RNA–Protein interactions for RNA: ENST00000429199.6

PGAP3-204, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-204ENST00000429199 DICER1Q9UPY3 1922 aaKnown RBP27.73■■■□□ 2.03
PGAP3-204ENST00000429199 DBF4Q9UBU7 674 aaPredicted RBP27.72■■■□□ 2.03
PGAP3-204ENST00000429199 LAMB2P55268 1798 aa27.72■■■□□ 2.03
PGAP3-204ENST00000429199 PARP10Q53GL7 1025 aa27.71■■■□□ 2.03
PGAP3-204ENST00000429199 NLRP10Q86W26 655 aa27.71■■■□□ 2.03
PGAP3-204ENST00000429199 TSPYL6Q8N831 410 aa27.71■■■□□ 2.03
PGAP3-204ENST00000429199 ZNF428Q96B54 188 aa27.71■■■□□ 2.03
PGAP3-204ENST00000429199 LTBP3Q9NS15 1303 aa27.7■■■□□ 2.03
PGAP3-204ENST00000429199 SYNE4Q8N205 404 aa27.7■■■□□ 2.02
PGAP3-204ENST00000429199 TCIRG1Q13488 830 aa27.69■■■□□ 2.02
PGAP3-204ENST00000429199 ZC3H4Q9UPT8 1303 aaKnown RBP27.68■■■□□ 2.02
PGAP3-204ENST00000429199 PLBD2Q8NHP8 589 aa27.68■■■□□ 2.02
PGAP3-204ENST00000429199 UTP14AQ9BVJ6 771 aaKnown RBP27.68■■■□□ 2.02
PGAP3-204ENST00000429199 TAOK3Q9H2K8 898 aa27.68■■■□□ 2.02
PGAP3-204ENST00000429199 PPP1R42Q7Z4L9 355 aa27.67■■■□□ 2.02
PGAP3-204ENST00000429199 PHAXQ9H814 394 aaKnown RBP27.67■■■□□ 2.02
PGAP3-204ENST00000429199 DDX60Q8IY21 1712 aaKnown RBP27.67■■■□□ 2.02
PGAP3-204ENST00000429199 HOXA10P31260 410 aaPredicted RBP27.66■■■□□ 2.02
PGAP3-204ENST00000429199 HYPKQ9NX55 129 aa27.66■■■□□ 2.02
PGAP3-204ENST00000429199 CCDC93Q567U6 631 aa27.65■■■□□ 2.02
PGAP3-204ENST00000429199 HSP90AB3PQ58FF7 597 aa27.65■■■□□ 2.02
PGAP3-204ENST00000429199 ANKRD13DQ6ZTN6 518 aa27.65■■■□□ 2.02
PGAP3-204ENST00000429199 SLC10A5Q5PT55 438 aa27.64■■■□□ 2.02
PGAP3-204ENST00000429199 SOGA3Q5TF21 947 aa27.64■■■□□ 2.02
PGAP3-204ENST00000429199 ISCA1Q9BUE6 129 aa27.64■■■□□ 2.02
PGAP3-204ENST00000429199 NCBP3Q53F19 620 aaKnown RBP27.63■■■□□ 2.01
PGAP3-204ENST00000429199 SALL2Q9Y467 1007 aaPredicted RBP27.63■■■□□ 2.01
PGAP3-204ENST00000429199 IL16Q14005 1332 aa27.63■■■□□ 2.01
PGAP3-204ENST00000429199 RNF123Q5XPI4 1314 aa27.63■■■□□ 2.01
PGAP3-204ENST00000429199 KDM2BQ8NHM5 1336 aa27.63■■■□□ 2.01
PGAP3-204ENST00000429199 ATP5J2-PTCD1G3V325 749 aa27.62■■■□□ 2.01
PGAP3-204ENST00000429199 HCLS1P14317 486 aaPredicted RBP27.62■■■□□ 2.01
PGAP3-204ENST00000429199 ALDH1B1P30837 517 aa27.62■■■□□ 2.01
PGAP3-204ENST00000429199 RPGRQ92834 1020 aaKnown RBP27.62■■■□□ 2.01
PGAP3-204ENST00000429199 COL4A1P02462 1669 aa27.62■■■□□ 2.01
PGAP3-204ENST00000429199 FAM9BQ8IZU0 186 aa27.61■■■□□ 2.01
PGAP3-204ENST00000429199 COL4A5P29400 1685 aa27.61■■■□□ 2.01
PGAP3-204ENST00000429199 GLTPD2A6NH11 291 aa27.6■■■□□ 2.01
PGAP3-204ENST00000429199 FKBP4Q02790 459 aaKnown RBP eCLIP27.6■■■□□ 2.01
PGAP3-204ENST00000429199 CRAMP1Q96RY5 1269 aa27.6■■■□□ 2.01
PGAP3-204ENST00000429199 RRAGCQ9HB90 399 aa27.6■■■□□ 2.01
PGAP3-204ENST00000429199 ZNF277Q9NRM2 450 aaPredicted RBP27.6■■■□□ 2.01
PGAP3-204ENST00000429199 TRMT112Q9UI30 125 aaKnown RBP27.6■■■□□ 2.01
PGAP3-204ENST00000429199 FANCIQ9NVI1 1328 aa27.6■■■□□ 2.01
PGAP3-204ENST00000429199 WDR90Q96KV7 1748 aa27.59■■■□□ 2.01
PGAP3-204ENST00000429199 SPINK5Q9NQ38 1064 aaPredicted RBP27.59■■■□□ 2.01
PGAP3-204ENST00000429199 TAF1P21675 1872 aa27.59■■■□□ 2.01
PGAP3-204ENST00000429199 TCERG1O14776 1098 aaKnown RBP27.58■■■□□ 2.01
PGAP3-204ENST00000429199 NLRP3Q96P20 1036 aa27.58■■■□□ 2.01
PGAP3-204ENST00000429199 ABCC4O15439 1325 aa27.58■■■□□ 2.01
PGAP3-204ENST00000429199 SH3TC1Q8TE82 1336 aa27.58■■■□□ 2.01
PGAP3-204ENST00000429199 TOMM70O94826 608 aa27.57■■■□□ 2
PGAP3-204ENST00000429199 RBM17Q96I25 401 aaKnown RBP27.57■■■□□ 2
PGAP3-204ENST00000429199 POTECB2RU33 542 aa27.56■■■□□ 2
PGAP3-204ENST00000429199 PPEF1O14829 653 aaPredicted RBP27.56■■■□□ 2
PGAP3-204ENST00000429199 CCDC30Q5VVM6 783 aa27.56■■■□□ 2
PGAP3-204ENST00000429199 RTKN2Q8IZC4 609 aa27.56■■■□□ 2
PGAP3-204ENST00000429199 GOLGA2Q08379 1002 aa27.55■■■□□ 2
PGAP3-204ENST00000429199 TWISTNBQ3B726 338 aaPredicted RBP27.55■■■□□ 2
PGAP3-204ENST00000429199 FAM89AQ96GI7 184 aa27.55■■■□□ 2
PGAP3-204ENST00000429199 TRIM28Q13263 835 aaKnown RBP27.54■■■□□ 2
PGAP3-204ENST00000429199 ZNF541Q9H0D2 1346 aa27.53■■■□□ 2
PGAP3-204ENST00000429199 RIC3Q7Z5B4 369 aa27.53■■■□□ 2
PGAP3-204ENST00000429199 WDR63Q8IWG1 891 aa27.53■■■□□ 2
PGAP3-204ENST00000429199 PSMD1Q99460 953 aa27.53■■■□□ 2
PGAP3-204ENST00000429199 HSPA6P17066 643 aa27.52■■■□□ 2
PGAP3-204ENST00000429199 RTL5Q5HYW3 569 aaPredicted RBP27.52■■■□□ 2
PGAP3-204ENST00000429199 G2E3Q7L622 706 aa27.52■■■□□ 2
PGAP3-204ENST00000429199 MYD88Q99836 296 aa27.52■■■□□ 2
PGAP3-204ENST00000429199 LRRC37AA6NMS7 1700 aa27.51■■□□□ 1.99
PGAP3-204ENST00000429199 DDNO94850 711 aaPredicted RBP27.51■■□□□ 1.99
PGAP3-204ENST00000429199 RBM46Q8TBY0 533 aaKnown RBP27.51■■□□□ 1.99
PGAP3-204ENST00000429199 IARSP41252 1262 aaKnown RBP27.5■■□□□ 1.99
PGAP3-204ENST00000429199 ZNF521Q96K83 1311 aa27.49■■□□□ 1.99
PGAP3-204ENST00000429199 DUOX1Q9NRD9 1551 aa27.49■■□□□ 1.99
PGAP3-204ENST00000429199 ATP6V0A2Q9Y487 856 aa27.49■■□□□ 1.99
PGAP3-204ENST00000429199 EXOSC9Q06265 439 aaKnown RBP27.48■■□□□ 1.99
PGAP3-204ENST00000429199 CC2D2BQ6DHV5 1058 aa27.48■■□□□ 1.99
PGAP3-204ENST00000429199 METTL22Q9BUU2 404 aaPredicted RBP27.48■■□□□ 1.99
PGAP3-204ENST00000429199 MAP3K2Q9Y2U5 619 aa27.48■■□□□ 1.99
PGAP3-204ENST00000429199 VEGFAP15692 232 aaPredicted RBP27.47■■□□□ 1.99
PGAP3-204ENST00000429199 PI4KAP2A4QPH2 592 aa27.46■■□□□ 1.99
PGAP3-204ENST00000429199 IRS4O14654 1257 aaPredicted RBP27.46■■□□□ 1.99
PGAP3-204ENST00000429199 VAMP4O75379 141 aa27.46■■□□□ 1.99
PGAP3-204ENST00000429199 IGKV5-2P06315 115 aa27.46■■□□□ 1.99
PGAP3-204ENST00000429199 GRAPQ13588 217 aa27.46■■□□□ 1.99
PGAP3-204ENST00000429199 DPY19L2Q6NUT2 758 aa27.46■■□□□ 1.99
PGAP3-204ENST00000429199 C16orf71Q8IYS4 520 aaPredicted RBP27.46■■□□□ 1.99
PGAP3-204ENST00000429199 PI4KAP1Q8N8J0 262 aa27.46■■□□□ 1.99
PGAP3-204ENST00000429199 GRAPLQ8TC17 118 aaPredicted RBP27.46■■□□□ 1.99
PGAP3-204ENST00000429199 JARID2Q92833 1246 aaPredicted RBP27.46■■□□□ 1.99
PGAP3-204ENST00000429199 SF3B3Q15393 1217 aaKnown RBP27.45■■□□□ 1.98
PGAP3-204ENST00000429199 ZBTB38Q8NAP3 1195 aaPredicted RBP27.45■■□□□ 1.98
PGAP3-204ENST00000429199 STK31Q9BXU1 1019 aa27.45■■□□□ 1.98
PGAP3-204ENST00000429199 FZD9O00144 591 aa27.44■■□□□ 1.98
PGAP3-204ENST00000429199 DDX58O95786 925 aaKnown RBP27.44■■□□□ 1.98
PGAP3-204ENST00000429199 SLC4A2P04920 1241 aa27.44■■□□□ 1.98
PGAP3-204ENST00000429199 KSR2Q6VAB6 950 aa27.44■■□□□ 1.98
PGAP3-204ENST00000429199 DDX46Q7L014 1031 aaKnown RBP27.44■■□□□ 1.98
PGAP3-204ENST00000429199 CCDC191Q8NCU4 936 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms