RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 WDR33Q9C0J8 1336 aaKnown RBP14.59□□□□□ -0.07
SEMA3F-206ENST00000434342 LRSAM1Q6UWE0 723 aa14.58□□□□□ -0.07
SEMA3F-206ENST00000434342 USP48Q86UV5 1035 aa14.58□□□□□ -0.07
SEMA3F-206ENST00000434342 PROSER2Q86WR7 435 aaPredicted RBP14.58□□□□□ -0.07
SEMA3F-206ENST00000434342 SUCLG2Q96I99 432 aa14.58□□□□□ -0.07
SEMA3F-206ENST00000434342 DNAJC2Q99543 621 aaKnown RBP14.58□□□□□ -0.07
SEMA3F-206ENST00000434342 BOLA2Q9H3K6 86 aa14.58□□□□□ -0.07
SEMA3F-206ENST00000434342 BICC1Q9H694 974 aaKnown RBP14.58□□□□□ -0.07
SEMA3F-206ENST00000434342 SMC3Q9UQE7 1217 aa14.58□□□□□ -0.07
SEMA3F-206ENST00000434342 GRM8O00222 908 aa14.58□□□□□ -0.08
SEMA3F-206ENST00000434342 CSB-PGBD3P0DP91 1061 aa14.58□□□□□ -0.08
SEMA3F-206ENST00000434342 RAPGEF4Q8WZA2 1011 aa14.58□□□□□ -0.08
SEMA3F-206ENST00000434342 DDX17Q92841 729 aaKnown RBP14.58□□□□□ -0.08
SEMA3F-206ENST00000434342 LIMCH1Q9UPQ0 1083 aa14.58□□□□□ -0.08
SEMA3F-206ENST00000434342 DDX58O95786 925 aaKnown RBP14.58□□□□□ -0.08
SEMA3F-206ENST00000434342 KIAA2012Q0VF49 1180 aa14.58□□□□□ -0.08
SEMA3F-206ENST00000434342 ADCK5Q3MIX3 580 aa14.58□□□□□ -0.08
SEMA3F-206ENST00000434342 CCDC83Q8IWF9 413 aa14.58□□□□□ -0.08
SEMA3F-206ENST00000434342 CNPY4Q8N129 248 aa14.58□□□□□ -0.08
SEMA3F-206ENST00000434342 ALDH1L1O75891 902 aa14.57□□□□□ -0.08
SEMA3F-206ENST00000434342 RUFY3Q7L099 469 aa14.57□□□□□ -0.08
SEMA3F-206ENST00000434342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.57□□□□□ -0.08
SEMA3F-206ENST00000434342 NFATC2IPQ8NCF5 419 aa14.57□□□□□ -0.08
SEMA3F-206ENST00000434342 HYPKQ9NX55 129 aa14.57□□□□□ -0.08
SEMA3F-206ENST00000434342 CCDC9Q9Y3X0 531 aaKnown RBP14.57□□□□□ -0.08
SEMA3F-206ENST00000434342 LINS1Q8NG48 757 aa14.57□□□□□ -0.08
SEMA3F-206ENST00000434342 FAM227BQ96M60 508 aa14.57□□□□□ -0.08
SEMA3F-206ENST00000434342 TTC41PQ6P2S7 1318 aa14.56□□□□□ -0.08
SEMA3F-206ENST00000434342 FIBPO43427 364 aa14.56□□□□□ -0.08
SEMA3F-206ENST00000434342 EAF2Q96CJ1 260 aaPredicted RBP14.56□□□□□ -0.08
SEMA3F-206ENST00000434342 HDAC5Q9UQL6 1122 aa14.56□□□□□ -0.08
SEMA3F-206ENST00000434342 CNPY2Q9Y2B0 182 aa14.56□□□□□ -0.08
SEMA3F-206ENST00000434342 TCEANC2Q96MN5 208 aa14.56□□□□□ -0.08
SEMA3F-206ENST00000434342 PDRG1Q9NUG6 133 aa14.56□□□□□ -0.08
SEMA3F-206ENST00000434342 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.56□□□□□ -0.08
SEMA3F-206ENST00000434342 LARGE1O95461 756 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 CAPN2P17655 700 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 ERC1Q8IUD2 1116 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 TLR7Q9NYK1 1049 aaKnown RBP14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 PXDNLA1KZ92 1463 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 SYT1P21579 422 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 NEXNQ0ZGT2 675 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 COPS6Q7L5N1 327 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 SYAP1Q96A49 352 aaPredicted RBP14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 DDX21Q9NR30 783 aaKnown RBP eCLIP14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 SASH1O94885 1247 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 CHRM1P11229 460 aaPredicted RBP14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 ZKSCAN1P17029 563 aaPredicted RBP14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 TNNT3P45378 269 aaPredicted RBP14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 NECAB1Q8N987 351 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 CABLES1Q8TDN4 633 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 XAGE3Q8WTP9 111 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 CCDC39Q9UFE4 941 aa14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.55□□□□□ -0.08
SEMA3F-206ENST00000434342 STX6O43752 255 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 EP400NLQ6ZTU2 488 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 TIGD1Q96MW7 591 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 TTC14Q96N46 770 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 MYD88Q99836 296 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 FSD1Q9BTV5 496 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 PXDNQ92626 1479 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 VPS37CA5D8V6 355 aaPredicted RBP14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 PRR29P0C7W0 189 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 MTX1Q13505 466 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 ZNF790Q6PG37 636 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 EVI5LQ96CN4 794 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 KAZALD1Q96I82 304 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 CYP46A1Q9Y6A2 500 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 HS1BP3Q53T59 392 aa14.54□□□□□ -0.08
SEMA3F-206ENST00000434342 ZSCAN22P10073 491 aaPredicted RBP14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 CHRNA2Q15822 529 aa14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 EDC3Q96F86 508 aaKnown RBP14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 TSPY26PQ9H489 355 aa14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 NMIQ13287 307 aaPredicted RBP14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 TTC12Q9H892 705 aaPredicted RBP14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 XRN1Q8IZH2 1706 aaKnown RBP14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 IGKV5-2P06315 115 aa14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 GJB2P29033 226 aa14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 PLCB2Q00722 1185 aa14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 RBM8AQ9Y5S9 174 aaKnown RBP14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 NDUFB9Q9Y6M9 179 aa14.53□□□□□ -0.08
SEMA3F-206ENST00000434342 ZNF496Q96IT1 587 aaPredicted RBP14.52□□□□□ -0.08
SEMA3F-206ENST00000434342 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.08
SEMA3F-206ENST00000434342 FAM208AQ9UK61 1670 aaKnown RBP14.52□□□□□ -0.08
SEMA3F-206ENST00000434342 ATP5J2-PTCD1G3V325 749 aa14.52□□□□□ -0.09
SEMA3F-206ENST00000434342 EPB41L2O43491 1005 aaKnown RBP14.52□□□□□ -0.09
SEMA3F-206ENST00000434342 PTCD1O75127 700 aaKnown RBP14.52□□□□□ -0.09
SEMA3F-206ENST00000434342 LARP1Q6PKG0 1096 aaKnown RBP14.52□□□□□ -0.09
SEMA3F-206ENST00000434342 PDLIM2Q96JY6 352 aa14.52□□□□□ -0.09
SEMA3F-206ENST00000434342 CHMP3Q9Y3E7 222 aa14.52□□□□□ -0.09
SEMA3F-206ENST00000434342 USP16Q9Y5T5 823 aa14.52□□□□□ -0.09
SEMA3F-206ENST00000434342 TATP17735 454 aaPredicted RBP14.51□□□□□ -0.09
SEMA3F-206ENST00000434342 COL9A3Q14050 684 aaPredicted RBP14.51□□□□□ -0.09
SEMA3F-206ENST00000434342 PDIA6Q15084 440 aa14.51□□□□□ -0.09
SEMA3F-206ENST00000434342 EPHA10Q5JZY3 1008 aa14.51□□□□□ -0.09
SEMA3F-206ENST00000434342 TTC5Q8N0Z6 440 aa14.51□□□□□ -0.09
SEMA3F-206ENST00000434342 ADGRL3Q9HAR2 1447 aa14.51□□□□□ -0.09
SEMA3F-206ENST00000434342 FERMT3Q86UX7 667 aa14.51□□□□□ -0.09
SEMA3F-206ENST00000434342 LRRC37A3O60309 1634 aa14.51□□□□□ -0.09
SEMA3F-206ENST00000434342 LOC102724159A0A0B4J2E5 919 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms