RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 DGKZQ13574 1117 aa20.15■□□□□ 0.82
NELFE-204ENST00000436289 TMX4Q9H1E5 349 aaPredicted RBP20.15■□□□□ 0.82
NELFE-204ENST00000436289 SNED1Q8TER0 1413 aa20.14■□□□□ 0.81
NELFE-204ENST00000436289 TRAF5O00463 557 aa20.14■□□□□ 0.81
NELFE-204ENST00000436289 NIM1KQ8IY84 436 aa20.14■□□□□ 0.81
NELFE-204ENST00000436289 ZC3H15Q8WU90 426 aaKnown RBP20.14■□□□□ 0.81
NELFE-204ENST00000436289 TSKSQ9UJT2 592 aa20.14■□□□□ 0.81
NELFE-204ENST00000436289 TRPM7Q96QT4 1865 aa20.13■□□□□ 0.81
NELFE-204ENST00000436289 KIF7Q2M1P5 1343 aa20.13■□□□□ 0.81
NELFE-204ENST00000436289 CELF2O95319 508 aaKnown RBP20.13■□□□□ 0.81
NELFE-204ENST00000436289 FMR1Q06787 632 aaKnown RBP eCLIP20.13■□□□□ 0.81
NELFE-204ENST00000436289 RPGRQ92834 1020 aaKnown RBP20.13■□□□□ 0.81
NELFE-204ENST00000436289 GPRC5DQ9NZD1 345 aa20.13■□□□□ 0.81
NELFE-204ENST00000436289 PGAP2Q9UHJ9 254 aa20.13■□□□□ 0.81
NELFE-204ENST00000436289 CLSPNQ9HAW4 1339 aa20.12■□□□□ 0.81
NELFE-204ENST00000436289 FAM177BA6PVY3 158 aa20.12■□□□□ 0.81
NELFE-204ENST00000436289 U2SURPO15042 1029 aaKnown RBP20.12■□□□□ 0.81
NELFE-204ENST00000436289 KCNQ3O43525 872 aa20.12■□□□□ 0.81
NELFE-204ENST00000436289 NOGQ13253 232 aa20.12■□□□□ 0.81
NELFE-204ENST00000436289 CRAMP1Q96RY5 1269 aa20.12■□□□□ 0.81
NELFE-204ENST00000436289 PIP4K2AP48426 406 aaPredicted RBP20.11■□□□□ 0.81
NELFE-204ENST00000436289 RBM17Q96I25 401 aaKnown RBP20.11■□□□□ 0.81
NELFE-204ENST00000436289 SIPA1L3O60292 1781 aaPredicted RBP20.11■□□□□ 0.81
NELFE-204ENST00000436289 ERVV-1B6SEH8 477 aa20.1■□□□□ 0.81
NELFE-204ENST00000436289 CDHR2Q9BYE9 1310 aa20.09■□□□□ 0.81
NELFE-204ENST00000436289 NBPF26B4DH59 902 aa20.09■□□□□ 0.81
NELFE-204ENST00000436289 NBPF10Q6P3W6 841 aaKnown RBP20.09■□□□□ 0.81
NELFE-204ENST00000436289 CDC37L1Q7L3B6 337 aa20.09■□□□□ 0.81
NELFE-204ENST00000436289 NBPF15Q8N660 670 aa20.09■□□□□ 0.81
NELFE-204ENST00000436289 SUPT20HQ8NEM7 779 aa20.09■□□□□ 0.81
NELFE-204ENST00000436289 RTF1Q92541 710 aaKnown RBP20.09■□□□□ 0.81
NELFE-204ENST00000436289 HLFQ16534 295 aa20.08■□□□□ 0.81
NELFE-204ENST00000436289 CIAPIN1Q6FI81 312 aa20.08■□□□□ 0.81
NELFE-204ENST00000436289 ZNRF3Q9ULT6 936 aa20.08■□□□□ 0.81
NELFE-204ENST00000436289 CASP8AP2Q9UKL3 1982 aa20.08■□□□□ 0.8
NELFE-204ENST00000436289 LTBP1Q14766 1721 aa20.07■□□□□ 0.8
NELFE-204ENST00000436289 PPIP5K2O43314 1243 aa20.07■□□□□ 0.8
NELFE-204ENST00000436289 SAGE1Q9NXZ1 904 aa20.07■□□□□ 0.8
NELFE-204ENST00000436289 RIC1Q4ADV7 1423 aa20.07■□□□□ 0.8
NELFE-204ENST00000436289 PRAMEF22A3QJZ6 481 aa20.06■□□□□ 0.8
NELFE-204ENST00000436289 PPEF1O14829 653 aaPredicted RBP20.06■□□□□ 0.8
NELFE-204ENST00000436289 IBTKQ9P2D0 1353 aaPredicted RBP20.06■□□□□ 0.8
NELFE-204ENST00000436289 HTATSF1O43719 755 aaKnown RBP20.05■□□□□ 0.8
NELFE-204ENST00000436289 CXCL9Q07325 125 aa20.05■□□□□ 0.8
NELFE-204ENST00000436289 TNIP1Q15025 636 aa20.05■□□□□ 0.8
NELFE-204ENST00000436289 NUTM1Q86Y26 1132 aa20.05■□□□□ 0.8
NELFE-204ENST00000436289 GLIS2Q9BZE0 524 aaPredicted RBP20.05■□□□□ 0.8
NELFE-204ENST00000436289 TNRC18O15417 2968 aaPredicted RBP20.05■□□□□ 0.8
NELFE-204ENST00000436289 NPC1L1Q9UHC9 1359 aa20.05■□□□□ 0.8
NELFE-204ENST00000436289 COL4A5P29400 1685 aa20.04■□□□□ 0.8
NELFE-204ENST00000436289 PER1O15534 1290 aaPredicted RBP20.04■□□□□ 0.8
NELFE-204ENST00000436289 PRPF38BQ5VTL8 546 aaKnown RBP20.04■□□□□ 0.8
NELFE-204ENST00000436289 CCDC102AQ96A19 550 aa20.03■□□□□ 0.8
NELFE-204ENST00000436289 PHACTR3Q96KR7 559 aa20.03■□□□□ 0.8
NELFE-204ENST00000436289 RTFDC1Q9BY42 306 aaPredicted RBP20.03■□□□□ 0.8
NELFE-204ENST00000436289 ATP6V0A2Q9Y487 856 aa20.03■□□□□ 0.8
NELFE-204ENST00000436289 PRKAR2BP31323 418 aa20.02■□□□□ 0.8
NELFE-204ENST00000436289 GMPSP49915 693 aaPredicted RBP20.02■□□□□ 0.8
NELFE-204ENST00000436289 AOC3Q16853 763 aa20.02■□□□□ 0.8
NELFE-204ENST00000436289 CC2D1BQ5T0F9 858 aaKnown RBP20.02■□□□□ 0.8
NELFE-204ENST00000436289 KIF6Q6ZMV9 814 aa20.02■□□□□ 0.8
NELFE-204ENST00000436289 NLRP3Q96P20 1036 aa20.02■□□□□ 0.8
NELFE-204ENST00000436289 BCL2L13Q9BXK5 485 aa20.02■□□□□ 0.8
NELFE-204ENST00000436289 ZNF408Q9H9D4 720 aa20.02■□□□□ 0.8
NELFE-204ENST00000436289 MAP3K15Q6ZN16 1313 aa20.02■□□□□ 0.79
NELFE-204ENST00000436289 ABCC12Q96J65 1359 aa20.01■□□□□ 0.79
NELFE-204ENST00000436289 H7C1D1 291 aa20.01■□□□□ 0.79
NELFE-204ENST00000436289 HUNKP57058 714 aa20.01■□□□□ 0.79
NELFE-204ENST00000436289 PPP1R42Q7Z4L9 355 aa20.01■□□□□ 0.79
NELFE-204ENST00000436289 NUDCQ9Y266 331 aa20.01■□□□□ 0.79
NELFE-204ENST00000436289 BBOX1O75936 387 aa20■□□□□ 0.79
NELFE-204ENST00000436289 TAF7Q15545 349 aaPredicted RBP20■□□□□ 0.79
NELFE-204ENST00000436289 REM2Q8IYK8 340 aaPredicted RBP20■□□□□ 0.79
NELFE-204ENST00000436289 CFAP53Q96M91 514 aa20■□□□□ 0.79
NELFE-204ENST00000436289 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
NELFE-204ENST00000436289 COL3A1P02461 1466 aaPredicted RBP19.99■□□□□ 0.79
NELFE-204ENST00000436289 RGMBQ6NW40 437 aa19.99■□□□□ 0.79
NELFE-204ENST00000436289 TCERG1O14776 1098 aaKnown RBP19.98■□□□□ 0.79
NELFE-204ENST00000436289 HIRAP54198 1017 aaPredicted RBP19.98■□□□□ 0.79
NELFE-204ENST00000436289 KIAA2012Q0VF49 1180 aa19.98■□□□□ 0.79
NELFE-204ENST00000436289 PARP10Q53GL7 1025 aa19.98■□□□□ 0.79
NELFE-204ENST00000436289 SUSD4Q5VX71 490 aa19.98■□□□□ 0.79
NELFE-204ENST00000436289 MCM10Q7L590 875 aa19.98■□□□□ 0.79
NELFE-204ENST00000436289 C2orf69Q8N8R5 385 aa19.98■□□□□ 0.79
NELFE-204ENST00000436289 PNISRQ8TF01 805 aaKnown RBP19.98■□□□□ 0.79
NELFE-204ENST00000436289 CNOT7Q9UIV1 285 aaKnown RBP19.98■□□□□ 0.79
NELFE-204ENST00000436289 SLC10A5Q5PT55 438 aa19.97■□□□□ 0.79
NELFE-204ENST00000436289 DPP8Q6V1X1 898 aaPredicted RBP19.97■□□□□ 0.79
NELFE-204ENST00000436289 SP8Q8IXZ3 490 aa19.97■□□□□ 0.79
NELFE-204ENST00000436289 ZNF34Q8IZ26 560 aa19.97■□□□□ 0.79
NELFE-204ENST00000436289 DPF2Q92785 391 aa19.97■□□□□ 0.79
NELFE-204ENST00000436289 USP48Q86UV5 1035 aa19.96■□□□□ 0.79
NELFE-204ENST00000436289 MPNDQ8N594 471 aa19.96■□□□□ 0.79
NELFE-204ENST00000436289 NGEFQ8N5V2 710 aa19.96■□□□□ 0.79
NELFE-204ENST00000436289 GPTP24298 496 aa19.95■□□□□ 0.78
NELFE-204ENST00000436289 SOX10P56693 466 aa19.95■□□□□ 0.78
NELFE-204ENST00000436289 TRIM26Q12899 539 aaPredicted RBP19.95■□□□□ 0.78
NELFE-204ENST00000436289 PKN2Q16513 984 aaKnown RBP19.95■□□□□ 0.78
NELFE-204ENST00000436289 GIGYF2Q6Y7W6 1299 aaKnown RBP19.95■□□□□ 0.78
NELFE-204ENST00000436289 CTU1Q7Z7A3 348 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 324.7 ms