RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 PRM3Q9NNZ6 103 aa12.38□□□□□ -0.43
LSMEM1-202ENST00000439068 NDUFB9Q9Y6M9 179 aa12.38□□□□□ -0.43
LSMEM1-202ENST00000439068 PEAK1Q9H792 1746 aa12.37□□□□□ -0.43
LSMEM1-202ENST00000439068 THSD4Q6ZMP0 1018 aa12.37□□□□□ -0.43
LSMEM1-202ENST00000439068 THAP11Q96EK4 314 aa12.37□□□□□ -0.43
LSMEM1-202ENST00000439068 KTN1Q86UP2 1357 aaKnown RBP12.37□□□□□ -0.43
LSMEM1-202ENST00000439068 HMGB2P26583 209 aaKnown RBP12.36□□□□□ -0.43
LSMEM1-202ENST00000439068 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
LSMEM1-202ENST00000439068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.36□□□□□ -0.43
LSMEM1-202ENST00000439068 USB1Q9BQ65 265 aaKnown RBP12.36□□□□□ -0.43
LSMEM1-202ENST00000439068 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
LSMEM1-202ENST00000439068 SBF2Q86WG5 1849 aa12.36□□□□□ -0.43
LSMEM1-202ENST00000439068 GIGYF1O75420 1035 aaPredicted RBP12.35□□□□□ -0.43
LSMEM1-202ENST00000439068 COPS2P61201 443 aa12.35□□□□□ -0.43
LSMEM1-202ENST00000439068 L3MBTL2Q969R5 705 aa12.35□□□□□ -0.43
LSMEM1-202ENST00000439068 TFCP2L1Q9NZI6 479 aa12.35□□□□□ -0.43
LSMEM1-202ENST00000439068 LRRC37A3O60309 1634 aa12.35□□□□□ -0.43
LSMEM1-202ENST00000439068 MAP3K5Q99683 1374 aa12.34□□□□□ -0.43
LSMEM1-202ENST00000439068 CASZ1Q86V15 1759 aa12.34□□□□□ -0.43
LSMEM1-202ENST00000439068 NR1I2O75469 434 aa12.34□□□□□ -0.43
LSMEM1-202ENST00000439068 HDGFL2Q7Z4V5 671 aaPredicted RBP12.34□□□□□ -0.43
LSMEM1-202ENST00000439068 DDX54Q8TDD1 881 aaKnown RBP12.34□□□□□ -0.43
LSMEM1-202ENST00000439068 UTRNP46939 3433 aa12.34□□□□□ -0.43
LSMEM1-202ENST00000439068 POTEMA6NI47 508 aa12.33□□□□□ -0.44
LSMEM1-202ENST00000439068 GRIN3BO60391 1043 aa12.33□□□□□ -0.44
LSMEM1-202ENST00000439068 LYPD8Q6UX82 237 aa12.33□□□□□ -0.44
LSMEM1-202ENST00000439068 TMC1Q8TDI8 760 aa12.33□□□□□ -0.44
LSMEM1-202ENST00000439068 ANKRD24Q8TF21 1146 aa12.33□□□□□ -0.44
LSMEM1-202ENST00000439068 TNS2Q63HR2 1409 aa12.33□□□□□ -0.44
LSMEM1-202ENST00000439068 ROCK2O75116 1388 aaKnown RBP12.32□□□□□ -0.44
LSMEM1-202ENST00000439068 FMNL1O95466 1100 aaPredicted RBP12.32□□□□□ -0.44
LSMEM1-202ENST00000439068 WWC1Q8IX03 1113 aa12.32□□□□□ -0.44
LSMEM1-202ENST00000439068 SYTL4Q96C24 671 aaPredicted RBP12.32□□□□□ -0.44
LSMEM1-202ENST00000439068 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
LSMEM1-202ENST00000439068 COL18A1P39060 1754 aa12.32□□□□□ -0.44
LSMEM1-202ENST00000439068 AKAP12Q02952 1782 aa12.31□□□□□ -0.44
LSMEM1-202ENST00000439068 DESI1Q6ICB0 168 aa12.31□□□□□ -0.44
LSMEM1-202ENST00000439068 LRRC4BQ9NT99 713 aa12.31□□□□□ -0.44
LSMEM1-202ENST00000439068 TERF2IPQ9NYB0 399 aa12.31□□□□□ -0.44
LSMEM1-202ENST00000439068 MYOM1P52179 1685 aa12.31□□□□□ -0.44
LSMEM1-202ENST00000439068 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
LSMEM1-202ENST00000439068 VAC14Q08AM6 782 aa12.3□□□□□ -0.44
LSMEM1-202ENST00000439068 ZNF827Q17R98 1081 aa12.3□□□□□ -0.44
LSMEM1-202ENST00000439068 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
LSMEM1-202ENST00000439068 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
LSMEM1-202ENST00000439068 PIK3C2AO00443 1686 aa12.29□□□□□ -0.44
LSMEM1-202ENST00000439068 QRICH2Q9H0J4 1663 aa12.29□□□□□ -0.44
LSMEM1-202ENST00000439068 ABCC6O95255 1503 aa12.29□□□□□ -0.44
LSMEM1-202ENST00000439068 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
LSMEM1-202ENST00000439068 NME9Q86XW9 330 aa12.29□□□□□ -0.44
LSMEM1-202ENST00000439068 FAM160A2Q8N612 972 aaPredicted RBP12.29□□□□□ -0.44
LSMEM1-202ENST00000439068 IP6K1Q92551 441 aa12.29□□□□□ -0.44
LSMEM1-202ENST00000439068 CCDC97Q96F63 343 aaPredicted RBP12.29□□□□□ -0.44
LSMEM1-202ENST00000439068 CHD4Q14839 1912 aa12.29□□□□□ -0.44
LSMEM1-202ENST00000439068 PTPN5P54829 565 aa12.28□□□□□ -0.44
LSMEM1-202ENST00000439068 IFFO2Q5TF58 517 aa12.28□□□□□ -0.44
LSMEM1-202ENST00000439068 POTEGQ6S5H5 508 aa12.28□□□□□ -0.44
LSMEM1-202ENST00000439068 ADAMTS19Q8TE59 1207 aa12.28□□□□□ -0.44
LSMEM1-202ENST00000439068 GLMNQ92990 594 aa12.28□□□□□ -0.44
LSMEM1-202ENST00000439068 CALR3Q96L12 384 aaKnown RBP12.28□□□□□ -0.44
LSMEM1-202ENST00000439068 SERPINA10Q9UK55 444 aa12.28□□□□□ -0.44
LSMEM1-202ENST00000439068 TRPM1Q7Z4N2 1603 aa12.28□□□□□ -0.44
LSMEM1-202ENST00000439068 TLL1O43897 1013 aa12.27□□□□□ -0.45
LSMEM1-202ENST00000439068 JUNDP17535 347 aa12.27□□□□□ -0.45
LSMEM1-202ENST00000439068 LTV1Q96GA3 475 aaPredicted RBP12.27□□□□□ -0.45
LSMEM1-202ENST00000439068 AMPHP49418 695 aa12.26□□□□□ -0.45
LSMEM1-202ENST00000439068 HDGFL1Q5TGJ6 251 aa12.26□□□□□ -0.45
LSMEM1-202ENST00000439068 ZCRB1Q8TBF4 217 aaKnown RBP12.26□□□□□ -0.45
LSMEM1-202ENST00000439068 SPSB2Q99619 263 aa12.26□□□□□ -0.45
LSMEM1-202ENST00000439068 CARD11Q9BXL7 1154 aa12.26□□□□□ -0.45
LSMEM1-202ENST00000439068 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
LSMEM1-202ENST00000439068 PRDM9Q9NQV7 894 aa12.26□□□□□ -0.45
LSMEM1-202ENST00000439068 MAP10Q9P2G4 905 aa12.26□□□□□ -0.45
LSMEM1-202ENST00000439068 CCNL1Q9UK58 526 aaPredicted RBP12.26□□□□□ -0.45
LSMEM1-202ENST00000439068 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
LSMEM1-202ENST00000439068 NFAT5O94916 1531 aa12.26□□□□□ -0.45
LSMEM1-202ENST00000439068 FLAD1Q8NFF5 587 aa12.25□□□□□ -0.45
LSMEM1-202ENST00000439068 COG3Q96JB2 828 aa12.25□□□□□ -0.45
LSMEM1-202ENST00000439068 PUS7Q96PZ0 661 aaKnown RBP12.25□□□□□ -0.45
LSMEM1-202ENST00000439068 SIN3AQ96ST3 1273 aa12.25□□□□□ -0.45
LSMEM1-202ENST00000439068 RGPD5Q99666 1765 aa12.25□□□□□ -0.45
LSMEM1-202ENST00000439068 NHSQ6T4R5 1651 aa12.24□□□□□ -0.45
LSMEM1-202ENST00000439068 WNK3Q9BYP7 1800 aa12.24□□□□□ -0.45
LSMEM1-202ENST00000439068 ANKRD36BQ8N2N9 1353 aa12.23□□□□□ -0.45
LSMEM1-202ENST00000439068 USP47Q96K76 1375 aa12.23□□□□□ -0.45
LSMEM1-202ENST00000439068 F12P00748 615 aaPredicted RBP12.23□□□□□ -0.45
LSMEM1-202ENST00000439068 KCNQ4P56696 695 aa12.23□□□□□ -0.45
LSMEM1-202ENST00000439068 WASHC4Q2M389 1173 aa12.23□□□□□ -0.45
LSMEM1-202ENST00000439068 NLGN2Q8NFZ4 835 aa12.23□□□□□ -0.45
LSMEM1-202ENST00000439068 ZNF516Q92618 1163 aa12.23□□□□□ -0.45
LSMEM1-202ENST00000439068 MTRQ99707 1265 aa12.23□□□□□ -0.45
LSMEM1-202ENST00000439068 EDC4Q6P2E9 1401 aaKnown RBP12.22□□□□□ -0.45
LSMEM1-202ENST00000439068 SBNO2Q9Y2G9 1366 aa12.22□□□□□ -0.45
LSMEM1-202ENST00000439068 CGNL1Q0VF96 1302 aa12.22□□□□□ -0.45
LSMEM1-202ENST00000439068 CD2APQ9Y5K6 639 aa12.22□□□□□ -0.45
LSMEM1-202ENST00000439068 ZPR1O75312 459 aa12.21□□□□□ -0.45
LSMEM1-202ENST00000439068 CTHP32929 405 aa12.21□□□□□ -0.45
LSMEM1-202ENST00000439068 MSS51Q4VC12 460 aa12.21□□□□□ -0.45
LSMEM1-202ENST00000439068 COL23A1Q86Y22 540 aaPredicted RBP12.21□□□□□ -0.45
LSMEM1-202ENST00000439068 RAPGEF4Q8WZA2 1011 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms