RNA–Protein interactions for RNA: ENST00000430350.2

PRNP-203, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,539 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-203ENST00000430350 ISCA1Q9BUE6 129 aa18.21■□□□□ 0.51
PRNP-203ENST00000430350 PA2G4Q9UQ80 394 aaKnown RBP18.21■□□□□ 0.51
PRNP-203ENST00000430350 MAP3K15Q6ZN16 1313 aa18.21■□□□□ 0.51
PRNP-203ENST00000430350 PALLDQ8WX93 1383 aa18.2■□□□□ 0.5
PRNP-203ENST00000430350 THSD7AQ9UPZ6 1657 aa18.2■□□□□ 0.5
PRNP-203ENST00000430350 KCNQ2O43526 872 aa18.2■□□□□ 0.5
PRNP-203ENST00000430350 XRCC6P12956 609 aaKnown RBP eCLIP18.2■□□□□ 0.5
PRNP-203ENST00000430350 SDSP20132 328 aa18.2■□□□□ 0.5
PRNP-203ENST00000430350 ATP6V1AP38606 617 aa18.2■□□□□ 0.5
PRNP-203ENST00000430350 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
PRNP-203ENST00000430350 MRE11P49959 708 aa18.2■□□□□ 0.5
PRNP-203ENST00000430350 SLKQ9H2G2 1235 aaPredicted RBP18.2■□□□□ 0.5
PRNP-203ENST00000430350 AFF2P51816 1311 aa18.2■□□□□ 0.5
PRNP-203ENST00000430350 TRIM28Q13263 835 aaKnown RBP18.2■□□□□ 0.5
PRNP-203ENST00000430350 GJD4Q96KN9 370 aaPredicted RBP18.2■□□□□ 0.5
PRNP-203ENST00000430350 AOX1Q06278 1338 aa18.2■□□□□ 0.5
PRNP-203ENST00000430350 G3BP1Q13283 466 aaKnown RBP eCLIP18.19■□□□□ 0.5
PRNP-203ENST00000430350 GIGYF2Q6Y7W6 1299 aaKnown RBP18.19■□□□□ 0.5
PRNP-203ENST00000430350 ARXQ96QS3 562 aa18.19■□□□□ 0.5
PRNP-203ENST00000430350 CICQ96RK0 1608 aaPredicted RBP18.19■□□□□ 0.5
PRNP-203ENST00000430350 DDX11L8A8MPP1 907 aa18.18■□□□□ 0.5
PRNP-203ENST00000430350 CLASRPQ8N2M8 674 aaKnown RBP18.18■□□□□ 0.5
PRNP-203ENST00000430350 C22orf23Q9BZE7 217 aa18.18■□□□□ 0.5
PRNP-203ENST00000430350 NUTM1Q86Y26 1132 aa18.17■□□□□ 0.5
PRNP-203ENST00000430350 GLIPR1L2Q4G1C9 344 aa18.17■□□□□ 0.5
PRNP-203ENST00000430350 HSP90AB3PQ58FF7 597 aa18.17■□□□□ 0.5
PRNP-203ENST00000430350 TSHZ3Q63HK5 1081 aa18.17■□□□□ 0.5
PRNP-203ENST00000430350 COPRSQ9NQ92 184 aa18.17■□□□□ 0.5
PRNP-203ENST00000430350 CCDC87Q9NVE4 849 aa18.17■□□□□ 0.5
PRNP-203ENST00000430350 PTMSP20962 102 aa18.16■□□□□ 0.5
PRNP-203ENST00000430350 FOXO4P98177 505 aa18.16■□□□□ 0.5
PRNP-203ENST00000430350 TRPC5Q9UL62 973 aaPredicted RBP18.16■□□□□ 0.5
PRNP-203ENST00000430350 ERVV-1B6SEH8 477 aa18.16■□□□□ 0.5
PRNP-203ENST00000430350 CRKLP46109 303 aaKnown RBP18.16■□□□□ 0.5
PRNP-203ENST00000430350 RFX5P48382 616 aaPredicted RBP18.16■□□□□ 0.5
PRNP-203ENST00000430350 INTS5Q6P9B9 1019 aaKnown RBP18.16■□□□□ 0.5
PRNP-203ENST00000430350 CASC1Q6TDU7 716 aa18.16■□□□□ 0.5
PRNP-203ENST00000430350 ATRNO75882 1429 aa18.16■□□□□ 0.5
PRNP-203ENST00000430350 EIF5P55010 431 aaKnown RBP18.15■□□□□ 0.5
PRNP-203ENST00000430350 ITPK1Q13572 414 aa18.15■□□□□ 0.5
PRNP-203ENST00000430350 LMBR1LQ6UX01 489 aa18.15■□□□□ 0.5
PRNP-203ENST00000430350 DZIP3Q86Y13 1208 aaKnown RBP18.15■□□□□ 0.5
PRNP-203ENST00000430350 SASH1O94885 1247 aa18.15■□□□□ 0.5
PRNP-203ENST00000430350 HLFQ16534 295 aa18.15■□□□□ 0.5
PRNP-203ENST00000430350 CIZ1Q9ULV3 898 aaPredicted RBP18.15■□□□□ 0.5
PRNP-203ENST00000430350 ONECUT3O60422 494 aaPredicted RBP18.14■□□□□ 0.49
PRNP-203ENST00000430350 PTPN12Q05209 780 aaKnown RBP18.14■□□□□ 0.49
PRNP-203ENST00000430350 KLHDC4Q8TBB5 520 aa18.14■□□□□ 0.49
PRNP-203ENST00000430350 SIL1Q9H173 461 aa18.14■□□□□ 0.49
PRNP-203ENST00000430350 USP42Q9H9J4 1324 aaKnown RBP18.14■□□□□ 0.49
PRNP-203ENST00000430350 ZNF831Q5JPB2 1677 aa18.14■□□□□ 0.49
PRNP-203ENST00000430350 PCCAP05165 728 aaPredicted RBP18.14■□□□□ 0.49
PRNP-203ENST00000430350 DDIT3P35638 169 aa18.14■□□□□ 0.49
PRNP-203ENST00000430350 TUBGCP6Q96RT7 1819 aa18.14■□□□□ 0.49
PRNP-203ENST00000430350 RREB1Q92766 1687 aa18.13■□□□□ 0.49
PRNP-203ENST00000430350 TTC41PQ6P2S7 1318 aa18.13■□□□□ 0.49
PRNP-203ENST00000430350 SNX21Q969T3 373 aa18.13■□□□□ 0.49
PRNP-203ENST00000430350 RBM25P49756 843 aaKnown RBP18.13■□□□□ 0.49
PRNP-203ENST00000430350 ZBTB38Q8NAP3 1195 aaPredicted RBP18.13■□□□□ 0.49
PRNP-203ENST00000430350 TBC1D2BQ9UPU7 963 aa18.13■□□□□ 0.49
PRNP-203ENST00000430350 RRP9O43818 475 aaKnown RBP18.12■□□□□ 0.49
PRNP-203ENST00000430350 TRAK2O60296 914 aa18.12■□□□□ 0.49
PRNP-203ENST00000430350 IFIT2P09913 472 aaKnown RBP18.12■□□□□ 0.49
PRNP-203ENST00000430350 PI4K2BQ8TCG2 481 aa18.12■□□□□ 0.49
PRNP-203ENST00000430350 NLRP10Q86W26 655 aa18.12■□□□□ 0.49
PRNP-203ENST00000430350 ANKRD36CQ5JPF3 1778 aa18.11■□□□□ 0.49
PRNP-203ENST00000430350 TRIM6-TRIM34B2RNG4 842 aa18.11■□□□□ 0.49
PRNP-203ENST00000430350 AACSQ86V21 672 aa18.11■□□□□ 0.49
PRNP-203ENST00000430350 CHMP3Q9Y3E7 222 aa18.11■□□□□ 0.49
PRNP-203ENST00000430350 GPATCH3Q96I76 525 aa18.11■□□□□ 0.49
PRNP-203ENST00000430350 NUP98P52948 1817 aa18.1■□□□□ 0.49
PRNP-203ENST00000430350 ERC2O15083 957 aa18.1■□□□□ 0.49
PRNP-203ENST00000430350 GPTP24298 496 aa18.1■□□□□ 0.49
PRNP-203ENST00000430350 RILPL2Q969X0 211 aa18.1■□□□□ 0.49
PRNP-203ENST00000430350 FAM89AQ96GI7 184 aa18.1■□□□□ 0.49
PRNP-203ENST00000430350 PLA2G12BQ9BX93 195 aa18.1■□□□□ 0.49
PRNP-203ENST00000430350 NHSQ6T4R5 1651 aa18.1■□□□□ 0.49
PRNP-203ENST00000430350 COL5A3P25940 1745 aaPredicted RBP18.1■□□□□ 0.49
PRNP-203ENST00000430350 GLRX3O76003 335 aaKnown RBP18.1■□□□□ 0.49
PRNP-203ENST00000430350 EAF2Q96CJ1 260 aaPredicted RBP18.1■□□□□ 0.49
PRNP-203ENST00000430350 ECHDC1Q9NTX5 307 aa18.1■□□□□ 0.49
PRNP-203ENST00000430350 MYH14Q7Z406 1995 aaKnown RBP18.1■□□□□ 0.49
PRNP-203ENST00000430350 PTF1AQ7RTS3 328 aa18.09■□□□□ 0.49
PRNP-203ENST00000430350 SEPT12Q8IYM1 358 aa18.09■□□□□ 0.49
PRNP-203ENST00000430350 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.09■□□□□ 0.49
PRNP-203ENST00000430350 CDHR2Q9BYE9 1310 aa18.09■□□□□ 0.49
PRNP-203ENST00000430350 QTRT2Q9H974 415 aaKnown RBP18.09■□□□□ 0.49
PRNP-203ENST00000430350 FAM182BQ5T319 152 aa18.08■□□□□ 0.49
PRNP-203ENST00000430350 ZNF34Q8IZ26 560 aa18.08■□□□□ 0.49
PRNP-203ENST00000430350 SKOR2Q2VWA4 1001 aaPredicted RBP18.08■□□□□ 0.48
PRNP-203ENST00000430350 BTAF1O14981 1849 aa18.08■□□□□ 0.48
PRNP-203ENST00000430350 HSCBQ8IWL3 235 aa18.07■□□□□ 0.48
PRNP-203ENST00000430350 LINC00116Q8NCU8 138 aa18.07■□□□□ 0.48
PRNP-203ENST00000430350 GRPEL1Q9HAV7 217 aa18.07■□□□□ 0.48
PRNP-203ENST00000430350 CAMTA2O94983 1202 aa18.06■□□□□ 0.48
PRNP-203ENST00000430350 REC8O95072 547 aa18.06■□□□□ 0.48
PRNP-203ENST00000430350 TFCP2Q12800 502 aa18.06■□□□□ 0.48
PRNP-203ENST00000430350 CNTROBQ8N137 903 aa18.06■□□□□ 0.48
PRNP-203ENST00000430350 CCDC8Q9H0W5 538 aaPredicted RBP18.06■□□□□ 0.48
PRNP-203ENST00000430350 TRMT112Q9UI30 125 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms