RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, human

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCRN1-208	ENST00000438497	GRIPAP1	Q4V328	841 aa		11.67	□□□□□ -0.54
SCRN1-208	ENST00000438497	ADARB2	Q9NS39	739 aa	Known RBP	11.67	□□□□□ -0.54
SCRN1-208	ENST00000438497	THSD7B	Q9C0I4	1608 aa		11.67	□□□□□ -0.54
SCRN1-208	ENST00000438497	BTBD11	A6QL63	1104 aa		11.66	□□□□□ -0.54
SCRN1-208	ENST00000438497	TCERG1	O14776	1098 aa	Known RBP	11.66	□□□□□ -0.54
SCRN1-208	ENST00000438497	SOX10	P56693	466 aa		11.66	□□□□□ -0.54
SCRN1-208	ENST00000438497	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.66	□□□□□ -0.54
SCRN1-208	ENST00000438497	ZNF408	Q9H9D4	720 aa		11.66	□□□□□ -0.54
SCRN1-208	ENST00000438497	NIM1K	Q8IY84	436 aa		11.65	□□□□□ -0.54
SCRN1-208	ENST00000438497	ZIC5	Q96T25	663 aa		11.65	□□□□□ -0.54
SCRN1-208	ENST00000438497	GPRC5D	Q9NZD1	345 aa		11.65	□□□□□ -0.54
SCRN1-208	ENST00000438497	LTBP1	Q14766	1721 aa		11.65	□□□□□ -0.54
SCRN1-208	ENST00000438497	PRAMEF22	A3QJZ6	481 aa		11.64	□□□□□ -0.55
SCRN1-208	ENST00000438497	NPM3	O75607	178 aa	Known RBP	11.64	□□□□□ -0.55
SCRN1-208	ENST00000438497	NOG	Q13253	232 aa		11.64	□□□□□ -0.55
SCRN1-208	ENST00000438497	HLF	Q16534	295 aa		11.64	□□□□□ -0.55
SCRN1-208	ENST00000438497	PRPF38B	Q5VTL8	546 aa	Known RBP	11.64	□□□□□ -0.55
SCRN1-208	ENST00000438497	CDC37L1	Q7L3B6	337 aa		11.64	□□□□□ -0.55
SCRN1-208	ENST00000438497	GAS2L2	Q8NHY3	880 aa		11.64	□□□□□ -0.55
SCRN1-208	ENST00000438497	RPGR	Q92834	1020 aa	Known RBP	11.64	□□□□□ -0.55
SCRN1-208	ENST00000438497	PGAP2	Q9UHJ9	254 aa		11.64	□□□□□ -0.55
SCRN1-208	ENST00000438497	RGL2	O15211	777 aa		11.63	□□□□□ -0.55
SCRN1-208	ENST00000438497	SNRPA1	P09661	255 aa	Known RBP	11.63	□□□□□ -0.55
SCRN1-208	ENST00000438497	HOXA10	P31260	410 aa	Predicted RBP	11.63	□□□□□ -0.55
SCRN1-208	ENST00000438497	CXCL9	Q07325	125 aa		11.63	□□□□□ -0.55
SCRN1-208	ENST00000438497	ZC3H15	Q8WU90	426 aa	Known RBP	11.63	□□□□□ -0.55
SCRN1-208	ENST00000438497	NYX	Q9GZU5	481 aa		11.63	□□□□□ -0.55
SCRN1-208	ENST00000438497	TMX4	Q9H1E5	349 aa	Predicted RBP	11.63	□□□□□ -0.55
SCRN1-208	ENST00000438497	COL4A5	P29400	1685 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	BCOR	Q6W2J9	1755 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	NBPF26	B4DH59	902 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	U2SURP	O15042	1029 aa	Known RBP	11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	ZBTB22	O15209	634 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	PPIP5K2	O43314	1243 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	HUNK	P57058	714 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	CRY2	Q49AN0	593 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	NBPF10	Q6P3W6	841 aa	Known RBP	11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	NUTM1	Q86Y26	1132 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	NBPF15	Q8N660	670 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	RBM17	Q96I25	401 aa	Known RBP	11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	BCL2L13	Q9BXK5	485 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	VPS33B	Q9H267	617 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	ZNRF3	Q9ULT6	936 aa		11.62	□□□□□ -0.55
SCRN1-208	ENST00000438497	TRPA1	O75762	1119 aa		11.61	□□□□□ -0.55
SCRN1-208	ENST00000438497	GMPS	P49915	693 aa	Predicted RBP	11.61	□□□□□ -0.55
SCRN1-208	ENST00000438497	HIRA	P54198	1017 aa	Predicted RBP	11.61	□□□□□ -0.55
SCRN1-208	ENST00000438497	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
SCRN1-208	ENST00000438497	USP48	Q86UV5	1035 aa		11.61	□□□□□ -0.55
SCRN1-208	ENST00000438497	CRAMP1	Q96RY5	1269 aa		11.61	□□□□□ -0.55
SCRN1-208	ENST00000438497	TIMELESS	Q9UNS1	1208 aa		11.61	□□□□□ -0.55
SCRN1-208	ENST00000438497	NPC1L1	Q9UHC9	1359 aa		11.61	□□□□□ -0.55
SCRN1-208	ENST00000438497	SNED1	Q8TER0	1413 aa		11.6	□□□□□ -0.55
SCRN1-208	ENST00000438497	HSPA5	P11021	654 aa	Known RBP	11.6	□□□□□ -0.55
SCRN1-208	ENST00000438497	KIF23	Q02241	960 aa	Predicted RBP	11.6	□□□□□ -0.55
SCRN1-208	ENST00000438497	TNIP1	Q15025	636 aa		11.6	□□□□□ -0.55
SCRN1-208	ENST00000438497	AOC3	Q16853	763 aa		11.6	□□□□□ -0.55
SCRN1-208	ENST00000438497	RGMB	Q6NW40	437 aa		11.6	□□□□□ -0.55
SCRN1-208	ENST00000438497	NGEF	Q8N5V2	710 aa		11.6	□□□□□ -0.55
SCRN1-208	ENST00000438497	CNOT7	Q9UIV1	285 aa	Known RBP	11.6	□□□□□ -0.55
SCRN1-208	ENST00000438497	SIPA1L3	O60292	1781 aa	Predicted RBP	11.59	□□□□□ -0.55
SCRN1-208	ENST00000438497	PPEF1	O14829	653 aa	Predicted RBP	11.59	□□□□□ -0.55
SCRN1-208	ENST00000438497	C2orf69	Q8N8R5	385 aa		11.59	□□□□□ -0.55
SCRN1-208	ENST00000438497	SUPT20H	Q8NEM7	779 aa		11.59	□□□□□ -0.55
SCRN1-208	ENST00000438497	CCDC102A	Q96A19	550 aa		11.59	□□□□□ -0.55
SCRN1-208	ENST00000438497	RNF186	Q9NXI6	227 aa		11.59	□□□□□ -0.55
SCRN1-208	ENST00000438497	SAGE1	Q9NXZ1	904 aa		11.59	□□□□□ -0.55
SCRN1-208	ENST00000438497	CEMIP	Q8WUJ3	1361 aa		11.58	□□□□□ -0.56
SCRN1-208	ENST00000438497		H7C1D1	291 aa		11.58	□□□□□ -0.56
SCRN1-208	ENST00000438497	RAD17	O75943	681 aa		11.58	□□□□□ -0.56
SCRN1-208	ENST00000438497	DLK2	Q6UY11	383 aa		11.58	□□□□□ -0.56
SCRN1-208	ENST00000438497	PHACTR3	Q96KR7	559 aa		11.58	□□□□□ -0.56
SCRN1-208	ENST00000438497	KIF7	Q2M1P5	1343 aa		11.58	□□□□□ -0.56
SCRN1-208	ENST00000438497	FAM155A	B1AL88	458 aa	Predicted RBP	11.57	□□□□□ -0.56
SCRN1-208	ENST00000438497	ERVV-1	B6SEH8	477 aa		11.57	□□□□□ -0.56
SCRN1-208	ENST00000438497	ZNF157	P51786	506 aa	Predicted RBP	11.57	□□□□□ -0.56
SCRN1-208	ENST00000438497	SUSD4	Q5VX71	490 aa		11.57	□□□□□ -0.56
SCRN1-208	ENST00000438497	CTU1	Q7Z7A3	348 aa	Known RBP	11.57	□□□□□ -0.56
SCRN1-208	ENST00000438497	SLC51A	Q86UW1	340 aa		11.57	□□□□□ -0.56
SCRN1-208	ENST00000438497	RTF1	Q92541	710 aa	Known RBP	11.57	□□□□□ -0.56
SCRN1-208	ENST00000438497	NLRP3	Q96P20	1036 aa		11.57	□□□□□ -0.56
SCRN1-208	ENST00000438497	ATP6V0A2	Q9Y487	856 aa		11.57	□□□□□ -0.56
SCRN1-208	ENST00000438497	AKAP11	Q9UKA4	1901 aa		11.56	□□□□□ -0.56
SCRN1-208	ENST00000438497	POLR2A	P24928	1970 aa	Known RBP	11.56	□□□□□ -0.56
SCRN1-208	ENST00000438497	GPT	P24298	496 aa		11.56	□□□□□ -0.56
SCRN1-208	ENST00000438497	CC2D1B	Q5T0F9	858 aa	Known RBP	11.56	□□□□□ -0.56
SCRN1-208	ENST00000438497	TRPM4	Q8TD43	1214 aa		11.56	□□□□□ -0.56
SCRN1-208	ENST00000438497	GCC1	Q96CN9	775 aa		11.56	□□□□□ -0.56
SCRN1-208	ENST00000438497	CSRNP1	Q96S65	589 aa		11.56	□□□□□ -0.56
SCRN1-208	ENST00000438497	GBA2	Q9HCG7	927 aa	Predicted RBP	11.56	□□□□□ -0.56
SCRN1-208	ENST00000438497	RRP7A	Q9Y3A4	280 aa	Known RBP	11.56	□□□□□ -0.56
SCRN1-208	ENST00000438497	ABCC12	Q96J65	1359 aa		11.55	□□□□□ -0.56
SCRN1-208	ENST00000438497	BBOX1	O75936	387 aa		11.55	□□□□□ -0.56
SCRN1-208	ENST00000438497	DPP8	Q6V1X1	898 aa	Predicted RBP	11.55	□□□□□ -0.56
SCRN1-208	ENST00000438497	MCM10	Q7L590	875 aa		11.55	□□□□□ -0.56
SCRN1-208	ENST00000438497	SP8	Q8IXZ3	490 aa		11.55	□□□□□ -0.56
SCRN1-208	ENST00000438497	MPND	Q8N594	471 aa		11.55	□□□□□ -0.56
SCRN1-208	ENST00000438497	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.55	□□□□□ -0.56
SCRN1-208	ENST00000438497	NUP98	P52948	1817 aa		11.55	□□□□□ -0.56
SCRN1-208	ENST00000438497	CDHR2	Q9BYE9	1310 aa		11.55	□□□□□ -0.56
SCRN1-208	ENST00000438497	SHTN1	A0MZ66	631 aa		11.54	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms