RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 C3orf67Q6ZVT6 689 aa24.31■■□□□ 1.48
RPUSD3-207ENST00000433555 SBF1O95248 1867 aa24.3■■□□□ 1.48
RPUSD3-207ENST00000433555 FER1L6Q2WGJ9 1857 aa24.3■■□□□ 1.48
RPUSD3-207ENST00000433555 GRIN3BO60391 1043 aa24.3■■□□□ 1.48
RPUSD3-207ENST00000433555 SLC4A2P04920 1241 aa24.3■■□□□ 1.48
RPUSD3-207ENST00000433555 SRGNP10124 158 aa24.3■■□□□ 1.48
RPUSD3-207ENST00000433555 RIC3Q7Z5B4 369 aa24.3■■□□□ 1.48
RPUSD3-207ENST00000433555 TRMT2AQ8IZ69 625 aaKnown RBP24.3■■□□□ 1.48
RPUSD3-207ENST00000433555 SYNE4Q8N205 404 aa24.3■■□□□ 1.48
RPUSD3-207ENST00000433555 KLRG2A4D1S0 409 aaPredicted RBP24.29■■□□□ 1.48
RPUSD3-207ENST00000433555 PPP1R42Q7Z4L9 355 aa24.29■■□□□ 1.48
RPUSD3-207ENST00000433555 UTP14AQ9BVJ6 771 aaKnown RBP24.29■■□□□ 1.48
RPUSD3-207ENST00000433555 CHMP4AQ9BY43 222 aa24.29■■□□□ 1.48
RPUSD3-207ENST00000433555 TAF1P21675 1872 aa24.29■■□□□ 1.48
RPUSD3-207ENST00000433555 GTF2E1P29083 439 aaPredicted RBP24.28■■□□□ 1.48
RPUSD3-207ENST00000433555 HNRNPUQ00839 825 aaKnown RBP eCLIP24.28■■□□□ 1.48
RPUSD3-207ENST00000433555 FLIIQ13045 1269 aa24.28■■□□□ 1.48
RPUSD3-207ENST00000433555 ZNF622Q969S3 477 aaKnown RBP eCLIP24.28■■□□□ 1.48
RPUSD3-207ENST00000433555 MYD88Q99836 296 aa24.28■■□□□ 1.48
RPUSD3-207ENST00000433555 MAP3K2Q9Y2U5 619 aa24.28■■□□□ 1.48
RPUSD3-207ENST00000433555 CCDC88AQ3V6T2 1871 aa24.28■■□□□ 1.48
RPUSD3-207ENST00000433555 COL4A1P02462 1669 aa24.27■■□□□ 1.48
RPUSD3-207ENST00000433555 PI4KAP2A4QPH2 592 aa24.26■■□□□ 1.47
RPUSD3-207ENST00000433555 DDX58O95786 925 aaKnown RBP24.26■■□□□ 1.47
RPUSD3-207ENST00000433555 CRY2Q49AN0 593 aa24.26■■□□□ 1.47
RPUSD3-207ENST00000433555 STYK1Q6J9G0 422 aa24.26■■□□□ 1.47
RPUSD3-207ENST00000433555 KSR2Q6VAB6 950 aa24.26■■□□□ 1.47
RPUSD3-207ENST00000433555 TTLL6Q8N841 843 aa24.26■■□□□ 1.47
RPUSD3-207ENST00000433555 PI4KAP1Q8N8J0 262 aa24.26■■□□□ 1.47
RPUSD3-207ENST00000433555 METTL22Q9BUU2 404 aaPredicted RBP24.26■■□□□ 1.47
RPUSD3-207ENST00000433555 PDZRN3Q9UPQ7 1066 aa24.26■■□□□ 1.47
RPUSD3-207ENST00000433555 RNF123Q5XPI4 1314 aa24.26■■□□□ 1.47
RPUSD3-207ENST00000433555 TIAM2Q8IVF5 1701 aa24.25■■□□□ 1.47
RPUSD3-207ENST00000433555 MASTLQ96GX5 879 aa24.25■■□□□ 1.47
RPUSD3-207ENST00000433555 MYH3P11055 1940 aa24.24■■□□□ 1.47
RPUSD3-207ENST00000433555 YY1P25490 414 aa24.24■■□□□ 1.47
RPUSD3-207ENST00000433555 TRMT112Q9UI30 125 aaKnown RBP24.24■■□□□ 1.47
RPUSD3-207ENST00000433555 IGKV5-2P06315 115 aa24.23■■□□□ 1.47
RPUSD3-207ENST00000433555 NPR1P16066 1061 aa24.23■■□□□ 1.47
RPUSD3-207ENST00000433555 TRIM28Q13263 835 aaKnown RBP24.23■■□□□ 1.47
RPUSD3-207ENST00000433555 PRPF40BQ6NWY9 871 aaKnown RBP24.23■■□□□ 1.47
RPUSD3-207ENST00000433555 SLC51AQ86UW1 340 aa24.23■■□□□ 1.47
RPUSD3-207ENST00000433555 SH3TC1Q8TE82 1336 aa24.23■■□□□ 1.47
RPUSD3-207ENST00000433555 HCLS1P14317 486 aaPredicted RBP24.22■■□□□ 1.47
RPUSD3-207ENST00000433555 FKBP5Q13451 457 aaPredicted RBP24.22■■□□□ 1.47
RPUSD3-207ENST00000433555 SLC10A5Q5PT55 438 aa24.22■■□□□ 1.47
RPUSD3-207ENST00000433555 ZNF219Q9P2Y4 722 aaPredicted RBP24.22■■□□□ 1.47
RPUSD3-207ENST00000433555 RASSF7Q02833 373 aa24.21■■□□□ 1.47
RPUSD3-207ENST00000433555 RTL5Q5HYW3 569 aaPredicted RBP24.21■■□□□ 1.47
RPUSD3-207ENST00000433555 ARHGAP27Q6ZUM4 889 aa24.21■■□□□ 1.47
RPUSD3-207ENST00000433555 FAM89AQ96GI7 184 aa24.21■■□□□ 1.47
RPUSD3-207ENST00000433555 CNKSR1Q969H4 720 aa24.2■■□□□ 1.46
RPUSD3-207ENST00000433555 LRRC37AA6NMS7 1700 aa24.2■■□□□ 1.46
RPUSD3-207ENST00000433555 SNED1Q8TER0 1413 aa24.19■■□□□ 1.46
RPUSD3-207ENST00000433555 F6X3S4 739 aa24.19■■□□□ 1.46
RPUSD3-207ENST00000433555 C21orf2O43822 256 aa24.19■■□□□ 1.46
RPUSD3-207ENST00000433555 CWF19L2Q2TBE0 894 aaKnown RBP24.19■■□□□ 1.46
RPUSD3-207ENST00000433555 MRPL50Q8N5N7 158 aaKnown RBP24.19■■□□□ 1.46
RPUSD3-207ENST00000433555 SSH1Q8WYL5 1049 aa24.19■■□□□ 1.46
RPUSD3-207ENST00000433555 JARID2Q92833 1246 aaPredicted RBP24.19■■□□□ 1.46
RPUSD3-207ENST00000433555 BCL2L13Q9BXK5 485 aa24.19■■□□□ 1.46
RPUSD3-207ENST00000433555 DICER1Q9UPY3 1922 aaKnown RBP24.19■■□□□ 1.46
RPUSD3-207ENST00000433555 OLFM4Q6UX06 510 aa24.18■■□□□ 1.46
RPUSD3-207ENST00000433555 CCDC191Q8NCU4 936 aa24.18■■□□□ 1.46
RPUSD3-207ENST00000433555 DNAAF4Q8WXU2 420 aa24.18■■□□□ 1.46
RPUSD3-207ENST00000433555 CWC25Q9NXE8 425 aaPredicted RBP24.18■■□□□ 1.46
RPUSD3-207ENST00000433555 SPEF2Q9C093 1822 aa24.18■■□□□ 1.46
RPUSD3-207ENST00000433555 NEURL1BA8MQ27 555 aa24.17■■□□□ 1.46
RPUSD3-207ENST00000433555 NFKBIEO00221 500 aa24.17■■□□□ 1.46
RPUSD3-207ENST00000433555 HOXA10P31260 410 aaPredicted RBP24.17■■□□□ 1.46
RPUSD3-207ENST00000433555 PRELPP51888 382 aa24.17■■□□□ 1.46
RPUSD3-207ENST00000433555 RPGRQ92834 1020 aaKnown RBP24.17■■□□□ 1.46
RPUSD3-207ENST00000433555 ZBED9Q6R2W3 1325 aa24.16■■□□□ 1.46
RPUSD3-207ENST00000433555 ZBTB38Q8NAP3 1195 aaPredicted RBP24.16■■□□□ 1.46
RPUSD3-207ENST00000433555 C7orf43Q8WVR3 580 aa24.16■■□□□ 1.46
RPUSD3-207ENST00000433555 NLRP3Q96P20 1036 aa24.16■■□□□ 1.46
RPUSD3-207ENST00000433555 ABCC4O15439 1325 aa24.15■■□□□ 1.46
RPUSD3-207ENST00000433555 IRS4O14654 1257 aaPredicted RBP24.14■■□□□ 1.45
RPUSD3-207ENST00000433555 PCCAP05165 728 aaPredicted RBP24.14■■□□□ 1.45
RPUSD3-207ENST00000433555 NEXNQ0ZGT2 675 aa24.14■■□□□ 1.45
RPUSD3-207ENST00000433555 RBM17Q96I25 401 aaKnown RBP24.12■■□□□ 1.45
RPUSD3-207ENST00000433555 CRAMP1Q96RY5 1269 aa24.12■■□□□ 1.45
RPUSD3-207ENST00000433555 CDHR2Q9BYE9 1310 aa24.11■■□□□ 1.45
RPUSD3-207ENST00000433555 LTBP1Q14766 1721 aa24.11■■□□□ 1.45
RPUSD3-207ENST00000433555 ALDH1B1P30837 517 aa24.11■■□□□ 1.45
RPUSD3-207ENST00000433555 ALDH1L2Q3SY69 923 aa24.11■■□□□ 1.45
RPUSD3-207ENST00000433555 BEND3Q5T5X7 828 aa24.11■■□□□ 1.45
RPUSD3-207ENST00000433555 SMC4Q9NTJ3 1288 aa24.11■■□□□ 1.45
RPUSD3-207ENST00000433555 CT47B1P0C2W7 299 aaPredicted RBP24.1■■□□□ 1.45
RPUSD3-207ENST00000433555 GCKRQ14397 625 aa24.1■■□□□ 1.45
RPUSD3-207ENST00000433555 C9orf131Q5VYM1 1079 aa24.1■■□□□ 1.45
RPUSD3-207ENST00000433555 LINS1Q8NG48 757 aa24.1■■□□□ 1.45
RPUSD3-207ENST00000433555 DUOX1Q9NRD9 1551 aa24.1■■□□□ 1.45
RPUSD3-207ENST00000433555 PPEF1O14829 653 aaPredicted RBP24.09■■□□□ 1.45
RPUSD3-207ENST00000433555 CASP7P55210 303 aa24.09■■□□□ 1.45
RPUSD3-207ENST00000433555 SF3B3Q15393 1217 aaKnown RBP24.09■■□□□ 1.45
RPUSD3-207ENST00000433555 CCDC93Q567U6 631 aa24.09■■□□□ 1.45
RPUSD3-207ENST00000433555 ZNF784Q8NCA9 323 aaPredicted RBP24.09■■□□□ 1.45
RPUSD3-207ENST00000433555 UBE3BQ7Z3V4 1068 aa24.08■■□□□ 1.45
RPUSD3-207ENST00000433555 RNF181Q9P0P0 153 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms