RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 NMIQ13287 307 aaPredicted RBP14.59□□□□□ -0.07
HDAC8-214ENST00000439122 ADCK5Q3MIX3 580 aa14.59□□□□□ -0.07
HDAC8-214ENST00000439122 FSD1Q9BTV5 496 aa14.59□□□□□ -0.07
HDAC8-214ENST00000439122 MRC1P22897 1456 aa14.59□□□□□ -0.07
HDAC8-214ENST00000439122 CCDC171Q6TFL3 1326 aa14.59□□□□□ -0.07
HDAC8-214ENST00000439122 MBD3O95983 291 aa14.58□□□□□ -0.08
HDAC8-214ENST00000439122 ZKSCAN1P17029 563 aaPredicted RBP14.58□□□□□ -0.08
HDAC8-214ENST00000439122 TMEM63CQ9P1W3 806 aa14.58□□□□□ -0.08
HDAC8-214ENST00000439122 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.58□□□□□ -0.08
HDAC8-214ENST00000439122 ABCC6O95255 1503 aa14.58□□□□□ -0.08
HDAC8-214ENST00000439122 PRIM1P49642 420 aaKnown RBP14.58□□□□□ -0.08
HDAC8-214ENST00000439122 PDRG1Q9NUG6 133 aa14.58□□□□□ -0.08
HDAC8-214ENST00000439122 CYP46A1Q9Y6A2 500 aa14.58□□□□□ -0.08
HDAC8-214ENST00000439122 A0A087WZG4 1122 aa14.57□□□□□ -0.08
HDAC8-214ENST00000439122 HSPA2P54652 639 aa14.57□□□□□ -0.08
HDAC8-214ENST00000439122 CCDC173Q0VFZ6 552 aa14.57□□□□□ -0.08
HDAC8-214ENST00000439122 NECTIN1Q15223 517 aa14.57□□□□□ -0.08
HDAC8-214ENST00000439122 DDX54Q8TDD1 881 aaKnown RBP14.57□□□□□ -0.08
HDAC8-214ENST00000439122 GDPD2Q9HCC8 539 aa14.57□□□□□ -0.08
HDAC8-214ENST00000439122 RBM8AQ9Y5S9 174 aaKnown RBP14.57□□□□□ -0.08
HDAC8-214ENST00000439122 CPDO75976 1380 aa14.57□□□□□ -0.08
HDAC8-214ENST00000439122 SYCE3A1L190 88 aa14.57□□□□□ -0.08
HDAC8-214ENST00000439122 VPS53Q5VIR6 699 aa14.57□□□□□ -0.08
HDAC8-214ENST00000439122 COPRSQ9NQ92 184 aa14.57□□□□□ -0.08
HDAC8-214ENST00000439122 PRDM11Q9NQV5 511 aa14.57□□□□□ -0.08
HDAC8-214ENST00000439122 SMC3Q9UQE7 1217 aa14.57□□□□□ -0.08
HDAC8-214ENST00000439122 RPAP1Q9BWH6 1393 aaPredicted RBP14.56□□□□□ -0.08
HDAC8-214ENST00000439122 PLEKHG2Q9H7P9 1386 aa14.56□□□□□ -0.08
HDAC8-214ENST00000439122 A0A0D9SFI3 127 aa14.56□□□□□ -0.08
HDAC8-214ENST00000439122 CREB3L3Q68CJ9 461 aa14.56□□□□□ -0.08
HDAC8-214ENST00000439122 TOM1L2Q6ZVM7 507 aa14.56□□□□□ -0.08
HDAC8-214ENST00000439122 ZSWIM6Q9HCJ5 1215 aa14.56□□□□□ -0.08
HDAC8-214ENST00000439122 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.56□□□□□ -0.08
HDAC8-214ENST00000439122 PKD1L3Q7Z443 1732 aa14.56□□□□□ -0.08
HDAC8-214ENST00000439122 LARGE1O95461 756 aa14.55□□□□□ -0.08
HDAC8-214ENST00000439122 PTPN12Q05209 780 aaKnown RBP14.55□□□□□ -0.08
HDAC8-214ENST00000439122 PLBD2Q8NHP8 589 aa14.55□□□□□ -0.08
HDAC8-214ENST00000439122 MAP4K1Q92918 833 aa14.55□□□□□ -0.08
HDAC8-214ENST00000439122 KCNB2Q92953 911 aa14.55□□□□□ -0.08
HDAC8-214ENST00000439122 TM6SF1Q9BZW5 370 aa14.55□□□□□ -0.08
HDAC8-214ENST00000439122 RBSNQ9H1K0 784 aa14.55□□□□□ -0.08
HDAC8-214ENST00000439122 AFDNP55196 1824 aaKnown RBP14.55□□□□□ -0.08
HDAC8-214ENST00000439122 ESPNB1AK53 854 aa14.55□□□□□ -0.08
HDAC8-214ENST00000439122 RFX5P48382 616 aaPredicted RBP14.55□□□□□ -0.08
HDAC8-214ENST00000439122 TFCP2Q12800 502 aa14.55□□□□□ -0.08
HDAC8-214ENST00000439122 BRINP3Q76B58 766 aa14.55□□□□□ -0.08
HDAC8-214ENST00000439122 CCDC83Q8IWF9 413 aa14.55□□□□□ -0.08
HDAC8-214ENST00000439122 STX6O43752 255 aa14.54□□□□□ -0.08
HDAC8-214ENST00000439122 SYT1P21579 422 aa14.54□□□□□ -0.08
HDAC8-214ENST00000439122 CLCN1P35523 988 aa14.54□□□□□ -0.08
HDAC8-214ENST00000439122 RABL6Q3YEC7 729 aaPredicted RBP14.54□□□□□ -0.08
HDAC8-214ENST00000439122 TNNI3KQ59H18 835 aa14.54□□□□□ -0.08
HDAC8-214ENST00000439122 LRSAM1Q6UWE0 723 aa14.54□□□□□ -0.08
HDAC8-214ENST00000439122 ZCRB1Q8TBF4 217 aaKnown RBP14.54□□□□□ -0.08
HDAC8-214ENST00000439122 EDC3Q96F86 508 aaKnown RBP14.54□□□□□ -0.08
HDAC8-214ENST00000439122 DBNLQ9UJU6 430 aaKnown RBP14.54□□□□□ -0.08
HDAC8-214ENST00000439122 FPGT-TNNI3KV9GXZ4 949 aa14.54□□□□□ -0.08
HDAC8-214ENST00000439122 PCDH11XQ9BZA7 1347 aa14.54□□□□□ -0.08
HDAC8-214ENST00000439122 PCDH11YQ9BZA8 1340 aa14.54□□□□□ -0.08
HDAC8-214ENST00000439122 ZSCAN22P10073 491 aaPredicted RBP14.54□□□□□ -0.08
HDAC8-214ENST00000439122 USP48Q86UV5 1035 aa14.54□□□□□ -0.08
HDAC8-214ENST00000439122 PPP1R9BQ96SB3 815 aa14.54□□□□□ -0.08
HDAC8-214ENST00000439122 CHMP3Q9Y3E7 222 aa14.54□□□□□ -0.08
HDAC8-214ENST00000439122 ERBB4Q15303 1308 aa14.53□□□□□ -0.08
HDAC8-214ENST00000439122 WDR17Q8IZU2 1322 aa14.53□□□□□ -0.08
HDAC8-214ENST00000439122 TCHHQ07283 1943 aa14.53□□□□□ -0.08
HDAC8-214ENST00000439122 SLC27A2O14975 620 aa14.53□□□□□ -0.08
HDAC8-214ENST00000439122 GADD45BO75293 160 aaPredicted RBP14.53□□□□□ -0.08
HDAC8-214ENST00000439122 ANO8Q9HCE9 1232 aaPredicted RBP14.53□□□□□ -0.08
HDAC8-214ENST00000439122 ARFGEF2Q9Y6D5 1785 aa14.53□□□□□ -0.08
HDAC8-214ENST00000439122 NBPF26B4DH59 902 aa14.53□□□□□ -0.08
HDAC8-214ENST00000439122 DTNBO60941 627 aa14.53□□□□□ -0.08
HDAC8-214ENST00000439122 NBPF14Q5TI25 921 aa14.53□□□□□ -0.08
HDAC8-214ENST00000439122 RNF20Q5VTR2 975 aa14.53□□□□□ -0.08
HDAC8-214ENST00000439122 NBPF10Q6P3W6 841 aaKnown RBP14.53□□□□□ -0.08
HDAC8-214ENST00000439122 NBPF15Q8N660 670 aa14.53□□□□□ -0.08
HDAC8-214ENST00000439122 SYAP1Q96A49 352 aaPredicted RBP14.53□□□□□ -0.08
HDAC8-214ENST00000439122 ZSCAN31Q96LW9 406 aaPredicted RBP14.53□□□□□ -0.08
HDAC8-214ENST00000439122 SH2B1Q9NRF2 756 aaPredicted RBP14.53□□□□□ -0.08
HDAC8-214ENST00000439122 SNRKQ9NRH2 765 aa14.53□□□□□ -0.08
HDAC8-214ENST00000439122 ATP5JP18859 108 aa14.52□□□□□ -0.08
HDAC8-214ENST00000439122 PSMA5P28066 241 aa14.52□□□□□ -0.08
HDAC8-214ENST00000439122 GJB2P29033 226 aa14.52□□□□□ -0.08
HDAC8-214ENST00000439122 LMBR1LQ6UX01 489 aa14.52□□□□□ -0.08
HDAC8-214ENST00000439122 ZNF589Q86UQ0 364 aaPredicted RBP14.52□□□□□ -0.08
HDAC8-214ENST00000439122 NDUFB9Q9Y6M9 179 aa14.52□□□□□ -0.08
HDAC8-214ENST00000439122 ME3Q16798 604 aa14.52□□□□□ -0.09
HDAC8-214ENST00000439122 CNPY2Q9Y2B0 182 aa14.52□□□□□ -0.09
HDAC8-214ENST00000439122 MED23Q9ULK4 1368 aa14.51□□□□□ -0.09
HDAC8-214ENST00000439122 CASP7P55210 303 aa14.51□□□□□ -0.09
HDAC8-214ENST00000439122 TPRNQ4KMQ1 711 aa14.51□□□□□ -0.09
HDAC8-214ENST00000439122 TTLL7Q6ZT98 887 aa14.51□□□□□ -0.09
HDAC8-214ENST00000439122 NECAB1Q8N987 351 aa14.51□□□□□ -0.09
HDAC8-214ENST00000439122 DNAJC2Q99543 621 aaKnown RBP14.51□□□□□ -0.09
HDAC8-214ENST00000439122 DBNDD2Q9BQY9 259 aa14.51□□□□□ -0.09
HDAC8-214ENST00000439122 CCDC9Q9Y3X0 531 aaKnown RBP14.51□□□□□ -0.09
HDAC8-214ENST00000439122 COL15A1P39059 1388 aa14.51□□□□□ -0.09
HDAC8-214ENST00000439122 F13A1P00488 732 aa14.5□□□□□ -0.09
HDAC8-214ENST00000439122 A1BGP04217 495 aa14.5□□□□□ -0.09
HDAC8-214ENST00000439122 TPCN1Q9ULQ1 816 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms