RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 ANKRD31Q8N7Z5 1873 aa22.27■■□□□ 1.16
CTDSP1-203ENST00000431127 CNKSR1Q969H4 720 aa22.27■■□□□ 1.16
CTDSP1-203ENST00000431127 ISCA1Q9BUE6 129 aa22.27■■□□□ 1.16
CTDSP1-203ENST00000431127 RIC1Q4ADV7 1423 aa22.26■■□□□ 1.15
CTDSP1-203ENST00000431127 NPR1P16066 1061 aa22.26■■□□□ 1.15
CTDSP1-203ENST00000431127 KSR2Q6VAB6 950 aa22.26■■□□□ 1.15
CTDSP1-203ENST00000431127 GPBP1L1Q9HC44 474 aaPredicted RBP22.26■■□□□ 1.15
CTDSP1-203ENST00000431127 TRMT112Q9UI30 125 aaKnown RBP22.26■■□□□ 1.15
CTDSP1-203ENST00000431127 ARHGAP27Q6ZUM4 889 aa22.25■■□□□ 1.15
CTDSP1-203ENST00000431127 ADCY9O60503 1353 aa22.25■■□□□ 1.15
CTDSP1-203ENST00000431127 ABCC12Q96J65 1359 aa22.25■■□□□ 1.15
CTDSP1-203ENST00000431127 ATP5J2-PTCD1G3V325 749 aa22.24■■□□□ 1.15
CTDSP1-203ENST00000431127 FLIIQ13045 1269 aa22.24■■□□□ 1.15
CTDSP1-203ENST00000431127 CRY2Q49AN0 593 aa22.24■■□□□ 1.15
CTDSP1-203ENST00000431127 SLC10A5Q5PT55 438 aa22.24■■□□□ 1.15
CTDSP1-203ENST00000431127 METTL22Q9BUU2 404 aaPredicted RBP22.24■■□□□ 1.15
CTDSP1-203ENST00000431127 DLEC1Q9Y238 1755 aa22.24■■□□□ 1.15
CTDSP1-203ENST00000431127 SH3TC1Q8TE82 1336 aa22.24■■□□□ 1.15
CTDSP1-203ENST00000431127 ANKRD36CQ5JPF3 1778 aa22.23■■□□□ 1.15
CTDSP1-203ENST00000431127 PI4KAP2A4QPH2 592 aa22.23■■□□□ 1.15
CTDSP1-203ENST00000431127 PI4KAP1Q8N8J0 262 aa22.23■■□□□ 1.15
CTDSP1-203ENST00000431127 CDCA7LQ96GN5 454 aa22.23■■□□□ 1.15
CTDSP1-203ENST00000431127 NLRP3Q96P20 1036 aa22.23■■□□□ 1.15
CTDSP1-203ENST00000431127 MAP3K2Q9Y2U5 619 aa22.23■■□□□ 1.15
CTDSP1-203ENST00000431127 ALDH1B1P30837 517 aa22.22■■□□□ 1.15
CTDSP1-203ENST00000431127 G2E3Q7L622 706 aa22.22■■□□□ 1.15
CTDSP1-203ENST00000431127 TRMT2AQ8IZ69 625 aaKnown RBP22.22■■□□□ 1.15
CTDSP1-203ENST00000431127 ZNF428Q96B54 188 aa22.22■■□□□ 1.15
CTDSP1-203ENST00000431127 MYD88Q99836 296 aa22.22■■□□□ 1.15
CTDSP1-203ENST00000431127 NEXNQ0ZGT2 675 aa22.21■■□□□ 1.15
CTDSP1-203ENST00000431127 FKBP5Q13451 457 aaPredicted RBP22.21■■□□□ 1.15
CTDSP1-203ENST00000431127 CCDC191Q8NCU4 936 aa22.21■■□□□ 1.15
CTDSP1-203ENST00000431127 ZNF526Q8TF50 670 aaPredicted RBP22.21■■□□□ 1.15
CTDSP1-203ENST00000431127 RPGRQ92834 1020 aaKnown RBP22.21■■□□□ 1.15
CTDSP1-203ENST00000431127 ARFGEF1Q9Y6D6 1849 aa22.21■■□□□ 1.15
CTDSP1-203ENST00000431127 ARFGEF2Q9Y6D5 1785 aa22.2■■□□□ 1.14
CTDSP1-203ENST00000431127 HNRNPUQ00839 825 aaKnown RBP eCLIP22.2■■□□□ 1.14
CTDSP1-203ENST00000431127 PRPF40BQ6NWY9 871 aaKnown RBP22.2■■□□□ 1.14
CTDSP1-203ENST00000431127 COL11A2P13942 1736 aaPredicted RBP22.2■■□□□ 1.14
CTDSP1-203ENST00000431127 CACNA1FO60840 1977 aa22.19■■□□□ 1.14
CTDSP1-203ENST00000431127 HSP90B1P14625 803 aaKnown RBP22.19■■□□□ 1.14
CTDSP1-203ENST00000431127 SOGA3Q5TF21 947 aa22.19■■□□□ 1.14
CTDSP1-203ENST00000431127 CWC25Q9NXE8 425 aaPredicted RBP22.19■■□□□ 1.14
CTDSP1-203ENST00000431127 CT47B1P0C2W7 299 aaPredicted RBP22.18■■□□□ 1.14
CTDSP1-203ENST00000431127 HOXA10P31260 410 aaPredicted RBP22.18■■□□□ 1.14
CTDSP1-203ENST00000431127 ZBTB38Q8NAP3 1195 aaPredicted RBP22.18■■□□□ 1.14
CTDSP1-203ENST00000431127 FAM89AQ96GI7 184 aa22.18■■□□□ 1.14
CTDSP1-203ENST00000431127 RBM17Q96I25 401 aaKnown RBP22.18■■□□□ 1.14
CTDSP1-203ENST00000431127 C21orf2O43822 256 aa22.17■■□□□ 1.14
CTDSP1-203ENST00000431127 HCLS1P14317 486 aaPredicted RBP22.17■■□□□ 1.14
CTDSP1-203ENST00000431127 SYNE4Q8N205 404 aa22.16■■□□□ 1.14
CTDSP1-203ENST00000431127 DNAAF4Q8WXU2 420 aa22.16■■□□□ 1.14
CTDSP1-203ENST00000431127 CRAMP1Q96RY5 1269 aa22.16■■□□□ 1.14
CTDSP1-203ENST00000431127 TNRC6CQ9HCJ0 1690 aaKnown RBP22.15■■□□□ 1.14
CTDSP1-203ENST00000431127 PCCAP05165 728 aaPredicted RBP22.15■■□□□ 1.14
CTDSP1-203ENST00000431127 IGKV5-2P06315 115 aa22.14■■□□□ 1.13
CTDSP1-203ENST00000431127 C3orf67Q6ZVT6 689 aa22.14■■□□□ 1.13
CTDSP1-203ENST00000431127 C7orf43Q8WVR3 580 aa22.14■■□□□ 1.13
CTDSP1-203ENST00000431127 ZNF219Q9P2Y4 722 aaPredicted RBP22.14■■□□□ 1.13
CTDSP1-203ENST00000431127 IRS4O14654 1257 aaPredicted RBP22.13■■□□□ 1.13
CTDSP1-203ENST00000431127 ALDH1L2Q3SY69 923 aa22.13■■□□□ 1.13
CTDSP1-203ENST00000431127 RTL5Q5HYW3 569 aaPredicted RBP22.13■■□□□ 1.13
CTDSP1-203ENST00000431127 LINS1Q8NG48 757 aa22.13■■□□□ 1.13
CTDSP1-203ENST00000431127 NEURL1BA8MQ27 555 aa22.12■■□□□ 1.13
CTDSP1-203ENST00000431127 KIF3CO14782 793 aa22.12■■□□□ 1.13
CTDSP1-203ENST00000431127 CCDC93Q567U6 631 aa22.12■■□□□ 1.13
CTDSP1-203ENST00000431127 MRPL50Q8N5N7 158 aaKnown RBP22.12■■□□□ 1.13
CTDSP1-203ENST00000431127 SLX4Q8IY92 1834 aa22.11■■□□□ 1.13
CTDSP1-203ENST00000431127 SF3B3Q15393 1217 aaKnown RBP22.11■■□□□ 1.13
CTDSP1-203ENST00000431127 CWF19L2Q2TBE0 894 aaKnown RBP22.11■■□□□ 1.13
CTDSP1-203ENST00000431127 CC2D2BQ6DHV5 1058 aa22.11■■□□□ 1.13
CTDSP1-203ENST00000431127 DDX46Q7L014 1031 aaKnown RBP22.11■■□□□ 1.13
CTDSP1-203ENST00000431127 SSH1Q8WYL5 1049 aa22.11■■□□□ 1.13
CTDSP1-203ENST00000431127 LMNB1P20700 586 aa22.1■■□□□ 1.13
CTDSP1-203ENST00000431127 GRIPAP1Q4V328 841 aa22.1■■□□□ 1.13
CTDSP1-203ENST00000431127 C9orf131Q5VYM1 1079 aa22.1■■□□□ 1.13
CTDSP1-203ENST00000431127 RTKN2Q8IZC4 609 aa22.1■■□□□ 1.13
CTDSP1-203ENST00000431127 TMX4Q9H1E5 349 aaPredicted RBP22.1■■□□□ 1.13
CTDSP1-203ENST00000431127 PTPRCP08575 1304 aa22.09■■□□□ 1.13
CTDSP1-203ENST00000431127 LTBP3Q9NS15 1303 aa22.09■■□□□ 1.13
CTDSP1-203ENST00000431127 NFKBIEO00221 500 aa22.09■■□□□ 1.13
CTDSP1-203ENST00000431127 BBOX1O75936 387 aa22.09■■□□□ 1.13
CTDSP1-203ENST00000431127 HSPA6P17066 643 aa22.09■■□□□ 1.13
CTDSP1-203ENST00000431127 RASSF7Q02833 373 aa22.09■■□□□ 1.13
CTDSP1-203ENST00000431127 GCKRQ14397 625 aa22.09■■□□□ 1.13
CTDSP1-203ENST00000431127 TAOK3Q9H2K8 898 aa22.09■■□□□ 1.13
CTDSP1-203ENST00000431127 ZBED9Q6R2W3 1325 aa22.08■■□□□ 1.13
CTDSP1-203ENST00000431127 CDHR2Q9BYE9 1310 aa22.08■■□□□ 1.13
CTDSP1-203ENST00000431127 F6X3S4 739 aa22.08■■□□□ 1.13
CTDSP1-203ENST00000431127 PPEF1O14829 653 aaPredicted RBP22.08■■□□□ 1.13
CTDSP1-203ENST00000431127 PDE8AO60658 829 aa22.08■■□□□ 1.13
CTDSP1-203ENST00000431127 SMC4Q9NTJ3 1288 aa22.08■■□□□ 1.13
CTDSP1-203ENST00000431127 RNF181Q9P0P0 153 aa22.08■■□□□ 1.13
CTDSP1-203ENST00000431127 ABCC4O15439 1325 aa22.07■■□□□ 1.12
CTDSP1-203ENST00000431127 H7C1W4 665 aa22.07■■□□□ 1.12
CTDSP1-203ENST00000431127 BEND3Q5T5X7 828 aa22.07■■□□□ 1.12
CTDSP1-203ENST00000431127 GRAPQ13588 217 aa22.06■■□□□ 1.12
CTDSP1-203ENST00000431127 TMC4Q7Z404 712 aa22.06■■□□□ 1.12
CTDSP1-203ENST00000431127 GRAPLQ8TC17 118 aaPredicted RBP22.06■■□□□ 1.12
CTDSP1-203ENST00000431127 BCL2L13Q9BXK5 485 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms