RNA–Protein interactions for RNA: ENST00000434583.5

TRNT1-208, Transcript of tRNA nucleotidyl transferase 1, human

TSL 2

Gene TRNT1, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRNT1-208	ENST00000434583	TRAF5	O00463	557 aa		13.1	□□□□□ -0.31
TRNT1-208	ENST00000434583	CRY2	Q49AN0	593 aa		13.1	□□□□□ -0.31
TRNT1-208	ENST00000434583	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.1	□□□□□ -0.31
TRNT1-208	ENST00000434583	NYX	Q9GZU5	481 aa		13.1	□□□□□ -0.31
TRNT1-208	ENST00000434583	VPS33B	Q9H267	617 aa		13.1	□□□□□ -0.31
TRNT1-208	ENST00000434583	ADARB2	Q9NS39	739 aa	Known RBP	13.1	□□□□□ -0.31
TRNT1-208	ENST00000434583	SNRPA1	P09661	255 aa	Known RBP	13.1	□□□□□ -0.31
TRNT1-208	ENST00000434583	PDE4DIP	Q5VU43	2346 aa		13.1	□□□□□ -0.31
TRNT1-208	ENST00000434583	COL4A5	P29400	1685 aa		13.09	□□□□□ -0.31
TRNT1-208	ENST00000434583	HSPA5	P11021	654 aa	Known RBP	13.09	□□□□□ -0.31
TRNT1-208	ENST00000434583	NIM1K	Q8IY84	436 aa		13.09	□□□□□ -0.31
TRNT1-208	ENST00000434583	RIC1	Q4ADV7	1423 aa		13.09	□□□□□ -0.31
TRNT1-208	ENST00000434583	CELF2	O95319	508 aa	Known RBP	13.08	□□□□□ -0.32
TRNT1-208	ENST00000434583	HOXA10	P31260	410 aa	Predicted RBP	13.08	□□□□□ -0.32
TRNT1-208	ENST00000434583	GPRC5D	Q9NZD1	345 aa		13.08	□□□□□ -0.32
TRNT1-208	ENST00000434583	PGAP2	Q9UHJ9	254 aa		13.08	□□□□□ -0.32
TRNT1-208	ENST00000434583	KIF7	Q2M1P5	1343 aa		13.08	□□□□□ -0.32
TRNT1-208	ENST00000434583	NUP98	P52948	1817 aa		13.08	□□□□□ -0.32
TRNT1-208	ENST00000434583	KCNQ3	O43525	872 aa		13.08	□□□□□ -0.32
TRNT1-208	ENST00000434583	NOG	Q13253	232 aa		13.08	□□□□□ -0.32
TRNT1-208	ENST00000434583	ZC3H15	Q8WU90	426 aa	Known RBP	13.08	□□□□□ -0.32
TRNT1-208	ENST00000434583	RPGR	Q92834	1020 aa	Known RBP	13.08	□□□□□ -0.32
TRNT1-208	ENST00000434583	FAM177B	A6PVY3	158 aa		13.07	□□□□□ -0.32
TRNT1-208	ENST00000434583	PIP4K2A	P48426	406 aa	Predicted RBP	13.07	□□□□□ -0.32
TRNT1-208	ENST00000434583	CRAMP1	Q96RY5	1269 aa		13.07	□□□□□ -0.32
TRNT1-208	ENST00000434583	CDHR2	Q9BYE9	1310 aa		13.07	□□□□□ -0.32
TRNT1-208	ENST00000434583	CIAPIN1	Q6FI81	312 aa		13.06	□□□□□ -0.32
TRNT1-208	ENST00000434583	TMX4	Q9H1E5	349 aa	Predicted RBP	13.06	□□□□□ -0.32
TRNT1-208	ENST00000434583	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.06	□□□□□ -0.32
TRNT1-208	ENST00000434583	RBM17	Q96I25	401 aa	Known RBP	13.06	□□□□□ -0.32
TRNT1-208	ENST00000434583	NBPF26	B4DH59	902 aa		13.05	□□□□□ -0.32
TRNT1-208	ENST00000434583	ERVV-1	B6SEH8	477 aa		13.05	□□□□□ -0.32
TRNT1-208	ENST00000434583	U2SURP	O15042	1029 aa	Known RBP	13.05	□□□□□ -0.32
TRNT1-208	ENST00000434583	NBPF10	Q6P3W6	841 aa	Known RBP	13.05	□□□□□ -0.32
TRNT1-208	ENST00000434583	CDC37L1	Q7L3B6	337 aa		13.05	□□□□□ -0.32
TRNT1-208	ENST00000434583	NBPF15	Q8N660	670 aa		13.05	□□□□□ -0.32
TRNT1-208	ENST00000434583	SUPT20H	Q8NEM7	779 aa		13.05	□□□□□ -0.32
TRNT1-208	ENST00000434583	SAGE1	Q9NXZ1	904 aa		13.05	□□□□□ -0.32
TRNT1-208	ENST00000434583	AKAP11	Q9UKA4	1901 aa		13.05	□□□□□ -0.32
TRNT1-208	ENST00000434583	NPC1L1	Q9UHC9	1359 aa		13.05	□□□□□ -0.32
TRNT1-208	ENST00000434583	COL3A1	P02461	1466 aa	Predicted RBP	13.04	□□□□□ -0.32
TRNT1-208	ENST00000434583	PPEF1	O14829	653 aa	Predicted RBP	13.04	□□□□□ -0.32
TRNT1-208	ENST00000434583	PPIP5K2	O43314	1243 aa		13.04	□□□□□ -0.32
TRNT1-208	ENST00000434583	HLF	Q16534	295 aa		13.04	□□□□□ -0.32
TRNT1-208	ENST00000434583	PRPF38B	Q5VTL8	546 aa	Known RBP	13.04	□□□□□ -0.32
TRNT1-208	ENST00000434583	ZNRF3	Q9ULT6	936 aa		13.04	□□□□□ -0.32
TRNT1-208	ENST00000434583	LAMB4	A4D0S4	1761 aa		13.04	□□□□□ -0.32
TRNT1-208	ENST00000434583	CLSPN	Q9HAW4	1339 aa		13.04	□□□□□ -0.32
TRNT1-208	ENST00000434583	PRAMEF22	A3QJZ6	481 aa		13.04	□□□□□ -0.32
TRNT1-208	ENST00000434583	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.04	□□□□□ -0.32
TRNT1-208	ENST00000434583	ABCC12	Q96J65	1359 aa		13.03	□□□□□ -0.32
TRNT1-208	ENST00000434583	CXCL9	Q07325	125 aa		13.03	□□□□□ -0.32
TRNT1-208	ENST00000434583	RTF1	Q92541	710 aa	Known RBP	13.03	□□□□□ -0.32
TRNT1-208	ENST00000434583	TNIP1	Q15025	636 aa		13.02	□□□□□ -0.32
TRNT1-208	ENST00000434583	NUTM1	Q86Y26	1132 aa		13.02	□□□□□ -0.32
TRNT1-208	ENST00000434583	GMPS	P49915	693 aa	Predicted RBP	13.02	□□□□□ -0.33
TRNT1-208	ENST00000434583	AOC3	Q16853	763 aa		13.02	□□□□□ -0.33
TRNT1-208	ENST00000434583	ZNF408	Q9H9D4	720 aa		13.02	□□□□□ -0.33
TRNT1-208	ENST00000434583	HTATSF1	O43719	755 aa	Known RBP	13.01	□□□□□ -0.33
TRNT1-208	ENST00000434583	HUNK	P57058	714 aa		13.01	□□□□□ -0.33
TRNT1-208	ENST00000434583	CCDC102A	Q96A19	550 aa		13.01	□□□□□ -0.33
TRNT1-208	ENST00000434583	BCL2L13	Q9BXK5	485 aa		13.01	□□□□□ -0.33
TRNT1-208	ENST00000434583	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.01	□□□□□ -0.33
TRNT1-208	ENST00000434583	ATP6V0A2	Q9Y487	856 aa		13.01	□□□□□ -0.33
TRNT1-208	ENST00000434583	MAP3K15	Q6ZN16	1313 aa		13.01	□□□□□ -0.33
TRNT1-208	ENST00000434583	PER1	O15534	1290 aa	Predicted RBP	13	□□□□□ -0.33
TRNT1-208	ENST00000434583	PRKAR2B	P31323	418 aa		12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	SOX10	P56693	466 aa		12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	RGMB	Q6NW40	437 aa		12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	KIF6	Q6ZMV9	814 aa		12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	PHACTR3	Q96KR7	559 aa		12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	POLR2A	P24928	1970 aa	Known RBP	12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583		H7C1D1	291 aa		12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	HIRA	P54198	1017 aa	Predicted RBP	12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	CC2D1B	Q5T0F9	858 aa	Known RBP	12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	PPP1R42	Q7Z4L9	355 aa		12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	REM2	Q8IYK8	340 aa	Predicted RBP	12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	NLRP3	Q96P20	1036 aa		12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	RSPH6A	Q9H0K4	717 aa		12.99	□□□□□ -0.33
TRNT1-208	ENST00000434583	TCERG1	O14776	1098 aa	Known RBP	12.98	□□□□□ -0.33
TRNT1-208	ENST00000434583	KIAA2012	Q0VF49	1180 aa		12.98	□□□□□ -0.33
TRNT1-208	ENST00000434583	TAF7	Q15545	349 aa	Predicted RBP	12.98	□□□□□ -0.33
TRNT1-208	ENST00000434583	SUSD4	Q5VX71	490 aa		12.98	□□□□□ -0.33
TRNT1-208	ENST00000434583	C2orf69	Q8N8R5	385 aa		12.98	□□□□□ -0.33
TRNT1-208	ENST00000434583	ZIC5	Q96T25	663 aa		12.98	□□□□□ -0.33
TRNT1-208	ENST00000434583	CNOT7	Q9UIV1	285 aa	Known RBP	12.98	□□□□□ -0.33
TRNT1-208	ENST00000434583	TNRC18	O15417	2968 aa	Predicted RBP	12.98	□□□□□ -0.33
TRNT1-208	ENST00000434583	FAM155A	B1AL88	458 aa	Predicted RBP	12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	BBOX1	O75936	387 aa		12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	PARP10	Q53GL7	1025 aa		12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	CTU1	Q7Z7A3	348 aa	Known RBP	12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	USP48	Q86UV5	1035 aa		12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	SP8	Q8IXZ3	490 aa		12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	ZNF34	Q8IZ26	560 aa		12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	ANKRD36C	Q5JPF3	1778 aa		12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	NTSR2	O95665	410 aa		12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	KIF23	Q02241	960 aa	Predicted RBP	12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	SLC10A5	Q5PT55	438 aa		12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	DPP8	Q6V1X1	898 aa	Predicted RBP	12.97	□□□□□ -0.33
TRNT1-208	ENST00000434583	MCM10	Q7L590	875 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms