RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 LARP6Q9BRS8 491 aaKnown RBP10.53□□□□□ -0.72
CDH13-202ENST00000428848 CHPF2Q9P2E5 772 aa10.53□□□□□ -0.72
CDH13-202ENST00000428848 AP5Z1O43299 807 aa10.52□□□□□ -0.72
CDH13-202ENST00000428848 FIBPO43427 364 aa10.52□□□□□ -0.72
CDH13-202ENST00000428848 DNM1Q05193 864 aaKnown RBP10.52□□□□□ -0.72
CDH13-202ENST00000428848 AKAP4Q5JQC9 854 aa10.52□□□□□ -0.72
CDH13-202ENST00000428848 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.72
CDH13-202ENST00000428848 ZNF710Q8N1W2 664 aa10.52□□□□□ -0.72
CDH13-202ENST00000428848 TTC12Q9H892 705 aaPredicted RBP10.52□□□□□ -0.72
CDH13-202ENST00000428848 ECHDC1Q9NTX5 307 aa10.52□□□□□ -0.72
CDH13-202ENST00000428848 PDRG1Q9NUG6 133 aa10.52□□□□□ -0.72
CDH13-202ENST00000428848 RGPD2P0DJD1 1756 aa10.52□□□□□ -0.73
CDH13-202ENST00000428848 GCP02774 474 aa10.52□□□□□ -0.73
CDH13-202ENST00000428848 ATF3P18847 181 aa10.52□□□□□ -0.73
CDH13-202ENST00000428848 EIF2S2P20042 333 aaKnown RBP10.52□□□□□ -0.73
CDH13-202ENST00000428848 C1orf141Q5JVX7 400 aa10.52□□□□□ -0.73
CDH13-202ENST00000428848 GIMAP6Q6P9H5 292 aa10.52□□□□□ -0.73
CDH13-202ENST00000428848 CCDC83Q8IWF9 413 aa10.52□□□□□ -0.73
CDH13-202ENST00000428848 RBM33Q96EV2 1170 aaKnown RBP10.52□□□□□ -0.73
CDH13-202ENST00000428848 LGR6Q9HBX8 967 aa10.52□□□□□ -0.73
CDH13-202ENST00000428848 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.73
CDH13-202ENST00000428848 MST1RQ04912 1400 aa10.52□□□□□ -0.73
CDH13-202ENST00000428848 NCAPD2Q15021 1401 aa10.52□□□□□ -0.73
CDH13-202ENST00000428848 SLIT3O75094 1523 aa10.51□□□□□ -0.73
CDH13-202ENST00000428848 OVOS2A0A0G2JMS6 1433 aa10.51□□□□□ -0.73
CDH13-202ENST00000428848 DCCP43146 1447 aa10.51□□□□□ -0.73
CDH13-202ENST00000428848 KCNQ3O43525 872 aa10.51□□□□□ -0.73
CDH13-202ENST00000428848 ALDH1L1O75891 902 aa10.51□□□□□ -0.73
CDH13-202ENST00000428848 TEFQ10587 303 aa10.51□□□□□ -0.73
CDH13-202ENST00000428848 ME3Q16798 604 aa10.51□□□□□ -0.73
CDH13-202ENST00000428848 PRPF40BQ6NWY9 871 aaKnown RBP10.51□□□□□ -0.73
CDH13-202ENST00000428848 CLASRPQ8N2M8 674 aaKnown RBP10.51□□□□□ -0.73
CDH13-202ENST00000428848 JAKMIP1Q96N16 626 aaKnown RBP10.51□□□□□ -0.73
CDH13-202ENST00000428848 CYP46A1Q9Y6A2 500 aa10.51□□□□□ -0.73
CDH13-202ENST00000428848 CCDC171Q6TFL3 1326 aa10.51□□□□□ -0.73
CDH13-202ENST00000428848 HEG1Q9ULI3 1381 aa10.51□□□□□ -0.73
CDH13-202ENST00000428848 KRT28Q7Z3Y7 464 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 ARHGEF25Q86VW2 580 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 USHBP1Q8N6Y0 703 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 MAP4K1Q92918 833 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 EVI5LQ96CN4 794 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 HDAC5Q9UQL6 1122 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 ELP1O95163 1332 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 TRPM3Q9HCF6 1732 aaPredicted RBP10.5□□□□□ -0.73
CDH13-202ENST00000428848 ERC1Q8IUD2 1116 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 MPNDQ8N594 471 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 KIAA1524Q8TCG1 905 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 ALDH8A1Q9H2A2 487 aaPredicted RBP10.5□□□□□ -0.73
CDH13-202ENST00000428848 KCNF1Q9H3M0 494 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 KIF3AQ9Y496 699 aa10.5□□□□□ -0.73
CDH13-202ENST00000428848 ZBTB7CA1YPR0 619 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 TPM3P06753 285 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 CBX1P83916 185 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 NBPF6Q5VWK0 638 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 CREB3L3Q68CJ9 461 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 LMOD2Q6P5Q4 547 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 TTC6Q86TZ1 520 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 NBPF4Q96M43 638 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 TPCN1Q9ULQ1 816 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 UTYO14607 1347 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 PLEKHG2Q9H7P9 1386 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 JCADQ9P266 1359 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 SIPA1L3O60292 1781 aaPredicted RBP10.49□□□□□ -0.73
CDH13-202ENST00000428848 DNTTIP2Q5QJE6 756 aaKnown RBP10.49□□□□□ -0.73
CDH13-202ENST00000428848 ZNF530Q6P9A1 599 aaPredicted RBP10.49□□□□□ -0.73
CDH13-202ENST00000428848 C17orf53Q8N3J3 647 aaPredicted RBP10.49□□□□□ -0.73
CDH13-202ENST00000428848 RBM8AQ9Y5S9 174 aaKnown RBP10.49□□□□□ -0.73
CDH13-202ENST00000428848 TMEM94Q12767 1356 aa10.49□□□□□ -0.73
CDH13-202ENST00000428848 C1orf167Q5SNV9 1468 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 CAMTA1Q9Y6Y1 1673 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 ANXA1P04083 346 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 CADPS2Q86UW7 1296 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 GPATCH3Q96I76 525 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 ORAI2Q96SN7 254 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 DBF4Q9UBU7 674 aaPredicted RBP10.48□□□□□ -0.73
CDH13-202ENST00000428848 HIP1O00291 1037 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 SOCS7O14512 581 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 SASH1O94885 1247 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 CCDC192P0DO97 292 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 ZKSCAN1P17029 563 aaPredicted RBP10.48□□□□□ -0.73
CDH13-202ENST00000428848 OS9Q13438 667 aaPredicted RBP10.48□□□□□ -0.73
CDH13-202ENST00000428848 COL9A3Q14050 684 aaPredicted RBP10.48□□□□□ -0.73
CDH13-202ENST00000428848 ATP2B3Q16720 1220 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 KSR2Q6VAB6 950 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 RBM43Q6ZSC3 357 aaKnown RBP10.48□□□□□ -0.73
CDH13-202ENST00000428848 FAM200AQ8TCP9 573 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 ANKRD24Q8TF21 1146 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 JARID2Q92833 1246 aaPredicted RBP10.48□□□□□ -0.73
CDH13-202ENST00000428848 KAZALD1Q96I82 304 aa10.48□□□□□ -0.73
CDH13-202ENST00000428848 PA2G4Q9UQ80 394 aaKnown RBP10.48□□□□□ -0.73
CDH13-202ENST00000428848 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.48□□□□□ -0.73
CDH13-202ENST00000428848 MED23Q9ULK4 1368 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 MRC1P22897 1456 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 SLC27A2O14975 620 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 IFIT2P09913 472 aaKnown RBP10.47□□□□□ -0.73
CDH13-202ENST00000428848 KRT85P78386 507 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 NMIQ13287 307 aaPredicted RBP10.47□□□□□ -0.73
CDH13-202ENST00000428848 TSGA10IPQ3SY00 556 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 LARP1BQ659C4 914 aaKnown RBP10.47□□□□□ -0.73
CDH13-202ENST00000428848 CDC37L1Q7L3B6 337 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms