RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 JMYQ8N9B5 988 aa13.36□□□□□ -0.27
CCBE1-202ENST00000439986 NOL7Q9UMY1 257 aaKnown RBP13.36□□□□□ -0.27
CCBE1-202ENST00000439986 ATP10BO94823 1461 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 DYTNA2CJ06 578 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 GNAT3A8MTJ3 354 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 NOLC1Q14978 699 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCBE1-202ENST00000439986 UBA5Q9GZZ9 404 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 DACH1Q9UI36 760 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 AP1ARQ63HQ0 302 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 WDR75Q8IWA0 830 aaKnown RBP13.35□□□□□ -0.27
CCBE1-202ENST00000439986 TTC16Q8NEE8 873 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 GJB2P29033 226 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 GIMAP6Q6P9H5 292 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 PDE1AP54750 535 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 FLIIQ13045 1269 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 ANKRD18AQ8IVF6 992 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 EIF2AK4Q9P2K8 1649 aaKnown RBP13.35□□□□□ -0.27
CCBE1-202ENST00000439986 CCDC102AQ96A19 550 aa13.35□□□□□ -0.27
CCBE1-202ENST00000439986 CCDC113Q9H0I3 377 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 ATICP31939 592 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
CCBE1-202ENST00000439986 SESN3P58005 492 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 C8orf58Q8NAV2 365 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 MNAT1P51948 309 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 ZC3H6P61129 1189 aaKnown RBP13.34□□□□□ -0.27
CCBE1-202ENST00000439986 GUCY1B3Q02153 619 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 IDI1Q13907 227 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 NBPF7P0C2Y1 421 aaPredicted RBP13.34□□□□□ -0.27
CCBE1-202ENST00000439986 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 UBXN4Q92575 508 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 MINDY4BA8MYZ0 360 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
CCBE1-202ENST00000439986 FEZ1Q99689 392 aa13.34□□□□□ -0.27
CCBE1-202ENST00000439986 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
CCBE1-202ENST00000439986 TFIP11Q9UBB9 837 aaKnown RBP13.34□□□□□ -0.27
CCBE1-202ENST00000439986 KIF18AQ8NI77 898 aa13.33□□□□□ -0.27
CCBE1-202ENST00000439986 VIMP08670 466 aaKnown RBP13.33□□□□□ -0.28
CCBE1-202ENST00000439986 CCDC82Q8N4S0 544 aa13.33□□□□□ -0.28
CCBE1-202ENST00000439986 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.28
CCBE1-202ENST00000439986 TSPYL6Q8N831 410 aa13.33□□□□□ -0.28
CCBE1-202ENST00000439986 A2MP01023 1474 aa13.33□□□□□ -0.28
CCBE1-202ENST00000439986 SFPQP23246 707 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCBE1-202ENST00000439986 CNPY2Q9Y2B0 182 aa13.33□□□□□ -0.28
CCBE1-202ENST00000439986 NPC1L1Q9UHC9 1359 aa13.33□□□□□ -0.28
CCBE1-202ENST00000439986 VAMP4O75379 141 aa13.33□□□□□ -0.28
CCBE1-202ENST00000439986 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
CCBE1-202ENST00000439986 PRPHP41219 470 aa13.33□□□□□ -0.28
CCBE1-202ENST00000439986 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.28
CCBE1-202ENST00000439986 DCTPP1Q9H773 170 aa13.33□□□□□ -0.28
CCBE1-202ENST00000439986 KIF2AO00139 706 aaPredicted RBP13.33□□□□□ -0.28
CCBE1-202ENST00000439986 ESYT1Q9BSJ8 1104 aa13.33□□□□□ -0.28
CCBE1-202ENST00000439986 DDX19AQ9NUU7 478 aaKnown RBP13.33□□□□□ -0.28
CCBE1-202ENST00000439986 ADGRL1O94910 1474 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 KLHL10Q6JEL2 608 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 BIN2Q9UBW5 565 aaPredicted RBP13.32□□□□□ -0.28
CCBE1-202ENST00000439986 BOLA2Q9H3K6 86 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 GOPCQ9HD26 462 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 TAF7Q15545 349 aaPredicted RBP13.32□□□□□ -0.28
CCBE1-202ENST00000439986 SYCP2Q9BX26 1530 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 CXorf38Q8TB03 319 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 RBSNQ9H1K0 784 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 SHANK2Q9UPX8 1470 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 CBFA2T2O43439 604 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 PPFIA3O75145 1194 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 ZNF165P49910 485 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 FAM114A1Q8IWE2 563 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 ANO10Q9NW15 660 aa13.32□□□□□ -0.28
CCBE1-202ENST00000439986 TRMT1Q9NXH9 659 aaKnown RBP13.32□□□□□ -0.28
CCBE1-202ENST00000439986 AIDAQ96BJ3 306 aa13.31□□□□□ -0.28
CCBE1-202ENST00000439986 SATB2Q9UPW6 733 aa13.31□□□□□ -0.28
CCBE1-202ENST00000439986 ZSCAN25Q6NSZ9 544 aa13.31□□□□□ -0.28
CCBE1-202ENST00000439986 NUCKS1Q9H1E3 243 aaKnown RBP13.31□□□□□ -0.28
CCBE1-202ENST00000439986 POLR3DP05423 398 aaPredicted RBP13.31□□□□□ -0.28
CCBE1-202ENST00000439986 USP26Q9BXU7 913 aa13.31□□□□□ -0.28
CCBE1-202ENST00000439986 DUOX2Q9NRD8 1548 aa13.31□□□□□ -0.28
CCBE1-202ENST00000439986 CHMP2AO43633 222 aa13.31□□□□□ -0.28
CCBE1-202ENST00000439986 PTCD1O75127 700 aaKnown RBP13.31□□□□□ -0.28
CCBE1-202ENST00000439986 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
CCBE1-202ENST00000439986 IGHMBP2P38935 993 aaKnown RBP13.31□□□□□ -0.28
CCBE1-202ENST00000439986 LUC7LQ9NQ29 371 aaKnown RBP13.31□□□□□ -0.28
CCBE1-202ENST00000439986 METTL24Q5JXM2 366 aa13.3□□□□□ -0.28
CCBE1-202ENST00000439986 ZBTB7BO15156 539 aaPredicted RBP13.3□□□□□ -0.28
CCBE1-202ENST00000439986 CFAP100Q494V2 611 aa13.3□□□□□ -0.28
CCBE1-202ENST00000439986 RMDN2Q96LZ7 410 aa13.3□□□□□ -0.28
CCBE1-202ENST00000439986 GTPBP4Q9BZE4 634 aaKnown RBP13.3□□□□□ -0.28
CCBE1-202ENST00000439986 SMTNL1A8MU46 457 aa13.3□□□□□ -0.28
CCBE1-202ENST00000439986 TMCO3Q6UWJ1 677 aa13.3□□□□□ -0.28
CCBE1-202ENST00000439986 DRC1Q96MC2 740 aa13.3□□□□□ -0.28
CCBE1-202ENST00000439986 BMP2KQ9NSY1 1161 aaPredicted RBP13.3□□□□□ -0.28
CCBE1-202ENST00000439986 ANKIB1Q9P2G1 1089 aa13.3□□□□□ -0.28
CCBE1-202ENST00000439986 CRACR2BQ8N4Y2 399 aaPredicted RBP13.3□□□□□ -0.28
CCBE1-202ENST00000439986 SHTN1A0MZ66 631 aa13.29□□□□□ -0.28
CCBE1-202ENST00000439986 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
CCBE1-202ENST00000439986 PPP1R42Q7Z4L9 355 aa13.29□□□□□ -0.28
CCBE1-202ENST00000439986 USP6NLQ92738 828 aa13.29□□□□□ -0.28
CCBE1-202ENST00000439986 CCDC8Q9H0W5 538 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms