RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 DIAPH3Q9NSV4 1193 aa12.65□□□□□ -0.38
HDAC9-210ENST00000428307 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
HDAC9-210ENST00000428307 SGSM2O43147 1006 aa12.64□□□□□ -0.39
HDAC9-210ENST00000428307 CYP19A1P11511 503 aaPredicted RBP12.64□□□□□ -0.39
HDAC9-210ENST00000428307 FAM89AQ96GI7 184 aa12.64□□□□□ -0.39
HDAC9-210ENST00000428307 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
HDAC9-210ENST00000428307 GPTP24298 496 aa12.64□□□□□ -0.39
HDAC9-210ENST00000428307 DDIT3P35638 169 aa12.64□□□□□ -0.39
HDAC9-210ENST00000428307 HLFQ16534 295 aa12.64□□□□□ -0.39
HDAC9-210ENST00000428307 CCDC85AQ96PX6 553 aaPredicted RBP12.64□□□□□ -0.39
HDAC9-210ENST00000428307 ISCA1Q9BUE6 129 aa12.64□□□□□ -0.39
HDAC9-210ENST00000428307 ZBTB1Q9Y2K1 713 aa12.64□□□□□ -0.39
HDAC9-210ENST00000428307 COL16A1Q07092 1604 aaPredicted RBP12.64□□□□□ -0.39
HDAC9-210ENST00000428307 TNNI3KQ59H18 835 aa12.63□□□□□ -0.39
HDAC9-210ENST00000428307 MARCH10Q8NA82 808 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-210ENST00000428307 EVI5LQ96CN4 794 aa12.63□□□□□ -0.39
HDAC9-210ENST00000428307 ZNF594Q96JF6 807 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-210ENST00000428307 FPGT-TNNI3KV9GXZ4 949 aa12.63□□□□□ -0.39
HDAC9-210ENST00000428307 UBR2Q8IWV8 1755 aa12.63□□□□□ -0.39
HDAC9-210ENST00000428307 KIAA1211Q6ZU35 1233 aa12.63□□□□□ -0.39
HDAC9-210ENST00000428307 CDCA7Q9BWT1 371 aaPredicted RBP12.63□□□□□ -0.39
HDAC9-210ENST00000428307 DBNLQ9UJU6 430 aaKnown RBP12.63□□□□□ -0.39
HDAC9-210ENST00000428307 THRAP3Q9Y2W1 955 aaKnown RBP12.63□□□□□ -0.39
HDAC9-210ENST00000428307 COL15A1P39059 1388 aa12.62□□□□□ -0.39
HDAC9-210ENST00000428307 SYNE4Q8N205 404 aa12.62□□□□□ -0.39
HDAC9-210ENST00000428307 EDC3Q96F86 508 aaKnown RBP12.62□□□□□ -0.39
HDAC9-210ENST00000428307 UPF3BQ9BZI7 483 aaKnown RBP12.62□□□□□ -0.39
HDAC9-210ENST00000428307 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
HDAC9-210ENST00000428307 NDUFB9Q9Y6M9 179 aa12.62□□□□□ -0.39
HDAC9-210ENST00000428307 LAMB4A4D0S4 1761 aa12.62□□□□□ -0.39
HDAC9-210ENST00000428307 ARFGEF2Q9Y6D5 1785 aa12.62□□□□□ -0.39
HDAC9-210ENST00000428307 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
HDAC9-210ENST00000428307 DBNDD2Q9BQY9 259 aa12.62□□□□□ -0.39
HDAC9-210ENST00000428307 SPATA31A5Q5VU36 1347 aa12.62□□□□□ -0.39
HDAC9-210ENST00000428307 SPATA31A7Q8IWB4 1347 aa12.62□□□□□ -0.39
HDAC9-210ENST00000428307 LRRC24Q50LG9 513 aa12.61□□□□□ -0.39
HDAC9-210ENST00000428307 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
HDAC9-210ENST00000428307 NOL8Q76FK4 1167 aaKnown RBP12.61□□□□□ -0.39
HDAC9-210ENST00000428307 ATG9AQ7Z3C6 839 aa12.61□□□□□ -0.39
HDAC9-210ENST00000428307 NGLY1Q96IV0 654 aa12.61□□□□□ -0.39
HDAC9-210ENST00000428307 NEUROD6Q96NK8 337 aa12.61□□□□□ -0.39
HDAC9-210ENST00000428307 LSG1Q9H089 658 aaKnown RBP12.61□□□□□ -0.39
HDAC9-210ENST00000428307 MAP3K15Q6ZN16 1313 aa12.61□□□□□ -0.39
HDAC9-210ENST00000428307 PAPPAQ13219 1627 aa12.61□□□□□ -0.39
HDAC9-210ENST00000428307 COL22A1Q8NFW1 1626 aaPredicted RBP12.61□□□□□ -0.39
HDAC9-210ENST00000428307 HSPA4P34932 840 aa12.61□□□□□ -0.39
HDAC9-210ENST00000428307 ANAPC15P60006 121 aa12.61□□□□□ -0.39
HDAC9-210ENST00000428307 TIMM10P62072 90 aa12.61□□□□□ -0.39
HDAC9-210ENST00000428307 FAM227BQ96M60 508 aa12.61□□□□□ -0.39
HDAC9-210ENST00000428307 MCM4P33991 863 aa12.6□□□□□ -0.39
HDAC9-210ENST00000428307 TRIM28Q13263 835 aaKnown RBP12.6□□□□□ -0.39
HDAC9-210ENST00000428307 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
HDAC9-210ENST00000428307 RUFY2Q8WXA3 655 aa12.6□□□□□ -0.39
HDAC9-210ENST00000428307 FSD1Q9BTV5 496 aa12.6□□□□□ -0.39
HDAC9-210ENST00000428307 PUS3Q9BZE2 481 aaKnown RBP12.6□□□□□ -0.39
HDAC9-210ENST00000428307 RAD50Q92878 1312 aa12.6□□□□□ -0.39
HDAC9-210ENST00000428307 KCNQ2O43526 872 aa12.59□□□□□ -0.39
HDAC9-210ENST00000428307 PHLPP1O60346 1717 aa12.59□□□□□ -0.39
HDAC9-210ENST00000428307 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
HDAC9-210ENST00000428307 PTH1RQ03431 593 aa12.59□□□□□ -0.39
HDAC9-210ENST00000428307 CCDC57Q2TAC2 916 aa12.59□□□□□ -0.39
HDAC9-210ENST00000428307 TNPO1Q92973 898 aaKnown RBP12.59□□□□□ -0.39
HDAC9-210ENST00000428307 NMIQ13287 307 aaPredicted RBP12.59□□□□□ -0.39
HDAC9-210ENST00000428307 GSE1Q14687 1217 aa12.59□□□□□ -0.39
HDAC9-210ENST00000428307 DZIP3Q86Y13 1208 aaKnown RBP12.59□□□□□ -0.39
HDAC9-210ENST00000428307 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
HDAC9-210ENST00000428307 ZGPATQ8N5A5 531 aaKnown RBP12.59□□□□□ -0.39
HDAC9-210ENST00000428307 ZBTB38Q8NAP3 1195 aaPredicted RBP12.59□□□□□ -0.39
HDAC9-210ENST00000428307 DNAJC2Q99543 621 aaKnown RBP12.59□□□□□ -0.39
HDAC9-210ENST00000428307 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
HDAC9-210ENST00000428307 EYA2O00167 538 aa12.58□□□□□ -0.4
HDAC9-210ENST00000428307 PCCAP05165 728 aaPredicted RBP12.58□□□□□ -0.4
HDAC9-210ENST00000428307 ATP5JP18859 108 aa12.58□□□□□ -0.4
HDAC9-210ENST00000428307 NLRP10Q86W26 655 aa12.58□□□□□ -0.4
HDAC9-210ENST00000428307 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
HDAC9-210ENST00000428307 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
HDAC9-210ENST00000428307 IL15P40933 162 aaPredicted RBP12.58□□□□□ -0.4
HDAC9-210ENST00000428307 TMX3Q96JJ7 454 aa12.58□□□□□ -0.4
HDAC9-210ENST00000428307 LOC102724428A0A0B4J2F2 783 aa12.57□□□□□ -0.4
HDAC9-210ENST00000428307 A0A0D9SFI3 127 aa12.57□□□□□ -0.4
HDAC9-210ENST00000428307 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
HDAC9-210ENST00000428307 SIK1P57059 783 aa12.57□□□□□ -0.4
HDAC9-210ENST00000428307 RAB3GAP1Q15042 981 aa12.57□□□□□ -0.4
HDAC9-210ENST00000428307 BARGINQ6ZT62 677 aa12.57□□□□□ -0.4
HDAC9-210ENST00000428307 TRMT112Q9UI30 125 aaKnown RBP12.57□□□□□ -0.4
HDAC9-210ENST00000428307 SNX14Q9Y5W7 946 aa12.57□□□□□ -0.4
HDAC9-210ENST00000428307 EPB41L2O43491 1005 aaKnown RBP12.57□□□□□ -0.4
HDAC9-210ENST00000428307 CHGBP05060 677 aa12.57□□□□□ -0.4
HDAC9-210ENST00000428307 TAF7LQ5H9L4 462 aa12.57□□□□□ -0.4
HDAC9-210ENST00000428307 FAM177BA6PVY3 158 aa12.56□□□□□ -0.4
HDAC9-210ENST00000428307 HIP1O00291 1037 aa12.56□□□□□ -0.4
HDAC9-210ENST00000428307 SSFA2P28290 1259 aa12.56□□□□□ -0.4
HDAC9-210ENST00000428307 CRKLP46109 303 aaKnown RBP12.56□□□□□ -0.4
HDAC9-210ENST00000428307 KCNJ4P48050 445 aa12.56□□□□□ -0.4
HDAC9-210ENST00000428307 HSP90AB3PQ58FF7 597 aa12.56□□□□□ -0.4
HDAC9-210ENST00000428307 PRPF40BQ6NWY9 871 aaKnown RBP12.56□□□□□ -0.4
HDAC9-210ENST00000428307 INTS5Q6P9B9 1019 aaKnown RBP12.56□□□□□ -0.4
HDAC9-210ENST00000428307 DDX46Q7L014 1031 aaKnown RBP12.56□□□□□ -0.4
HDAC9-210ENST00000428307 ITGB4P16144 1822 aa12.56□□□□□ -0.4
HDAC9-210ENST00000428307 IFIT5Q13325 482 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms