RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 KCNQ4P56696 695 aa11.9□□□□□ -0.5
NIF3L1-208ENST00000436412 SPRYD7Q5W111 196 aa11.9□□□□□ -0.5
NIF3L1-208ENST00000436412 BRICD5Q6PL45 260 aa11.9□□□□□ -0.5
NIF3L1-208ENST00000436412 COL23A1Q86Y22 540 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-208ENST00000436412 TMC1Q8TDI8 760 aa11.9□□□□□ -0.5
NIF3L1-208ENST00000436412 PUS7Q96PZ0 661 aaKnown RBP11.9□□□□□ -0.5
NIF3L1-208ENST00000436412 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
NIF3L1-208ENST00000436412 NSD2O96028 1365 aa11.9□□□□□ -0.5
NIF3L1-208ENST00000436412 USP47Q96K76 1375 aa11.9□□□□□ -0.5
NIF3L1-208ENST00000436412 CGNL1Q0VF96 1302 aa11.89□□□□□ -0.51
NIF3L1-208ENST00000436412 ZMYND10O75800 440 aa11.88□□□□□ -0.51
NIF3L1-208ENST00000436412 RNF19BQ6ZMZ0 732 aa11.88□□□□□ -0.51
NIF3L1-208ENST00000436412 LTV1Q96GA3 475 aaPredicted RBP11.88□□□□□ -0.51
NIF3L1-208ENST00000436412 REPIN1Q9BWE0 567 aaKnown RBP11.88□□□□□ -0.51
NIF3L1-208ENST00000436412 SLC12A5Q9H2X9 1139 aa11.88□□□□□ -0.51
NIF3L1-208ENST00000436412 PDZRN3Q9UPQ7 1066 aa11.88□□□□□ -0.51
NIF3L1-208ENST00000436412 ADCY9O60503 1353 aa11.88□□□□□ -0.51
NIF3L1-208ENST00000436412 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-208ENST00000436412 ZC3H15Q8WU90 426 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-208ENST00000436412 DOT1LQ8TEK3 1739 aa11.86□□□□□ -0.51
NIF3L1-208ENST00000436412 HOXC9P31274 260 aa11.86□□□□□ -0.51
NIF3L1-208ENST00000436412 AMPHP49418 695 aa11.86□□□□□ -0.51
NIF3L1-208ENST00000436412 ZNF598Q86UK7 904 aaKnown RBP11.86□□□□□ -0.51
NIF3L1-208ENST00000436412 COG3Q96JB2 828 aa11.86□□□□□ -0.51
NIF3L1-208ENST00000436412 GPCPD1Q9NPB8 672 aa11.86□□□□□ -0.51
NIF3L1-208ENST00000436412 PRDM9Q9NQV7 894 aa11.86□□□□□ -0.51
NIF3L1-208ENST00000436412 FAM217BQ9NTX9 383 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-208ENST00000436412 A0A1W2PP64 1363 aa11.86□□□□□ -0.51
NIF3L1-208ENST00000436412 KDM4AO75164 1064 aa11.85□□□□□ -0.51
NIF3L1-208ENST00000436412 MSL1Q68DK7 614 aa11.85□□□□□ -0.51
NIF3L1-208ENST00000436412 HLA-CQ95604 372 aa11.85□□□□□ -0.51
NIF3L1-208ENST00000436412 MAP3K19Q56UN5 1328 aa11.85□□□□□ -0.51
NIF3L1-208ENST00000436412 CARD11Q9BXL7 1154 aa11.84□□□□□ -0.51
NIF3L1-208ENST00000436412 RTL1A6NKG5 1358 aa11.83□□□□□ -0.52
NIF3L1-208ENST00000436412 MEGF6O75095 1541 aa11.83□□□□□ -0.52
NIF3L1-208ENST00000436412 CLCN1P35523 988 aa11.83□□□□□ -0.52
NIF3L1-208ENST00000436412 GRIPAP1Q4V328 841 aa11.83□□□□□ -0.52
NIF3L1-208ENST00000436412 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.52
NIF3L1-208ENST00000436412 PCNTO95613 3336 aa11.83□□□□□ -0.52
NIF3L1-208ENST00000436412 NSD3Q9BZ95 1437 aa11.83□□□□□ -0.52
NIF3L1-208ENST00000436412 C5P01031 1676 aa11.82□□□□□ -0.52
NIF3L1-208ENST00000436412 SLC24A1O60721 1099 aa11.82□□□□□ -0.52
NIF3L1-208ENST00000436412 MSS51Q4VC12 460 aa11.82□□□□□ -0.52
NIF3L1-208ENST00000436412 NBPF6Q5VWK0 638 aa11.82□□□□□ -0.52
NIF3L1-208ENST00000436412 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
NIF3L1-208ENST00000436412 ZNF526Q8TF50 670 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-208ENST00000436412 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-208ENST00000436412 NBPF4Q96M43 638 aa11.82□□□□□ -0.52
NIF3L1-208ENST00000436412 SIN3AQ96ST3 1273 aa11.82□□□□□ -0.52
NIF3L1-208ENST00000436412 PCDH11XQ9BZA7 1347 aa11.82□□□□□ -0.52
NIF3L1-208ENST00000436412 PCDH11YQ9BZA8 1340 aa11.82□□□□□ -0.52
NIF3L1-208ENST00000436412 PALLDQ8WX93 1383 aa11.81□□□□□ -0.52
NIF3L1-208ENST00000436412 TATP17735 454 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-208ENST00000436412 NEUROD1Q13562 356 aa11.81□□□□□ -0.52
NIF3L1-208ENST00000436412 ZNF697Q5TEC3 545 aa11.81□□□□□ -0.52
NIF3L1-208ENST00000436412 AK7Q96M32 723 aa11.81□□□□□ -0.52
NIF3L1-208ENST00000436412 FCF1Q9Y324 198 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-208ENST00000436412 IGSF1Q8N6C5 1336 aa11.81□□□□□ -0.52
NIF3L1-208ENST00000436412 TAF1LQ8IZX4 1826 aa11.81□□□□□ -0.52
NIF3L1-208ENST00000436412 SMG6Q86US8 1419 aaKnown RBP11.8□□□□□ -0.52
NIF3L1-208ENST00000436412 HOXA2O43364 376 aa11.8□□□□□ -0.52
NIF3L1-208ENST00000436412 GDF9O60383 454 aa11.8□□□□□ -0.52
NIF3L1-208ENST00000436412 RGPD2P0DJD1 1756 aa11.79□□□□□ -0.52
NIF3L1-208ENST00000436412 SSFA2P28290 1259 aa11.79□□□□□ -0.52
NIF3L1-208ENST00000436412 USP46P62068 366 aa11.79□□□□□ -0.52
NIF3L1-208ENST00000436412 PRR20EP86478 221 aa11.79□□□□□ -0.52
NIF3L1-208ENST00000436412 PRR20CP86479 221 aa11.79□□□□□ -0.52
NIF3L1-208ENST00000436412 PRR20DP86480 221 aa11.79□□□□□ -0.52
NIF3L1-208ENST00000436412 PRR20BP86481 221 aa11.79□□□□□ -0.52
NIF3L1-208ENST00000436412 PRR20AP86496 221 aa11.79□□□□□ -0.52
NIF3L1-208ENST00000436412 MPRIPQ6WCQ1 1025 aa11.79□□□□□ -0.52
NIF3L1-208ENST00000436412 TOMM70O94826 608 aa11.78□□□□□ -0.52
NIF3L1-208ENST00000436412 KRI1Q8N9T8 703 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-208ENST00000436412 C4BP0C0L5 1744 aa11.77□□□□□ -0.52
NIF3L1-208ENST00000436412 FBLN1P23142 703 aa11.77□□□□□ -0.53
NIF3L1-208ENST00000436412 GUCA2AQ02747 115 aa11.77□□□□□ -0.53
NIF3L1-208ENST00000436412 AMHR2Q16671 573 aa11.77□□□□□ -0.53
NIF3L1-208ENST00000436412 Q3C1V9 767 aa11.77□□□□□ -0.53
NIF3L1-208ENST00000436412 USHBP1Q8N6Y0 703 aa11.77□□□□□ -0.53
NIF3L1-208ENST00000436412 KIF24Q5T7B8 1368 aa11.77□□□□□ -0.53
NIF3L1-208ENST00000436412 UBR3Q6ZT12 1888 aa11.76□□□□□ -0.53
NIF3L1-208ENST00000436412 CYP27B1O15528 508 aa11.76□□□□□ -0.53
NIF3L1-208ENST00000436412 RPIAP49247 311 aa11.76□□□□□ -0.53
NIF3L1-208ENST00000436412 MMP16P51512 607 aa11.76□□□□□ -0.53
NIF3L1-208ENST00000436412 RRS1Q15050 365 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-208ENST00000436412 DNAJC5GQ8N7S2 189 aa11.76□□□□□ -0.53
NIF3L1-208ENST00000436412 INSRP06213 1382 aa11.76□□□□□ -0.53
NIF3L1-208ENST00000436412 CICQ96RK0 1608 aaPredicted RBP11.75□□□□□ -0.53
NIF3L1-208ENST00000436412 FYB1O15117 783 aa11.75□□□□□ -0.53
NIF3L1-208ENST00000436412 TGFB2P61812 414 aa11.75□□□□□ -0.53
NIF3L1-208ENST00000436412 AMIGO3Q86WK7 504 aa11.75□□□□□ -0.53
NIF3L1-208ENST00000436412 PIGBQ92521 554 aa11.75□□□□□ -0.53
NIF3L1-208ENST00000436412 PKD2L1Q9P0L9 805 aa11.75□□□□□ -0.53
NIF3L1-208ENST00000436412 LOC102724428A0A0B4J2F2 783 aa11.74□□□□□ -0.53
NIF3L1-208ENST00000436412 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-208ENST00000436412 SIK1P57059 783 aa11.74□□□□□ -0.53
NIF3L1-208ENST00000436412 TESK2Q96S53 571 aa11.74□□□□□ -0.53
NIF3L1-208ENST00000436412 USB1Q9BQ65 265 aaKnown RBP11.74□□□□□ -0.53
NIF3L1-208ENST00000436412 FLT4P35916 1363 aa11.74□□□□□ -0.53
NIF3L1-208ENST00000436412 ITGB4P16144 1822 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms