RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 GRM8O00222 908 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 ZPR1O75312 459 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 C4AP0C0L4 1744 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 NBPF7P0C2Y1 421 aaPredicted RBP12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 RFC4P35249 363 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 USPL1Q5W0Q7 1092 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 B4GALNT3Q6L9W6 998 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 CLEC4GQ6UXB4 293 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 CCDC136Q96JN2 1154 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 TFCP2L1Q9NZI6 479 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 SRP68Q9UHB9 627 aaKnown RBP12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
AP004290.1-201ENST00000440915 USP42Q9H9J4 1324 aaKnown RBP12.92□□□□□ -0.34
AP004290.1-201ENST00000440915 GNAI2P04899 355 aa12.92□□□□□ -0.34
AP004290.1-201ENST00000440915 UBTFL1P0CB47 393 aaPredicted RBP12.92□□□□□ -0.34
AP004290.1-201ENST00000440915 GPTP24298 496 aa12.92□□□□□ -0.34
AP004290.1-201ENST00000440915 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
AP004290.1-201ENST00000440915 H7C1W4 665 aa12.91□□□□□ -0.34
AP004290.1-201ENST00000440915 NLRP10Q86W26 655 aa12.91□□□□□ -0.34
AP004290.1-201ENST00000440915 UBN2Q6ZU65 1347 aa12.91□□□□□ -0.34
AP004290.1-201ENST00000440915 SLC15A2Q16348 729 aa12.9□□□□□ -0.34
AP004290.1-201ENST00000440915 JARID2Q92833 1246 aaPredicted RBP12.9□□□□□ -0.34
AP004290.1-201ENST00000440915 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
AP004290.1-201ENST00000440915 STK32BQ9NY57 414 aa12.9□□□□□ -0.34
AP004290.1-201ENST00000440915 NIP7Q9Y221 180 aaKnown RBP eCLIP12.9□□□□□ -0.34
AP004290.1-201ENST00000440915 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
AP004290.1-201ENST00000440915 TUBGCP6Q96RT7 1819 aa12.9□□□□□ -0.34
AP004290.1-201ENST00000440915 IGHDP01880 384 aa12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 CASP7P55210 303 aa12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 PARP10Q53GL7 1025 aa12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 TBC1D9BQ66K14 1250 aa12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 CEP85Q6P2H3 762 aa12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 COL23A1Q86Y22 540 aaPredicted RBP12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 RPAP2Q8IXW5 612 aaPredicted RBP12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 FLAD1Q8NFF5 587 aa12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 SUCLG2Q96I99 432 aa12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 HDAC5Q9UQL6 1122 aa12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 PNPLA7Q6ZV29 1317 aa12.89□□□□□ -0.35
AP004290.1-201ENST00000440915 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 GYS1P13807 737 aa12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 SUSD4Q5VX71 490 aa12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 UBE3BQ7Z3V4 1068 aa12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 SIRT2Q8IXJ6 389 aa12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 ANKRD44Q8N8A2 993 aa12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 KAZALD1Q96I82 304 aa12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 CAPN15O75808 1086 aa12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 ATP8B2P98198 1209 aa12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 HDAC1Q13547 482 aaPredicted RBP12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 BICDL1Q6ZP65 573 aa12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 TRMT112Q9UI30 125 aaKnown RBP12.88□□□□□ -0.35
AP004290.1-201ENST00000440915 FAM177BA6PVY3 158 aa12.87□□□□□ -0.35
AP004290.1-201ENST00000440915 PPP1R42Q7Z4L9 355 aa12.87□□□□□ -0.35
AP004290.1-201ENST00000440915 FAM89AQ96GI7 184 aa12.87□□□□□ -0.35
AP004290.1-201ENST00000440915 SETDB2Q96T68 719 aa12.87□□□□□ -0.35
AP004290.1-201ENST00000440915 UTP14AQ9BVJ6 771 aaKnown RBP12.87□□□□□ -0.35
AP004290.1-201ENST00000440915 BICC1Q9H694 974 aaKnown RBP12.87□□□□□ -0.35
AP004290.1-201ENST00000440915 KDM2BQ8NHM5 1336 aa12.86□□□□□ -0.35
AP004290.1-201ENST00000440915 CDHR2Q9BYE9 1310 aa12.86□□□□□ -0.35
AP004290.1-201ENST00000440915 QSER1Q2KHR3 1735 aa12.86□□□□□ -0.35
AP004290.1-201ENST00000440915 NTSR2O95665 410 aa12.86□□□□□ -0.35
AP004290.1-201ENST00000440915 EPHA10Q5JZY3 1008 aa12.86□□□□□ -0.35
AP004290.1-201ENST00000440915 ILDR2Q71H61 639 aa12.86□□□□□ -0.35
AP004290.1-201ENST00000440915 SYNE4Q8N205 404 aa12.86□□□□□ -0.35
AP004290.1-201ENST00000440915 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
AP004290.1-201ENST00000440915 FOXO4P98177 505 aa12.85□□□□□ -0.35
AP004290.1-201ENST00000440915 NFIXQ14938 502 aa12.85□□□□□ -0.35
AP004290.1-201ENST00000440915 CENPQQ7L2Z9 268 aaPredicted RBP12.85□□□□□ -0.35
AP004290.1-201ENST00000440915 SH3TC1Q8TE82 1336 aa12.85□□□□□ -0.35
AP004290.1-201ENST00000440915 PNMA6EA0A0J9YXQ4 647 aa12.84□□□□□ -0.35
AP004290.1-201ENST00000440915 IRS4O14654 1257 aaPredicted RBP12.84□□□□□ -0.35
AP004290.1-201ENST00000440915 HMMRO75330 724 aa12.84□□□□□ -0.35
AP004290.1-201ENST00000440915 TM4SF1P30408 202 aa12.84□□□□□ -0.35
AP004290.1-201ENST00000440915 MTX1Q13505 466 aa12.84□□□□□ -0.35
AP004290.1-201ENST00000440915 RABL6Q3YEC7 729 aaPredicted RBP12.84□□□□□ -0.35
AP004290.1-201ENST00000440915 SSH3Q8TE77 659 aa12.84□□□□□ -0.35
AP004290.1-201ENST00000440915 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
AP004290.1-201ENST00000440915 NYXQ9GZU5 481 aa12.84□□□□□ -0.35
AP004290.1-201ENST00000440915 SRGAP3O43295 1099 aa12.83□□□□□ -0.36
AP004290.1-201ENST00000440915 POLA2Q14181 598 aa12.83□□□□□ -0.36
AP004290.1-201ENST00000440915 NLGN1Q8N2Q7 840 aa12.83□□□□□ -0.36
AP004290.1-201ENST00000440915 CARMIL3Q8ND23 1372 aa12.83□□□□□ -0.36
AP004290.1-201ENST00000440915 PDE8AO60658 829 aa12.82□□□□□ -0.36
AP004290.1-201ENST00000440915 ERFEQ4G0M1 354 aa12.82□□□□□ -0.36
AP004290.1-201ENST00000440915 LMBR1LQ6UX01 489 aa12.82□□□□□ -0.36
AP004290.1-201ENST00000440915 TPTE2Q6XPS3 522 aa12.82□□□□□ -0.36
AP004290.1-201ENST00000440915 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
AP004290.1-201ENST00000440915 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
AP004290.1-201ENST00000440915 CSF1RP07333 972 aa12.81□□□□□ -0.36
AP004290.1-201ENST00000440915 HCLS1P14317 486 aaPredicted RBP12.81□□□□□ -0.36
AP004290.1-201ENST00000440915 GCC1Q96CN9 775 aa12.81□□□□□ -0.36
AP004290.1-201ENST00000440915 DCTPP1Q9H773 170 aa12.81□□□□□ -0.36
AP004290.1-201ENST00000440915 POLRMTO00411 1230 aaKnown RBP12.8□□□□□ -0.36
AP004290.1-201ENST00000440915 SERPINB2P05120 415 aa12.8□□□□□ -0.36
AP004290.1-201ENST00000440915 HSP90B1P14625 803 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms