RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 SLC10A5Q5PT55 438 aa20.04■□□□□ 0.8
TSPO-204ENST00000428336 RBM46Q8TBY0 533 aaKnown RBP20.04■□□□□ 0.8
TSPO-204ENST00000428336 DBF4Q9UBU7 674 aaPredicted RBP20.04■□□□□ 0.8
TSPO-204ENST00000428336 TNRC6CQ9HCJ0 1690 aaKnown RBP20.03■□□□□ 0.8
TSPO-204ENST00000428336 FER1L6Q2WGJ9 1857 aa20.03■□□□□ 0.8
TSPO-204ENST00000428336 ANP32CO43423 234 aa20.03■□□□□ 0.8
TSPO-204ENST00000428336 NLRP10Q86W26 655 aa20.03■□□□□ 0.8
TSPO-204ENST00000428336 FKBP4Q02790 459 aaKnown RBP eCLIP20.02■□□□□ 0.8
TSPO-204ENST00000428336 C16orf71Q8IYS4 520 aaPredicted RBP20.02■□□□□ 0.8
TSPO-204ENST00000428336 RTKN2Q8IZC4 609 aa20.02■□□□□ 0.8
TSPO-204ENST00000428336 PLBD2Q8NHP8 589 aa20.02■□□□□ 0.8
TSPO-204ENST00000428336 RPGRQ92834 1020 aaKnown RBP20.02■□□□□ 0.8
TSPO-204ENST00000428336 POTECB2RU33 542 aa20.01■□□□□ 0.79
TSPO-204ENST00000428336 DPY19L2Q6NUT2 758 aa20.01■□□□□ 0.79
TSPO-204ENST00000428336 ANKRD13DQ6ZTN6 518 aa20.01■□□□□ 0.79
TSPO-204ENST00000428336 SYNE4Q8N205 404 aa20.01■□□□□ 0.79
TSPO-204ENST00000428336 C8orf58Q8NAV2 365 aa20.01■□□□□ 0.79
TSPO-204ENST00000428336 CRAMP1Q96RY5 1269 aa20.01■□□□□ 0.79
TSPO-204ENST00000428336 MRS2Q9HD23 443 aa20.01■□□□□ 0.79
TSPO-204ENST00000428336 HYPKQ9NX55 129 aa20.01■□□□□ 0.79
TSPO-204ENST00000428336 ARFGEF2Q9Y6D5 1785 aa20■□□□□ 0.79
TSPO-204ENST00000428336 ELL2O00472 640 aaPredicted RBP20■□□□□ 0.79
TSPO-204ENST00000428336 VEGFAP15692 232 aaPredicted RBP20■□□□□ 0.79
TSPO-204ENST00000428336 CCDC27Q2M243 656 aa20■□□□□ 0.79
TSPO-204ENST00000428336 RBM17Q96I25 401 aaKnown RBP20■□□□□ 0.79
TSPO-204ENST00000428336 NLRP3Q96P20 1036 aa20■□□□□ 0.79
TSPO-204ENST00000428336 ZNF277Q9NRM2 450 aaPredicted RBP20■□□□□ 0.79
TSPO-204ENST00000428336 SNED1Q8TER0 1413 aa20■□□□□ 0.79
TSPO-204ENST00000428336 RNF123Q5XPI4 1314 aa20■□□□□ 0.79
TSPO-204ENST00000428336 FSTL1Q12841 308 aa19.98■□□□□ 0.79
TSPO-204ENST00000428336 CC2D2BQ6DHV5 1058 aa19.98■□□□□ 0.79
TSPO-204ENST00000428336 SLC51AQ86UW1 340 aa19.98■□□□□ 0.79
TSPO-204ENST00000428336 WWC1Q8IX03 1113 aa19.98■□□□□ 0.79
TSPO-204ENST00000428336 ISCA1Q9BUE6 129 aa19.98■□□□□ 0.79
TSPO-204ENST00000428336 TRMT112Q9UI30 125 aaKnown RBP19.98■□□□□ 0.79
TSPO-204ENST00000428336 DDNO94850 711 aaPredicted RBP19.97■□□□□ 0.79
TSPO-204ENST00000428336 HCLS1P14317 486 aaPredicted RBP19.97■□□□□ 0.79
TSPO-204ENST00000428336 PSMD1Q99460 953 aa19.97■□□□□ 0.79
TSPO-204ENST00000428336 TIAM2Q8IVF5 1701 aa19.96■□□□□ 0.79
TSPO-204ENST00000428336 APLP1P51693 650 aa19.96■□□□□ 0.79
TSPO-204ENST00000428336 NCBP3Q53F19 620 aaKnown RBP19.96■□□□□ 0.79
TSPO-204ENST00000428336 TSPYL6Q8N831 410 aa19.96■□□□□ 0.79
TSPO-204ENST00000428336 ZNF428Q96B54 188 aa19.96■□□□□ 0.79
TSPO-204ENST00000428336 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
TSPO-204ENST00000428336 CACNA1SQ13698 1873 aa19.96■□□□□ 0.79
TSPO-204ENST00000428336 CCDC88AQ3V6T2 1871 aa19.96■□□□□ 0.79
TSPO-204ENST00000428336 SH3TC1Q8TE82 1336 aa19.96■□□□□ 0.79
TSPO-204ENST00000428336 ATP5J2-PTCD1G3V325 749 aa19.95■□□□□ 0.78
TSPO-204ENST00000428336 PPEF1O14829 653 aaPredicted RBP19.95■□□□□ 0.78
TSPO-204ENST00000428336 IARSP41252 1262 aaKnown RBP19.95■□□□□ 0.78
TSPO-204ENST00000428336 TSR2Q969E8 191 aaKnown RBP19.95■□□□□ 0.78
TSPO-204ENST00000428336 CEP350Q5VT06 3117 aa19.95■□□□□ 0.78
TSPO-204ENST00000428336 TRIM28Q13263 835 aaKnown RBP19.94■□□□□ 0.78
TSPO-204ENST00000428336 SMC1BQ8NDV3 1235 aa19.94■□□□□ 0.78
TSPO-204ENST00000428336 TCERG1O14776 1098 aaKnown RBP19.93■□□□□ 0.78
TSPO-204ENST00000428336 GRIPAP1Q4V328 841 aa19.93■□□□□ 0.78
TSPO-204ENST00000428336 ATP6V0A2Q9Y487 856 aa19.93■□□□□ 0.78
TSPO-204ENST00000428336 ABCC4O15439 1325 aa19.93■□□□□ 0.78
TSPO-204ENST00000428336 WDR90Q96KV7 1748 aa19.93■□□□□ 0.78
TSPO-204ENST00000428336 DICER1Q9UPY3 1922 aaKnown RBP19.92■□□□□ 0.78
TSPO-204ENST00000428336 FZD9O00144 591 aa19.92■□□□□ 0.78
TSPO-204ENST00000428336 GOLGA2Q08379 1002 aa19.92■□□□□ 0.78
TSPO-204ENST00000428336 CCDC30Q5VVM6 783 aa19.92■□□□□ 0.78
TSPO-204ENST00000428336 RIC3Q7Z5B4 369 aa19.92■□□□□ 0.78
TSPO-204ENST00000428336 FAM89AQ96GI7 184 aa19.92■□□□□ 0.78
TSPO-204ENST00000428336 ZNF541Q9H0D2 1346 aa19.92■□□□□ 0.78
TSPO-204ENST00000428336 BBOX1O75936 387 aa19.91■□□□□ 0.78
TSPO-204ENST00000428336 L3MBTL3Q96JM7 780 aaPredicted RBP19.91■□□□□ 0.78
TSPO-204ENST00000428336 IL16Q14005 1332 aa19.91■□□□□ 0.78
TSPO-204ENST00000428336 ANKRD36CQ5JPF3 1778 aa19.9■□□□□ 0.78
TSPO-204ENST00000428336 DNAJC5GQ8N7S2 189 aa19.9■□□□□ 0.78
TSPO-204ENST00000428336 CHMP4AQ9BY43 222 aa19.9■□□□□ 0.78
TSPO-204ENST00000428336 GRAPQ13588 217 aa19.89■□□□□ 0.77
TSPO-204ENST00000428336 DDX46Q7L014 1031 aaKnown RBP19.89■□□□□ 0.77
TSPO-204ENST00000428336 SP8Q8IXZ3 490 aa19.89■□□□□ 0.77
TSPO-204ENST00000428336 GRAPLQ8TC17 118 aaPredicted RBP19.89■□□□□ 0.77
TSPO-204ENST00000428336 SF3B3Q15393 1217 aaKnown RBP19.88■□□□□ 0.77
TSPO-204ENST00000428336 JDP2Q8WYK2 163 aa19.88■□□□□ 0.77
TSPO-204ENST00000428336 SALL2Q9Y467 1007 aaPredicted RBP19.88■□□□□ 0.77
TSPO-204ENST00000428336 COL4A5P29400 1685 aa19.87■□□□□ 0.77
TSPO-204ENST00000428336 IQCA1LA6NCM1 817 aa19.87■□□□□ 0.77
TSPO-204ENST00000428336 IRS4O14654 1257 aaPredicted RBP19.87■□□□□ 0.77
TSPO-204ENST00000428336 HTRA3P83110 453 aa19.87■□□□□ 0.77
TSPO-204ENST00000428336 TWISTNBQ3B726 338 aaPredicted RBP19.87■□□□□ 0.77
TSPO-204ENST00000428336 RTL5Q5HYW3 569 aaPredicted RBP19.87■□□□□ 0.77
TSPO-204ENST00000428336 MYD88Q99836 296 aa19.87■□□□□ 0.77
TSPO-204ENST00000428336 RTFDC1Q9BY42 306 aaPredicted RBP19.87■□□□□ 0.77
TSPO-204ENST00000428336 TMX4Q9H1E5 349 aaPredicted RBP19.87■□□□□ 0.77
TSPO-204ENST00000428336 POTEIP0CG38 1075 aa19.86■□□□□ 0.77
TSPO-204ENST00000428336 POTEJP0CG39 1038 aa19.86■□□□□ 0.77
TSPO-204ENST00000428336 WDR63Q8IWG1 891 aa19.86■□□□□ 0.77
TSPO-204ENST00000428336 LARGE2Q8N3Y3 721 aa19.86■□□□□ 0.77
TSPO-204ENST00000428336 ZBTB38Q8NAP3 1195 aaPredicted RBP19.86■□□□□ 0.77
TSPO-204ENST00000428336 METTL22Q9BUU2 404 aaPredicted RBP19.86■□□□□ 0.77
TSPO-204ENST00000428336 TAF1DQ9H5J8 278 aaPredicted RBP19.86■□□□□ 0.77
TSPO-204ENST00000428336 DDX58O95786 925 aaKnown RBP19.85■□□□□ 0.77
TSPO-204ENST00000428336 MPNDQ8N594 471 aa19.85■□□□□ 0.77
TSPO-204ENST00000428336 CCDC191Q8NCU4 936 aa19.85■□□□□ 0.77
TSPO-204ENST00000428336 VPS33BQ9H267 617 aa19.85■□□□□ 0.77
TSPO-204ENST00000428336 FANCIQ9NVI1 1328 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms