RNA–Protein interactions for RNA: ENST00000428621.5

CLHC1-207, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 2

Gene CLHC1, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-207ENST00000428621 PA2G4Q9UQ80 394 aaKnown RBP9.69□□□□□ -0.86
CLHC1-207ENST00000428621 TMEM94Q12767 1356 aa9.69□□□□□ -0.86
CLHC1-207ENST00000428621 MED23Q9ULK4 1368 aa9.69□□□□□ -0.86
CLHC1-207ENST00000428621 SASH1O94885 1247 aa9.68□□□□□ -0.86
CLHC1-207ENST00000428621 G3BP1Q13283 466 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLHC1-207ENST00000428621 GCKRQ14397 625 aa9.68□□□□□ -0.86
CLHC1-207ENST00000428621 RUFY3Q7L099 469 aa9.68□□□□□ -0.86
CLHC1-207ENST00000428621 METTL22Q9BUU2 404 aaPredicted RBP9.68□□□□□ -0.86
CLHC1-207ENST00000428621 ZSWIM6Q9HCJ5 1215 aa9.68□□□□□ -0.86
CLHC1-207ENST00000428621 PHF14O94880 888 aa9.68□□□□□ -0.86
CLHC1-207ENST00000428621 PDIA4P13667 645 aaKnown RBP9.68□□□□□ -0.86
CLHC1-207ENST00000428621 ATF3P18847 181 aa9.68□□□□□ -0.86
CLHC1-207ENST00000428621 PRIM1P49642 420 aaKnown RBP9.68□□□□□ -0.86
CLHC1-207ENST00000428621 NOL8Q76FK4 1167 aaKnown RBP9.68□□□□□ -0.86
CLHC1-207ENST00000428621 RIC3Q7Z5B4 369 aa9.68□□□□□ -0.86
CLHC1-207ENST00000428621 EAF2Q96CJ1 260 aaPredicted RBP9.68□□□□□ -0.86
CLHC1-207ENST00000428621 ZSCAN31Q96LW9 406 aaPredicted RBP9.68□□□□□ -0.86
CLHC1-207ENST00000428621 NLRP2Q9NX02 1062 aa9.68□□□□□ -0.86
CLHC1-207ENST00000428621 SNRPA1P09661 255 aaKnown RBP9.67□□□□□ -0.86
CLHC1-207ENST00000428621 ZKSCAN1P17029 563 aaPredicted RBP9.67□□□□□ -0.86
CLHC1-207ENST00000428621 CASTP20810 708 aaKnown RBP9.67□□□□□ -0.86
CLHC1-207ENST00000428621 ZC3H6P61129 1189 aaKnown RBP9.67□□□□□ -0.86
CLHC1-207ENST00000428621 NECTIN1Q15223 517 aa9.67□□□□□ -0.86
CLHC1-207ENST00000428621 RBSNQ9H1K0 784 aa9.67□□□□□ -0.86
CLHC1-207ENST00000428621 COPRSQ9NQ92 184 aa9.67□□□□□ -0.86
CLHC1-207ENST00000428621 ATP6V1DQ9Y5K8 247 aa9.67□□□□□ -0.86
CLHC1-207ENST00000428621 ARFGEF2Q9Y6D5 1785 aa9.67□□□□□ -0.86
CLHC1-207ENST00000428621 ZSCAN22P10073 491 aaPredicted RBP9.67□□□□□ -0.86
CLHC1-207ENST00000428621 RABL6Q3YEC7 729 aaPredicted RBP9.67□□□□□ -0.86
CLHC1-207ENST00000428621 ZSCAN30Q86W11 494 aa9.67□□□□□ -0.86
CLHC1-207ENST00000428621 XAGE3Q8WTP9 111 aa9.67□□□□□ -0.86
CLHC1-207ENST00000428621 MAP4K1Q92918 833 aa9.67□□□□□ -0.86
CLHC1-207ENST00000428621 ZNF496Q96IT1 587 aaPredicted RBP9.67□□□□□ -0.86
CLHC1-207ENST00000428621 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
CLHC1-207ENST00000428621 RBM27Q9P2N5 1060 aaKnown RBP9.67□□□□□ -0.86
CLHC1-207ENST00000428621 CYP46A1Q9Y6A2 500 aa9.67□□□□□ -0.86
CLHC1-207ENST00000428621 SYCE3A1L190 88 aa9.66□□□□□ -0.86
CLHC1-207ENST00000428621 STX6O43752 255 aa9.66□□□□□ -0.86
CLHC1-207ENST00000428621 PTH1RQ03431 593 aa9.66□□□□□ -0.86
CLHC1-207ENST00000428621 AIMP1Q12904 312 aaKnown RBP9.66□□□□□ -0.86
CLHC1-207ENST00000428621 SLC39A6Q13433 755 aa9.66□□□□□ -0.86
CLHC1-207ENST00000428621 CADPS2Q86UW7 1296 aa9.66□□□□□ -0.86
CLHC1-207ENST00000428621 TTC5Q8N0Z6 440 aa9.66□□□□□ -0.86
CLHC1-207ENST00000428621 JAKMIP1Q96N16 626 aaKnown RBP9.66□□□□□ -0.86
CLHC1-207ENST00000428621 ANO8Q9HCE9 1232 aaPredicted RBP9.66□□□□□ -0.86
CLHC1-207ENST00000428621 NSFL1CQ9UNZ2 370 aaKnown RBP9.66□□□□□ -0.86
CLHC1-207ENST00000428621 STRCP1A6NGW2 1772 aa9.66□□□□□ -0.86
CLHC1-207ENST00000428621 CYP27B1O15528 508 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 SYT1P21579 422 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 RNF20Q5VTR2 975 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
CLHC1-207ENST00000428621 PRPF40BQ6NWY9 871 aaKnown RBP9.65□□□□□ -0.86
CLHC1-207ENST00000428621 ANKRD13DQ6ZTN6 518 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 COPS6Q7L5N1 327 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 NFATC2IPQ8NCF5 419 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.86
CLHC1-207ENST00000428621 CHAMP1Q96JM3 812 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 ALDH8A1Q9H2A2 487 aaPredicted RBP9.65□□□□□ -0.86
CLHC1-207ENST00000428621 PDRG1Q9NUG6 133 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 HMG20BQ9P0W2 317 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 SMC3Q9UQE7 1217 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 RBM8AQ9Y5S9 174 aaKnown RBP9.65□□□□□ -0.86
CLHC1-207ENST00000428621 SPATA31A3Q5VYP0 1347 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 UBR2Q8IWV8 1755 aa9.65□□□□□ -0.86
CLHC1-207ENST00000428621 PAPPAQ13219 1627 aa9.65□□□□□ -0.87
CLHC1-207ENST00000428621 F13A1P00488 732 aa9.65□□□□□ -0.87
CLHC1-207ENST00000428621 PSMA5P28066 241 aa9.65□□□□□ -0.87
CLHC1-207ENST00000428621 NMIQ13287 307 aaPredicted RBP9.65□□□□□ -0.87
CLHC1-207ENST00000428621 CSPP1Q1MSJ5 1256 aa9.65□□□□□ -0.87
CLHC1-207ENST00000428621 CREB3L3Q68CJ9 461 aa9.65□□□□□ -0.87
CLHC1-207ENST00000428621 TICAM2Q86XR7 235 aa9.65□□□□□ -0.87
CLHC1-207ENST00000428621 MYD88Q99836 296 aa9.65□□□□□ -0.87
CLHC1-207ENST00000428621 TLR7Q9NYK1 1049 aaKnown RBP9.65□□□□□ -0.87
CLHC1-207ENST00000428621 MYL6BP14649 208 aa9.64□□□□□ -0.87
CLHC1-207ENST00000428621 ATP5JP18859 108 aa9.64□□□□□ -0.87
CLHC1-207ENST00000428621 RFX5P48382 616 aaPredicted RBP9.64□□□□□ -0.87
CLHC1-207ENST00000428621 ANKRD1Q15327 319 aa9.64□□□□□ -0.87
CLHC1-207ENST00000428621 ADCK5Q3MIX3 580 aa9.64□□□□□ -0.87
CLHC1-207ENST00000428621 TSGA10IPQ3SY00 556 aa9.64□□□□□ -0.87
CLHC1-207ENST00000428621 FAM184AQ8NB25 1140 aa9.64□□□□□ -0.87
CLHC1-207ENST00000428621 FSD1Q9BTV5 496 aa9.64□□□□□ -0.87
CLHC1-207ENST00000428621 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.64□□□□□ -0.87
CLHC1-207ENST00000428621 AFDNP55196 1824 aaKnown RBP9.64□□□□□ -0.87
CLHC1-207ENST00000428621 LARGE1O95461 756 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 CSB-PGBD3P0DP91 1061 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 UBE2HP62256 183 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 EPHA10Q5JZY3 1008 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 USP48Q86UV5 1035 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 FAM227BQ96M60 508 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 TSPY26PQ9H489 355 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 A0A0D9SFI3 127 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 SLC27A2O14975 620 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 LETM1O95202 739 aaPredicted RBP9.63□□□□□ -0.87
CLHC1-207ENST00000428621 PTPN12Q05209 780 aaKnown RBP9.63□□□□□ -0.87
CLHC1-207ENST00000428621 TNNI3KQ59H18 835 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 CCDC183Q5T5S1 534 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 USPL1Q5W0Q7 1092 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 PLBD2Q8NHP8 589 aa9.63□□□□□ -0.87
CLHC1-207ENST00000428621 CCDC8Q9H0W5 538 aaPredicted RBP9.63□□□□□ -0.87
CLHC1-207ENST00000428621 FPGT-TNNI3KV9GXZ4 949 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms