RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 USPL1Q5W0Q7 1092 aa21.5■■□□□ 1.03
LINC00887-203ENST00000429578 FHDC1Q9C0D6 1143 aaPredicted RBP21.5■■□□□ 1.03
LINC00887-203ENST00000429578 CCDC191Q8NCU4 936 aa21.49■■□□□ 1.03
LINC00887-203ENST00000429578 USP44Q9H0E7 712 aa21.49■■□□□ 1.03
LINC00887-203ENST00000429578 ZBTB40Q9NUA8 1239 aa21.49■■□□□ 1.03
LINC00887-203ENST00000429578 SRP68Q9UHB9 627 aaKnown RBP21.49■■□□□ 1.03
LINC00887-203ENST00000429578 GCKRQ14397 625 aa21.49■■□□□ 1.03
LINC00887-203ENST00000429578 ZNF34Q8IZ26 560 aa21.49■■□□□ 1.03
LINC00887-203ENST00000429578 MEIS3Q99687 375 aa21.49■■□□□ 1.03
LINC00887-203ENST00000429578 BCL2L12Q9HB09 334 aa21.49■■□□□ 1.03
LINC00887-203ENST00000429578 COL24A1Q17RW2 1714 aa21.48■■□□□ 1.03
LINC00887-203ENST00000429578 SYT17Q9BSW7 474 aa21.48■■□□□ 1.03
LINC00887-203ENST00000429578 MSH5O43196 834 aa21.47■■□□□ 1.03
LINC00887-203ENST00000429578 GNAI3P08754 354 aa21.47■■□□□ 1.03
LINC00887-203ENST00000429578 CWC25Q9NXE8 425 aaPredicted RBP21.47■■□□□ 1.03
LINC00887-203ENST00000429578 C9orf78Q9NZ63 289 aaPredicted RBP21.47■■□□□ 1.03
LINC00887-203ENST00000429578 GRM8O00222 908 aa21.46■■□□□ 1.03
LINC00887-203ENST00000429578 POLD1P28340 1107 aa21.46■■□□□ 1.03
LINC00887-203ENST00000429578 COL23A1Q86Y22 540 aaPredicted RBP21.46■■□□□ 1.03
LINC00887-203ENST00000429578 MYH3P11055 1940 aa21.46■■□□□ 1.03
LINC00887-203ENST00000429578 UTYO14607 1347 aa21.46■■□□□ 1.03
LINC00887-203ENST00000429578 GPTP24298 496 aa21.46■■□□□ 1.03
LINC00887-203ENST00000429578 NLRP10Q86W26 655 aa21.46■■□□□ 1.03
LINC00887-203ENST00000429578 NBPF7P0C2Y1 421 aaPredicted RBP21.45■■□□□ 1.02
LINC00887-203ENST00000429578 UBN2Q6ZU65 1347 aa21.44■■□□□ 1.02
LINC00887-203ENST00000429578 GYS1P13807 737 aa21.44■■□□□ 1.02
LINC00887-203ENST00000429578 NIP7Q9Y221 180 aaKnown RBP eCLIP21.44■■□□□ 1.02
LINC00887-203ENST00000429578 UBTFL1P0CB47 393 aaPredicted RBP21.43■■□□□ 1.02
LINC00887-203ENST00000429578 PARP10Q53GL7 1025 aa21.43■■□□□ 1.02
LINC00887-203ENST00000429578 TBC1D9BQ66K14 1250 aa21.43■■□□□ 1.02
LINC00887-203ENST00000429578 LAMB2P55268 1798 aa21.42■■□□□ 1.02
LINC00887-203ENST00000429578 H7C1W4 665 aa21.42■■□□□ 1.02
LINC00887-203ENST00000429578 HDAC5Q9UQL6 1122 aa21.42■■□□□ 1.02
LINC00887-203ENST00000429578 GNAI2P04899 355 aa21.41■■□□□ 1.02
LINC00887-203ENST00000429578 UBE3BQ7Z3V4 1068 aa21.41■■□□□ 1.02
LINC00887-203ENST00000429578 KLHL34Q8N239 644 aa21.41■■□□□ 1.02
LINC00887-203ENST00000429578 YY1P25490 414 aa21.41■■□□□ 1.02
LINC00887-203ENST00000429578 ZBTB38Q8NAP3 1195 aaPredicted RBP21.41■■□□□ 1.02
LINC00887-203ENST00000429578 SETDB2Q96T68 719 aa21.41■■□□□ 1.02
LINC00887-203ENST00000429578 C1orf115Q9H7X2 142 aa21.41■■□□□ 1.02
LINC00887-203ENST00000429578 PPP4R2Q9NY27 417 aa21.41■■□□□ 1.02
LINC00887-203ENST00000429578 DDX60Q8IY21 1712 aaKnown RBP21.4■■□□□ 1.02
LINC00887-203ENST00000429578 PCCAP05165 728 aaPredicted RBP21.4■■□□□ 1.02
LINC00887-203ENST00000429578 CASP7P55210 303 aa21.4■■□□□ 1.02
LINC00887-203ENST00000429578 SUSD4Q5VX71 490 aa21.4■■□□□ 1.02
LINC00887-203ENST00000429578 BICDL1Q6ZP65 573 aa21.4■■□□□ 1.02
LINC00887-203ENST00000429578 PPP1R42Q7Z4L9 355 aa21.4■■□□□ 1.02
LINC00887-203ENST00000429578 PCDHB15Q9Y5E8 787 aa21.39■■□□□ 1.01
LINC00887-203ENST00000429578 LRRFIP2Q9Y608 721 aaKnown RBP21.39■■□□□ 1.01
LINC00887-203ENST00000429578 NLGN1Q8N2Q7 840 aa21.38■■□□□ 1.01
LINC00887-203ENST00000429578 UTP14AQ9BVJ6 771 aaKnown RBP21.38■■□□□ 1.01
LINC00887-203ENST00000429578 TRMT112Q9UI30 125 aaKnown RBP21.38■■□□□ 1.01
LINC00887-203ENST00000429578 CARMIL3Q8ND23 1372 aa21.38■■□□□ 1.01
LINC00887-203ENST00000429578 NFIXQ14938 502 aa21.38■■□□□ 1.01
LINC00887-203ENST00000429578 MSL1Q68DK7 614 aa21.38■■□□□ 1.01
LINC00887-203ENST00000429578 JARID2Q92833 1246 aaPredicted RBP21.38■■□□□ 1.01
LINC00887-203ENST00000429578 FAM89AQ96GI7 184 aa21.38■■□□□ 1.01
LINC00887-203ENST00000429578 NTSR2O95665 410 aa21.37■■□□□ 1.01
LINC00887-203ENST00000429578 RTL5Q5HYW3 569 aaPredicted RBP21.37■■□□□ 1.01
LINC00887-203ENST00000429578 CDHR2Q9BYE9 1310 aa21.37■■□□□ 1.01
LINC00887-203ENST00000429578 TM4SF1P30408 202 aa21.36■■□□□ 1.01
LINC00887-203ENST00000429578 KAZALD1Q96I82 304 aa21.36■■□□□ 1.01
LINC00887-203ENST00000429578 SUCLG2Q96I99 432 aa21.36■■□□□ 1.01
LINC00887-203ENST00000429578 NRXN2Q9P2S2 1712 aa21.36■■□□□ 1.01
LINC00887-203ENST00000429578 FAM177BA6PVY3 158 aa21.35■■□□□ 1.01
LINC00887-203ENST00000429578 RPAP2Q8IXW5 612 aaPredicted RBP21.35■■□□□ 1.01
LINC00887-203ENST00000429578 NYXQ9GZU5 481 aa21.35■■□□□ 1.01
LINC00887-203ENST00000429578 SH3TC1Q8TE82 1336 aa21.35■■□□□ 1.01
LINC00887-203ENST00000429578 CEP85Q6P2H3 762 aa21.35■■□□□ 1.01
LINC00887-203ENST00000429578 CCDC136Q96JN2 1154 aa21.34■■□□□ 1.01
LINC00887-203ENST00000429578 TPTE2Q6XPS3 522 aa21.33■■□□□ 1.01
LINC00887-203ENST00000429578 NBPF5PQ86XG9 351 aaPredicted RBP21.33■■□□□ 1.01
LINC00887-203ENST00000429578 SYNE4Q8N205 404 aa21.33■■□□□ 1.01
LINC00887-203ENST00000429578 ANKRD44Q8N8A2 993 aa21.33■■□□□ 1.01
LINC00887-203ENST00000429578 PLA2G12BQ9BX93 195 aa21.33■■□□□ 1.01
LINC00887-203ENST00000429578 BICC1Q9H694 974 aaKnown RBP21.33■■□□□ 1.01
LINC00887-203ENST00000429578 IRS4O14654 1257 aaPredicted RBP21.32■■□□□ 1
LINC00887-203ENST00000429578 MTX1Q13505 466 aa21.32■■□□□ 1
LINC00887-203ENST00000429578 EPHA10Q5JZY3 1008 aa21.32■■□□□ 1
LINC00887-203ENST00000429578 NUTM1Q86Y26 1132 aa21.32■■□□□ 1
LINC00887-203ENST00000429578 SIRT2Q8IXJ6 389 aa21.32■■□□□ 1
LINC00887-203ENST00000429578 UTRNP46939 3433 aa21.31■■□□□ 1
LINC00887-203ENST00000429578 HSP90B1P14625 803 aaKnown RBP21.31■■□□□ 1
LINC00887-203ENST00000429578 FOXO4P98177 505 aa21.31■■□□□ 1
LINC00887-203ENST00000429578 ATP8B2P98198 1209 aa21.31■■□□□ 1
LINC00887-203ENST00000429578 DDR1Q08345 913 aa21.31■■□□□ 1
LINC00887-203ENST00000429578 HDAC1Q13547 482 aaPredicted RBP21.31■■□□□ 1
LINC00887-203ENST00000429578 RABL6Q3YEC7 729 aaPredicted RBP21.31■■□□□ 1
LINC00887-203ENST00000429578 B4GALNT3Q6L9W6 998 aa21.31■■□□□ 1
LINC00887-203ENST00000429578 POLRMTO00411 1230 aaKnown RBP21.3■■□□□ 1
LINC00887-203ENST00000429578 SERPINB2P05120 415 aa21.3■■□□□ 1
LINC00887-203ENST00000429578 GTF2E1P29083 439 aaPredicted RBP21.3■■□□□ 1
LINC00887-203ENST00000429578 GPR162Q16538 588 aa21.3■■□□□ 1
LINC00887-203ENST00000429578 NLGN2Q8NFZ4 835 aa21.3■■□□□ 1
LINC00887-203ENST00000429578 PDE8AO60658 829 aa21.29■■□□□ 1
LINC00887-203ENST00000429578 ERFEQ4G0M1 354 aa21.29■■□□□ 1
LINC00887-203ENST00000429578 RWDD1Q9H446 243 aaPredicted RBP21.29■■□□□ 1
LINC00887-203ENST00000429578 PNMA6EA0A0J9YXQ4 647 aa21.29■■□□□ 1
LINC00887-203ENST00000429578 MMP10P09238 476 aa21.29■■□□□ 1
LINC00887-203ENST00000429578 SLC10A5Q5PT55 438 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms