RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PELP1Q8IZL8 1130 aaKnown RBP23.57■■□□□ 1.36
HLA-F-220ENST00000434407 RNF123Q5XPI4 1314 aa23.57■■□□□ 1.36
HLA-F-220ENST00000434407 ABCC12Q96J65 1359 aa23.56■■□□□ 1.36
HLA-F-220ENST00000434407 KSR2Q6VAB6 950 aa23.56■■□□□ 1.36
HLA-F-220ENST00000434407 NUTM1Q86Y26 1132 aa23.56■■□□□ 1.36
HLA-F-220ENST00000434407 UTP14AQ9BVJ6 771 aaKnown RBP23.56■■□□□ 1.36
HLA-F-220ENST00000434407 ADCY9O60503 1353 aa23.55■■□□□ 1.36
HLA-F-220ENST00000434407 TNRC6CQ9HCJ0 1690 aaKnown RBP23.55■■□□□ 1.36
HLA-F-220ENST00000434407 SRGNP10124 158 aa23.55■■□□□ 1.36
HLA-F-220ENST00000434407 HNRNPUQ00839 825 aaKnown RBP eCLIP23.55■■□□□ 1.36
HLA-F-220ENST00000434407 FLIIQ13045 1269 aa23.55■■□□□ 1.36
HLA-F-220ENST00000434407 ERFEQ4G0M1 354 aa23.55■■□□□ 1.36
HLA-F-220ENST00000434407 WWC3Q9ULE0 1092 aa23.55■■□□□ 1.36
HLA-F-220ENST00000434407 PI4KAP2A4QPH2 592 aa23.54■■□□□ 1.36
HLA-F-220ENST00000434407 GTF2E1P29083 439 aaPredicted RBP23.54■■□□□ 1.36
HLA-F-220ENST00000434407 DALRD3Q5D0E6 543 aaKnown RBP23.54■■□□□ 1.36
HLA-F-220ENST00000434407 SLC10A5Q5PT55 438 aa23.54■■□□□ 1.36
HLA-F-220ENST00000434407 PI4KAP1Q8N8J0 262 aa23.54■■□□□ 1.36
HLA-F-220ENST00000434407 METTL22Q9BUU2 404 aaPredicted RBP23.54■■□□□ 1.36
HLA-F-220ENST00000434407 BCS1LQ9Y276 419 aa23.54■■□□□ 1.36
HLA-F-220ENST00000434407 ZNF428Q96B54 188 aa23.53■■□□□ 1.36
HLA-F-220ENST00000434407 MAP3K2Q9Y2U5 619 aa23.53■■□□□ 1.36
HLA-F-220ENST00000434407 ATP5J2-PTCD1G3V325 749 aa23.52■■□□□ 1.36
HLA-F-220ENST00000434407 CRY2Q49AN0 593 aa23.52■■□□□ 1.36
HLA-F-220ENST00000434407 STYK1Q6J9G0 422 aa23.52■■□□□ 1.36
HLA-F-220ENST00000434407 TTLL6Q8N841 843 aa23.52■■□□□ 1.36
HLA-F-220ENST00000434407 MASTLQ96GX5 879 aa23.52■■□□□ 1.36
HLA-F-220ENST00000434407 CT47B1P0C2W7 299 aaPredicted RBP23.51■■□□□ 1.35
HLA-F-220ENST00000434407 SLX4Q8IY92 1834 aa23.51■■□□□ 1.35
HLA-F-220ENST00000434407 LAMB2P55268 1798 aa23.5■■□□□ 1.35
HLA-F-220ENST00000434407 CCDC191Q8NCU4 936 aa23.5■■□□□ 1.35
HLA-F-220ENST00000434407 MYD88Q99836 296 aa23.5■■□□□ 1.35
HLA-F-220ENST00000434407 TRMT112Q9UI30 125 aaKnown RBP23.5■■□□□ 1.35
HLA-F-220ENST00000434407 CACNA1SQ13698 1873 aa23.49■■□□□ 1.35
HLA-F-220ENST00000434407 NPR1P16066 1061 aa23.49■■□□□ 1.35
HLA-F-220ENST00000434407 SYNE4Q8N205 404 aa23.49■■□□□ 1.35
HLA-F-220ENST00000434407 ZNF622Q969S3 477 aaKnown RBP eCLIP23.49■■□□□ 1.35
HLA-F-220ENST00000434407 DDX60Q8IY21 1712 aaKnown RBP23.49■■□□□ 1.35
HLA-F-220ENST00000434407 ZBED9Q6R2W3 1325 aa23.49■■□□□ 1.35
HLA-F-220ENST00000434407 SH3TC1Q8TE82 1336 aa23.49■■□□□ 1.35
HLA-F-220ENST00000434407 IGKV5-2P06315 115 aa23.48■■□□□ 1.35
HLA-F-220ENST00000434407 FKBP5Q13451 457 aaPredicted RBP23.48■■□□□ 1.35
HLA-F-220ENST00000434407 CNKSR1Q969H4 720 aa23.48■■□□□ 1.35
HLA-F-220ENST00000434407 MRPL50Q8N5N7 158 aaKnown RBP23.47■■□□□ 1.35
HLA-F-220ENST00000434407 SSH1Q8WYL5 1049 aa23.47■■□□□ 1.35
HLA-F-220ENST00000434407 HOXA10P31260 410 aaPredicted RBP23.46■■□□□ 1.35
HLA-F-220ENST00000434407 ALDH1L2Q3SY69 923 aa23.46■■□□□ 1.35
HLA-F-220ENST00000434407 C3orf67Q6ZVT6 689 aa23.46■■□□□ 1.35
HLA-F-220ENST00000434407 ZBTB38Q8NAP3 1195 aaPredicted RBP23.46■■□□□ 1.35
HLA-F-220ENST00000434407 DNAAF4Q8WXU2 420 aa23.46■■□□□ 1.35
HLA-F-220ENST00000434407 FAM89AQ96GI7 184 aa23.45■■□□□ 1.34
HLA-F-220ENST00000434407 NLRP3Q96P20 1036 aa23.45■■□□□ 1.34
HLA-F-220ENST00000434407 CWC25Q9NXE8 425 aaPredicted RBP23.45■■□□□ 1.34
HLA-F-220ENST00000434407 SBF1O95248 1867 aa23.45■■□□□ 1.34
HLA-F-220ENST00000434407 PCCAP05165 728 aaPredicted RBP23.44■■□□□ 1.34
HLA-F-220ENST00000434407 HCLS1P14317 486 aaPredicted RBP23.44■■□□□ 1.34
HLA-F-220ENST00000434407 NEXNQ0ZGT2 675 aa23.44■■□□□ 1.34
HLA-F-220ENST00000434407 PRPF40BQ6NWY9 871 aaKnown RBP23.44■■□□□ 1.34
HLA-F-220ENST00000434407 FER1L6Q2WGJ9 1857 aa23.43■■□□□ 1.34
HLA-F-220ENST00000434407 NEURL1BA8MQ27 555 aa23.43■■□□□ 1.34
HLA-F-220ENST00000434407 ALDH1B1P30837 517 aa23.43■■□□□ 1.34
HLA-F-220ENST00000434407 C7orf43Q8WVR3 580 aa23.43■■□□□ 1.34
HLA-F-220ENST00000434407 BRPF1P55201 1214 aaPredicted RBP23.42■■□□□ 1.34
HLA-F-220ENST00000434407 LINS1Q8NG48 757 aa23.42■■□□□ 1.34
HLA-F-220ENST00000434407 CRAMP1Q96RY5 1269 aa23.42■■□□□ 1.34
HLA-F-220ENST00000434407 F6X3S4 739 aa23.41■■□□□ 1.34
HLA-F-220ENST00000434407 HOXD11P31277 338 aaPredicted RBP23.41■■□□□ 1.34
HLA-F-220ENST00000434407 CWF19L2Q2TBE0 894 aaKnown RBP23.41■■□□□ 1.34
HLA-F-220ENST00000434407 ARHGAP27Q6ZUM4 889 aa23.41■■□□□ 1.34
HLA-F-220ENST00000434407 PTPRCP08575 1304 aa23.4■■□□□ 1.34
HLA-F-220ENST00000434407 IRS4O14654 1257 aaPredicted RBP23.4■■□□□ 1.34
HLA-F-220ENST00000434407 BEND3Q5T5X7 828 aa23.4■■□□□ 1.34
HLA-F-220ENST00000434407 RPGRQ92834 1020 aaKnown RBP23.4■■□□□ 1.34
HLA-F-220ENST00000434407 RBM17Q96I25 401 aaKnown RBP23.4■■□□□ 1.34
HLA-F-220ENST00000434407 MYH3P11055 1940 aa23.39■■□□□ 1.34
HLA-F-220ENST00000434407 CDHR2Q9BYE9 1310 aa23.39■■□□□ 1.34
HLA-F-220ENST00000434407 YY1P25490 414 aa23.39■■□□□ 1.33
HLA-F-220ENST00000434407 RARSP54136 660 aaKnown RBP23.39■■□□□ 1.33
HLA-F-220ENST00000434407 GCKRQ14397 625 aa23.39■■□□□ 1.33
HLA-F-220ENST00000434407 SF3B3Q15393 1217 aaKnown RBP23.39■■□□□ 1.33
HLA-F-220ENST00000434407 TAF1P21675 1872 aa23.39■■□□□ 1.33
HLA-F-220ENST00000434407 CCDC88AQ3V6T2 1871 aa23.39■■□□□ 1.33
HLA-F-220ENST00000434407 H7C1W4 665 aa23.38■■□□□ 1.33
HLA-F-220ENST00000434407 C21orf2O43822 256 aa23.38■■□□□ 1.33
HLA-F-220ENST00000434407 HSP90B1P14625 803 aaKnown RBP23.38■■□□□ 1.33
HLA-F-220ENST00000434407 RTL5Q5HYW3 569 aaPredicted RBP23.38■■□□□ 1.33
HLA-F-220ENST00000434407 BCL2L13Q9BXK5 485 aa23.38■■□□□ 1.33
HLA-F-220ENST00000434407 SOGA3Q5TF21 947 aa23.37■■□□□ 1.33
HLA-F-220ENST00000434407 SMC4Q9NTJ3 1288 aa23.37■■□□□ 1.33
HLA-F-220ENST00000434407 CASP7P55210 303 aa23.36■■□□□ 1.33
HLA-F-220ENST00000434407 ABCC4O15439 1325 aa23.35■■□□□ 1.33
HLA-F-220ENST00000434407 SNED1Q8TER0 1413 aa23.35■■□□□ 1.33
HLA-F-220ENST00000434407 NFKBIEO00221 500 aa23.35■■□□□ 1.33
HLA-F-220ENST00000434407 PDE8AO60658 829 aa23.35■■□□□ 1.33
HLA-F-220ENST00000434407 JARID2Q92833 1246 aaPredicted RBP23.35■■□□□ 1.33
HLA-F-220ENST00000434407 LTBP3Q9NS15 1303 aa23.34■■□□□ 1.33
HLA-F-220ENST00000434407 DICER1Q9UPY3 1922 aaKnown RBP23.34■■□□□ 1.33
HLA-F-220ENST00000434407 ALDH1L1O75891 902 aa23.34■■□□□ 1.33
HLA-F-220ENST00000434407 ZNF219Q9P2Y4 722 aaPredicted RBP23.34■■□□□ 1.33
HLA-F-220ENST00000434407 DDX46Q7L014 1031 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms