RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 C4AP0C0L4 1744 aa29.2■■■□□ 2.26
LONRF3-204ENST00000439603 H7C1W4 665 aa29.19■■■□□ 2.26
LONRF3-204ENST00000439603 UBE3BQ7Z3V4 1068 aa29.19■■■□□ 2.26
LONRF3-204ENST00000439603 RPAP2Q8IXW5 612 aaPredicted RBP29.19■■■□□ 2.26
LONRF3-204ENST00000439603 NIP7Q9Y221 180 aaKnown RBP eCLIP29.19■■■□□ 2.26
LONRF3-204ENST00000439603 UBN2Q6ZU65 1347 aa29.18■■■□□ 2.26
LONRF3-204ENST00000439603 CEP85Q6P2H3 762 aa29.18■■■□□ 2.26
LONRF3-204ENST00000439603 JARID2Q92833 1246 aaPredicted RBP29.18■■■□□ 2.26
LONRF3-204ENST00000439603 IGHDP01880 384 aa29.17■■■□□ 2.26
LONRF3-204ENST00000439603 CASP7P55210 303 aa29.17■■■□□ 2.26
LONRF3-204ENST00000439603 RWDD1Q9H446 243 aaPredicted RBP29.17■■■□□ 2.26
LONRF3-204ENST00000439603 PARP10Q53GL7 1025 aa29.17■■■□□ 2.26
LONRF3-204ENST00000439603 ANKRD44Q8N8A2 993 aa29.17■■■□□ 2.26
LONRF3-204ENST00000439603 FLAD1Q8NFF5 587 aa29.17■■■□□ 2.26
LONRF3-204ENST00000439603 SUCLG2Q96I99 432 aa29.17■■■□□ 2.26
LONRF3-204ENST00000439603 HDAC1Q13547 482 aaPredicted RBP29.16■■■□□ 2.26
LONRF3-204ENST00000439603 SIRT2Q8IXJ6 389 aa29.16■■■□□ 2.26
LONRF3-204ENST00000439603 PCCAP05165 728 aaPredicted RBP29.15■■■□□ 2.26
LONRF3-204ENST00000439603 SLC15A2Q16348 729 aa29.15■■■□□ 2.26
LONRF3-204ENST00000439603 ZBTB38Q8NAP3 1195 aaPredicted RBP29.15■■■□□ 2.26
LONRF3-204ENST00000439603 ANO8Q9HCE9 1232 aaPredicted RBP29.15■■■□□ 2.26
LONRF3-204ENST00000439603 STK32BQ9NY57 414 aa29.15■■■□□ 2.26
LONRF3-204ENST00000439603 TBC1D9BQ66K14 1250 aa29.14■■■□□ 2.26
LONRF3-204ENST00000439603 UPF1Q92900 1129 aaKnown RBP eCLIP29.14■■■□□ 2.26
LONRF3-204ENST00000439603 RTL5Q5HYW3 569 aaPredicted RBP29.14■■■□□ 2.26
LONRF3-204ENST00000439603 SUSD4Q5VX71 490 aa29.14■■■□□ 2.26
LONRF3-204ENST00000439603 KAZALD1Q96I82 304 aa29.14■■■□□ 2.26
LONRF3-204ENST00000439603 COL23A1Q86Y22 540 aaPredicted RBP29.13■■■□□ 2.25
LONRF3-204ENST00000439603 TRMT112Q9UI30 125 aaKnown RBP29.13■■■□□ 2.25
LONRF3-204ENST00000439603 ATP8B2P98198 1209 aa29.12■■■□□ 2.25
LONRF3-204ENST00000439603 FAM89AQ96GI7 184 aa29.12■■■□□ 2.25
LONRF3-204ENST00000439603 KDM2BQ8NHM5 1336 aa29.12■■■□□ 2.25
LONRF3-204ENST00000439603 GYS1P13807 737 aa29.12■■■□□ 2.25
LONRF3-204ENST00000439603 PPP1R42Q7Z4L9 355 aa29.12■■■□□ 2.25
LONRF3-204ENST00000439603 TUBGCP6Q96RT7 1819 aa29.11■■■□□ 2.25
LONRF3-204ENST00000439603 PNPLA7Q6ZV29 1317 aa29.11■■■□□ 2.25
LONRF3-204ENST00000439603 BICDL1Q6ZP65 573 aa29.11■■■□□ 2.25
LONRF3-204ENST00000439603 CENPQQ7L2Z9 268 aaPredicted RBP29.11■■■□□ 2.25
LONRF3-204ENST00000439603 SETDB2Q96T68 719 aa29.11■■■□□ 2.25
LONRF3-204ENST00000439603 UTP14AQ9BVJ6 771 aaKnown RBP29.11■■■□□ 2.25
LONRF3-204ENST00000439603 BICC1Q9H694 974 aaKnown RBP29.1■■■□□ 2.25
LONRF3-204ENST00000439603 FAM177BA6PVY3 158 aa29.09■■■□□ 2.25
LONRF3-204ENST00000439603 MSH5O43196 834 aa29.09■■■□□ 2.25
LONRF3-204ENST00000439603 HMMRO75330 724 aa29.09■■■□□ 2.25
LONRF3-204ENST00000439603 CDHR2Q9BYE9 1310 aa29.09■■■□□ 2.25
LONRF3-204ENST00000439603 PNMA6EA0A0J9YXQ4 647 aa29.08■■■□□ 2.25
LONRF3-204ENST00000439603 MTX1Q13505 466 aa29.08■■■□□ 2.25
LONRF3-204ENST00000439603 EPHA10Q5JZY3 1008 aa29.08■■■□□ 2.25
LONRF3-204ENST00000439603 SYNE4Q8N205 404 aa29.08■■■□□ 2.25
LONRF3-204ENST00000439603 NTSR2O95665 410 aa29.07■■■□□ 2.24
LONRF3-204ENST00000439603 SH3TC1Q8TE82 1336 aa29.07■■■□□ 2.24
LONRF3-204ENST00000439603 FOXO4P98177 505 aa29.06■■■□□ 2.24
LONRF3-204ENST00000439603 NFIXQ14938 502 aa29.06■■■□□ 2.24
LONRF3-204ENST00000439603 PLA2G12BQ9BX93 195 aa29.06■■■□□ 2.24
LONRF3-204ENST00000439603 SRGAP3O43295 1099 aa29.05■■■□□ 2.24
LONRF3-204ENST00000439603 RABL6Q3YEC7 729 aaPredicted RBP29.05■■■□□ 2.24
LONRF3-204ENST00000439603 SSH3Q8TE77 659 aa29.05■■■□□ 2.24
LONRF3-204ENST00000439603 IRS4O14654 1257 aaPredicted RBP29.04■■■□□ 2.24
LONRF3-204ENST00000439603 POLA2Q14181 598 aa29.04■■■□□ 2.24
LONRF3-204ENST00000439603 NYXQ9GZU5 481 aa29.04■■■□□ 2.24
LONRF3-204ENST00000439603 TM4SF1P30408 202 aa29.02■■■□□ 2.24
LONRF3-204ENST00000439603 NUTM1Q86Y26 1132 aa29.02■■■□□ 2.24
LONRF3-204ENST00000439603 NLGN1Q8N2Q7 840 aa29.02■■■□□ 2.24
LONRF3-204ENST00000439603 CARMIL3Q8ND23 1372 aa29.02■■■□□ 2.24
LONRF3-204ENST00000439603 QSER1Q2KHR3 1735 aa29.02■■■□□ 2.24
LONRF3-204ENST00000439603 LMBR1LQ6UX01 489 aa29.02■■■□□ 2.24
LONRF3-204ENST00000439603 NBPF5PQ86XG9 351 aaPredicted RBP29.02■■■□□ 2.24
LONRF3-204ENST00000439603 SMC5Q8IY18 1101 aa29.02■■■□□ 2.24
LONRF3-204ENST00000439603 DCTPP1Q9H773 170 aa29.02■■■□□ 2.24
LONRF3-204ENST00000439603 COL24A1Q17RW2 1714 aa29.01■■■□□ 2.23
LONRF3-204ENST00000439603 TPTE2Q6XPS3 522 aa29.01■■■□□ 2.23
LONRF3-204ENST00000439603 GCC1Q96CN9 775 aa29.01■■■□□ 2.23
LONRF3-204ENST00000439603 PDE8AO60658 829 aa29■■■□□ 2.23
LONRF3-204ENST00000439603 HSP90B1P14625 803 aaKnown RBP29■■■□□ 2.23
LONRF3-204ENST00000439603 GTF2E1P29083 439 aaPredicted RBP29■■■□□ 2.23
LONRF3-204ENST00000439603 ILDR2Q71H61 639 aa29■■■□□ 2.23
LONRF3-204ENST00000439603 ERFEQ4G0M1 354 aa28.99■■■□□ 2.23
LONRF3-204ENST00000439603 HCLS1P14317 486 aaPredicted RBP28.98■■■□□ 2.23
LONRF3-204ENST00000439603 CSF1RP07333 972 aa28.97■■■□□ 2.23
LONRF3-204ENST00000439603 CHMP3Q9Y3E7 222 aa28.97■■■□□ 2.23
LONRF3-204ENST00000439603 CTSWP56202 376 aa28.96■■■□□ 2.23
LONRF3-204ENST00000439603 SLC10A5Q5PT55 438 aa28.96■■■□□ 2.23
LONRF3-204ENST00000439603 TTLL11Q8NHH1 800 aa28.95■■■□□ 2.23
LONRF3-204ENST00000439603 POLRMTO00411 1230 aaKnown RBP28.94■■■□□ 2.22
LONRF3-204ENST00000439603 NPHP1O15259 732 aa28.94■■■□□ 2.22
LONRF3-204ENST00000439603 SERPINB2P05120 415 aa28.94■■■□□ 2.22
LONRF3-204ENST00000439603 DDR1Q08345 913 aa28.94■■■□□ 2.22
LONRF3-204ENST00000439603 SURF6O75683 361 aaKnown RBP28.93■■■□□ 2.22
LONRF3-204ENST00000439603 CNBD1Q8NA66 436 aa28.93■■■□□ 2.22
LONRF3-204ENST00000439603 EXOC6BQ9Y2D4 811 aa28.93■■■□□ 2.22
LONRF3-204ENST00000439603 RFX5P48382 616 aaPredicted RBP28.93■■■□□ 2.22
LONRF3-204ENST00000439603 MSL1Q68DK7 614 aa28.92■■■□□ 2.22
LONRF3-204ENST00000439603 NOP58Q9Y2X3 529 aaKnown RBP28.92■■■□□ 2.22
LONRF3-204ENST00000439603 DDX60Q8IY21 1712 aaKnown RBP28.92■■■□□ 2.22
LONRF3-204ENST00000439603 ABCC12Q96J65 1359 aa28.92■■■□□ 2.22
LONRF3-204ENST00000439603 CCDC85AQ96PX6 553 aaPredicted RBP28.91■■■□□ 2.22
LONRF3-204ENST00000439603 PDGFDQ9GZP0 370 aaPredicted RBP28.91■■■□□ 2.22
LONRF3-204ENST00000439603 PDZRN3Q9UPQ7 1066 aa28.91■■■□□ 2.22
LONRF3-204ENST00000439603 PA2G4Q9UQ80 394 aaKnown RBP28.91■■■□□ 2.22
LONRF3-204ENST00000439603 CCDC57Q2TAC2 916 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms