328 841 aa20.28■□□□□ 0.84
TRAPPC12-209ENST00000441099 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms