RNA–Protein interactions for RNA: ENST00000438347.1

CCND3P1-201, Transcript of cyclin D3 pseudogene 1, humanhuman

BASIC

Gene CCND3P1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3P1-201ENST00000438347 NFKBIEO00221 500 aa17.02■□□□□ 0.32
CCND3P1-201ENST00000438347 C21orf2O43822 256 aa17.02■□□□□ 0.32
CCND3P1-201ENST00000438347 HOXA10P31260 410 aaPredicted RBP17.02■□□□□ 0.32
CCND3P1-201ENST00000438347 TRIM28Q13263 835 aaKnown RBP17.02■□□□□ 0.32
CCND3P1-201ENST00000438347 C9orf131Q5VYM1 1079 aa17.02■□□□□ 0.32
CCND3P1-201ENST00000438347 NUP98P52948 1817 aa17.02■□□□□ 0.31
CCND3P1-201ENST00000438347 COL11A2P13942 1736 aaPredicted RBP17.01■□□□□ 0.31
CCND3P1-201ENST00000438347 PRELPP51888 382 aa17.01■□□□□ 0.31
CCND3P1-201ENST00000438347 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
CCND3P1-201ENST00000438347 ALDH1B1P30837 517 aa17■□□□□ 0.31
CCND3P1-201ENST00000438347 RASSF7Q02833 373 aa17■□□□□ 0.31
CCND3P1-201ENST00000438347 C3orf67Q6ZVT6 689 aa17■□□□□ 0.31
CCND3P1-201ENST00000438347 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
CCND3P1-201ENST00000438347 ZC3H4Q9UPT8 1303 aaKnown RBP16.99■□□□□ 0.31
CCND3P1-201ENST00000438347 VAMP4O75379 141 aa16.99■□□□□ 0.31
CCND3P1-201ENST00000438347 LMNB1P20700 586 aa16.99■□□□□ 0.31
CCND3P1-201ENST00000438347 EXOSC9Q06265 439 aaKnown RBP16.99■□□□□ 0.31
CCND3P1-201ENST00000438347 SOGA3Q5TF21 947 aa16.99■□□□□ 0.31
CCND3P1-201ENST00000438347 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
CCND3P1-201ENST00000438347 SYNE4Q8N205 404 aa16.99■□□□□ 0.31
CCND3P1-201ENST00000438347 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
CCND3P1-201ENST00000438347 ZNF219Q9P2Y4 722 aaPredicted RBP16.99■□□□□ 0.31
CCND3P1-201ENST00000438347 TRMT112Q9UI30 125 aaKnown RBP16.99■□□□□ 0.31
CCND3P1-201ENST00000438347 LTBP3Q9NS15 1303 aa16.98■□□□□ 0.31
CCND3P1-201ENST00000438347 ATP5J2-PTCD1G3V325 749 aa16.98■□□□□ 0.31
CCND3P1-201ENST00000438347 NLRP3Q96P20 1036 aa16.98■□□□□ 0.31
CCND3P1-201ENST00000438347 CRAMP1Q96RY5 1269 aa16.98■□□□□ 0.31
CCND3P1-201ENST00000438347 STK31Q9BXU1 1019 aa16.98■□□□□ 0.31
CCND3P1-201ENST00000438347 SH3TC1Q8TE82 1336 aa16.97■□□□□ 0.31
CCND3P1-201ENST00000438347 TCERG1O14776 1098 aaKnown RBP16.97■□□□□ 0.31
CCND3P1-201ENST00000438347 DDX58O95786 925 aaKnown RBP16.97■□□□□ 0.31
CCND3P1-201ENST00000438347 TNRC6CQ9HCJ0 1690 aaKnown RBP16.97■□□□□ 0.31
CCND3P1-201ENST00000438347 TOMM70O94826 608 aa16.96■□□□□ 0.31
CCND3P1-201ENST00000438347 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
CCND3P1-201ENST00000438347 HCLS1P14317 486 aaPredicted RBP16.96■□□□□ 0.31
CCND3P1-201ENST00000438347 HSPA6P17066 643 aa16.96■□□□□ 0.31
CCND3P1-201ENST00000438347 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.31
CCND3P1-201ENST00000438347 KSR2Q6VAB6 950 aa16.96■□□□□ 0.31
CCND3P1-201ENST00000438347 G2E3Q7L622 706 aa16.96■□□□□ 0.31
CCND3P1-201ENST00000438347 RPGRQ92834 1020 aaKnown RBP16.96■□□□□ 0.31
CCND3P1-201ENST00000438347 METTL22Q9BUU2 404 aaPredicted RBP16.96■□□□□ 0.31
CCND3P1-201ENST00000438347 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.3
CCND3P1-201ENST00000438347 CCDC93Q567U6 631 aa16.95■□□□□ 0.3
CCND3P1-201ENST00000438347 ZNF526Q8TF50 670 aaPredicted RBP16.95■□□□□ 0.3
CCND3P1-201ENST00000438347 RBM17Q96I25 401 aaKnown RBP16.95■□□□□ 0.3
CCND3P1-201ENST00000438347 TAOK3Q9H2K8 898 aa16.95■□□□□ 0.3
CCND3P1-201ENST00000438347 SLX4Q8IY92 1834 aa16.95■□□□□ 0.3
CCND3P1-201ENST00000438347 PI4KAP2A4QPH2 592 aa16.94■□□□□ 0.3
CCND3P1-201ENST00000438347 OLFM4Q6UX06 510 aa16.94■□□□□ 0.3
CCND3P1-201ENST00000438347 PI4KAP1Q8N8J0 262 aa16.94■□□□□ 0.3
CCND3P1-201ENST00000438347 CCDC191Q8NCU4 936 aa16.94■□□□□ 0.3
CCND3P1-201ENST00000438347 ZNF428Q96B54 188 aa16.94■□□□□ 0.3
CCND3P1-201ENST00000438347 FAM89AQ96GI7 184 aa16.94■□□□□ 0.3
CCND3P1-201ENST00000438347 MYD88Q99836 296 aa16.94■□□□□ 0.3
CCND3P1-201ENST00000438347 MAP3K2Q9Y2U5 619 aa16.94■□□□□ 0.3
CCND3P1-201ENST00000438347 CC2D2BQ6DHV5 1058 aa16.93■□□□□ 0.3
CCND3P1-201ENST00000438347 RTKN2Q8IZC4 609 aa16.93■□□□□ 0.3
CCND3P1-201ENST00000438347 ZBTB38Q8NAP3 1195 aaPredicted RBP16.93■□□□□ 0.3
CCND3P1-201ENST00000438347 SNED1Q8TER0 1413 aa16.93■□□□□ 0.3
CCND3P1-201ENST00000438347 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
CCND3P1-201ENST00000438347 E9PSI1 815 aa16.92■□□□□ 0.3
CCND3P1-201ENST00000438347 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCND3P1-201ENST00000438347 FLIIQ13045 1269 aa16.92■□□□□ 0.3
CCND3P1-201ENST00000438347 C16orf71Q8IYS4 520 aaPredicted RBP16.92■□□□□ 0.3
CCND3P1-201ENST00000438347 MIER1Q8N108 512 aa16.92■□□□□ 0.3
CCND3P1-201ENST00000438347 IGKV5-2P06315 115 aa16.91■□□□□ 0.3
CCND3P1-201ENST00000438347 APLP1P51693 650 aa16.91■□□□□ 0.3
CCND3P1-201ENST00000438347 SLFN5Q08AF3 891 aa16.91■□□□□ 0.3
CCND3P1-201ENST00000438347 SF3B3Q15393 1217 aaKnown RBP16.91■□□□□ 0.3
CCND3P1-201ENST00000438347 CWC25Q9NXE8 425 aaPredicted RBP16.91■□□□□ 0.3
CCND3P1-201ENST00000438347 ABCC4O15439 1325 aa16.91■□□□□ 0.3
CCND3P1-201ENST00000438347 ARFGEF2Q9Y6D5 1785 aa16.9■□□□□ 0.3
CCND3P1-201ENST00000438347 IRS4O14654 1257 aaPredicted RBP16.9■□□□□ 0.3
CCND3P1-201ENST00000438347 KIF3CO14782 793 aa16.9■□□□□ 0.3
CCND3P1-201ENST00000438347 PPEF1O14829 653 aaPredicted RBP16.9■□□□□ 0.3
CCND3P1-201ENST00000438347 BBOX1O75936 387 aa16.9■□□□□ 0.3
CCND3P1-201ENST00000438347 PCCAP05165 728 aaPredicted RBP16.9■□□□□ 0.3
CCND3P1-201ENST00000438347 GRIPAP1Q4V328 841 aa16.9■□□□□ 0.3
CCND3P1-201ENST00000438347 PSMD1Q99460 953 aa16.9■□□□□ 0.3
CCND3P1-201ENST00000438347 FSTL1Q12841 308 aa16.89■□□□□ 0.29
CCND3P1-201ENST00000438347 RTL5Q5HYW3 569 aaPredicted RBP16.89■□□□□ 0.29
CCND3P1-201ENST00000438347 DDX46Q7L014 1031 aaKnown RBP16.89■□□□□ 0.29
CCND3P1-201ENST00000438347 SLC51AQ86UW1 340 aa16.89■□□□□ 0.29
CCND3P1-201ENST00000438347 TRMT2AQ8IZ69 625 aaKnown RBP16.89■□□□□ 0.29
CCND3P1-201ENST00000438347 RBM46Q8TBY0 533 aaKnown RBP16.89■□□□□ 0.29
CCND3P1-201ENST00000438347 ATP6V0A2Q9Y487 856 aa16.89■□□□□ 0.29
CCND3P1-201ENST00000438347 FER1L6Q2WGJ9 1857 aa16.88■□□□□ 0.29
CCND3P1-201ENST00000438347 GLTPD2A6NH11 291 aa16.88■□□□□ 0.29
CCND3P1-201ENST00000438347 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
CCND3P1-201ENST00000438347 HSP90B1P14625 803 aaKnown RBP16.88■□□□□ 0.29
CCND3P1-201ENST00000438347 NEXNQ0ZGT2 675 aa16.88■□□□□ 0.29
CCND3P1-201ENST00000438347 FKBP5Q13451 457 aaPredicted RBP16.88■□□□□ 0.29
CCND3P1-201ENST00000438347 CDCA7LQ96GN5 454 aa16.88■□□□□ 0.29
CCND3P1-201ENST00000438347 NMRK2Q9NPI5 230 aa16.88■□□□□ 0.29
CCND3P1-201ENST00000438347 SBF1O95248 1867 aa16.87■□□□□ 0.29
CCND3P1-201ENST00000438347 GRAPQ13588 217 aa16.87■□□□□ 0.29
CCND3P1-201ENST00000438347 CWF19L2Q2TBE0 894 aaKnown RBP16.87■□□□□ 0.29
CCND3P1-201ENST00000438347 SP8Q8IXZ3 490 aa16.87■□□□□ 0.29
CCND3P1-201ENST00000438347 GRAPLQ8TC17 118 aaPredicted RBP16.87■□□□□ 0.29
CCND3P1-201ENST00000438347 DNAAF4Q8WXU2 420 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms