RNA–Protein interactions for RNA: ENST00000428214.5

PEX1-203, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 1 (best) BASIC

Gene PEX1, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-203ENST00000428214 H7C1W4 665 aa13.77□□□□□ -0.21
PEX1-203ENST00000428214 CHGBP05060 677 aa13.77□□□□□ -0.21
PEX1-203ENST00000428214 CWC25Q9NXE8 425 aaPredicted RBP13.77□□□□□ -0.21
PEX1-203ENST00000428214 NUP98P52948 1817 aa13.77□□□□□ -0.21
PEX1-203ENST00000428214 ERBB4Q15303 1308 aa13.77□□□□□ -0.21
PEX1-203ENST00000428214 RILPL2Q969X0 211 aa13.77□□□□□ -0.21
PEX1-203ENST00000428214 NOP58Q9Y2X3 529 aaKnown RBP13.77□□□□□ -0.21
PEX1-203ENST00000428214 THSD7AQ9UPZ6 1657 aa13.76□□□□□ -0.21
PEX1-203ENST00000428214 PI4K2BQ8TCG2 481 aa13.76□□□□□ -0.21
PEX1-203ENST00000428214 PUS3Q9BZE2 481 aaKnown RBP13.76□□□□□ -0.21
PEX1-203ENST00000428214 TCIRG1Q13488 830 aa13.76□□□□□ -0.21
PEX1-203ENST00000428214 DZIP3Q86Y13 1208 aaKnown RBP13.76□□□□□ -0.21
PEX1-203ENST00000428214 ISCA1Q9BUE6 129 aa13.76□□□□□ -0.21
PEX1-203ENST00000428214 C22orf23Q9BZE7 217 aa13.76□□□□□ -0.21
PEX1-203ENST00000428214 MAP3K15Q6ZN16 1313 aa13.76□□□□□ -0.21
PEX1-203ENST00000428214 BTAF1O14981 1849 aa13.76□□□□□ -0.21
PEX1-203ENST00000428214 LRRC24Q50LG9 513 aa13.75□□□□□ -0.21
PEX1-203ENST00000428214 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
PEX1-203ENST00000428214 SPRYD3Q8NCJ5 442 aa13.75□□□□□ -0.21
PEX1-203ENST00000428214 EDC3Q96F86 508 aaKnown RBP13.75□□□□□ -0.21
PEX1-203ENST00000428214 TRIM6-TRIM34B2RNG4 842 aa13.75□□□□□ -0.21
PEX1-203ENST00000428214 KIF1BPQ96EK5 621 aa13.75□□□□□ -0.21
PEX1-203ENST00000428214 TFCP2Q12800 502 aa13.74□□□□□ -0.21
PEX1-203ENST00000428214 KIF6Q6ZMV9 814 aa13.74□□□□□ -0.21
PEX1-203ENST00000428214 AACSQ86V21 672 aa13.74□□□□□ -0.21
PEX1-203ENST00000428214 QTRT2Q9H974 415 aaKnown RBP13.74□□□□□ -0.21
PEX1-203ENST00000428214 CD2BP2O95400 341 aaKnown RBP13.74□□□□□ -0.21
PEX1-203ENST00000428214 EIF5P55010 431 aaKnown RBP13.74□□□□□ -0.21
PEX1-203ENST00000428214 RABL6Q3YEC7 729 aaPredicted RBP13.74□□□□□ -0.21
PEX1-203ENST00000428214 GIGYF2Q6Y7W6 1299 aaKnown RBP13.74□□□□□ -0.21
PEX1-203ENST00000428214 KIF2CQ99661 725 aa13.74□□□□□ -0.21
PEX1-203ENST00000428214 NLRP10Q86W26 655 aa13.74□□□□□ -0.21
PEX1-203ENST00000428214 OSBPL3Q9H4L5 887 aa13.74□□□□□ -0.21
PEX1-203ENST00000428214 CCDC87Q9NVE4 849 aa13.74□□□□□ -0.21
PEX1-203ENST00000428214 COL4A1P02462 1669 aa13.74□□□□□ -0.21
PEX1-203ENST00000428214 CDC45O75419 566 aa13.73□□□□□ -0.21
PEX1-203ENST00000428214 CCDC24Q8N4L8 307 aa13.73□□□□□ -0.21
PEX1-203ENST00000428214 BRWD3Q6RI45 1802 aa13.73□□□□□ -0.21
PEX1-203ENST00000428214 CCDC191Q8NCU4 936 aa13.72□□□□□ -0.21
PEX1-203ENST00000428214 TEX13AQ9BXU3 409 aaPredicted RBP13.72□□□□□ -0.21
PEX1-203ENST00000428214 COL5A3P25940 1745 aaPredicted RBP13.72□□□□□ -0.21
PEX1-203ENST00000428214 HCLS1P14317 486 aaPredicted RBP13.71□□□□□ -0.21
PEX1-203ENST00000428214 ATG9AQ7Z3C6 839 aa13.71□□□□□ -0.21
PEX1-203ENST00000428214 SLC51AQ86UW1 340 aa13.71□□□□□ -0.21
PEX1-203ENST00000428214 STAP2Q9UGK3 403 aa13.71□□□□□ -0.21
PEX1-203ENST00000428214 SBF2Q86WG5 1849 aa13.71□□□□□ -0.21
PEX1-203ENST00000428214 ATRNO75882 1429 aa13.71□□□□□ -0.21
PEX1-203ENST00000428214 RAB11FIP3O75154 756 aa13.71□□□□□ -0.21
PEX1-203ENST00000428214 SLFNL1Q499Z3 407 aa13.71□□□□□ -0.21
PEX1-203ENST00000428214 SRP68Q9UHB9 627 aaKnown RBP13.71□□□□□ -0.21
PEX1-203ENST00000428214 IL6STP40189 918 aaPredicted RBP13.71□□□□□ -0.22
PEX1-203ENST00000428214 G3BP1Q13283 466 aaKnown RBP eCLIP13.71□□□□□ -0.22
PEX1-203ENST00000428214 SUSD4Q5VX71 490 aa13.71□□□□□ -0.22
PEX1-203ENST00000428214 TAF1P21675 1872 aa13.71□□□□□ -0.22
PEX1-203ENST00000428214 CAMTA2O94983 1202 aa13.7□□□□□ -0.22
PEX1-203ENST00000428214 BICDL1Q6ZP65 573 aa13.7□□□□□ -0.22
PEX1-203ENST00000428214 GREM2Q9H772 168 aa13.7□□□□□ -0.22
PEX1-203ENST00000428214 LRRC4BQ9NT99 713 aa13.7□□□□□ -0.22
PEX1-203ENST00000428214 DBNLQ9UJU6 430 aaKnown RBP13.7□□□□□ -0.22
PEX1-203ENST00000428214 SNAP23O00161 211 aa13.7□□□□□ -0.22
PEX1-203ENST00000428214 TIMM10P62072 90 aa13.7□□□□□ -0.22
PEX1-203ENST00000428214 AK9Q5TCS8 1911 aa13.7□□□□□ -0.22
PEX1-203ENST00000428214 ANKRD36CQ5JPF3 1778 aa13.7□□□□□ -0.22
PEX1-203ENST00000428214 CLASRPQ8N2M8 674 aaKnown RBP13.69□□□□□ -0.22
PEX1-203ENST00000428214 DBNDD2Q9BQY9 259 aa13.69□□□□□ -0.22
PEX1-203ENST00000428214 TBC1D2Q9BYX2 928 aa13.69□□□□□ -0.22
PEX1-203ENST00000428214 BOLA2Q9H3K6 86 aa13.69□□□□□ -0.22
PEX1-203ENST00000428214 TRMT112Q9UI30 125 aaKnown RBP13.69□□□□□ -0.22
PEX1-203ENST00000428214 COPRSQ9NQ92 184 aa13.69□□□□□ -0.22
PEX1-203ENST00000428214 PHF14O94880 888 aa13.69□□□□□ -0.22
PEX1-203ENST00000428214 C3orf67Q6ZVT6 689 aa13.69□□□□□ -0.22
PEX1-203ENST00000428214 TRPC5Q9UL62 973 aaPredicted RBP13.69□□□□□ -0.22
PEX1-203ENST00000428214 ZBTB38Q8NAP3 1195 aaPredicted RBP13.68□□□□□ -0.22
PEX1-203ENST00000428214 UPF2Q9HAU5 1272 aaKnown RBP13.68□□□□□ -0.22
PEX1-203ENST00000428214 COL15A1P39059 1388 aa13.68□□□□□ -0.22
PEX1-203ENST00000428214 IFIT2P09913 472 aaKnown RBP13.68□□□□□ -0.22
PEX1-203ENST00000428214 CHMLP26374 656 aa13.68□□□□□ -0.22
PEX1-203ENST00000428214 WTIPA6NIX2 430 aaPredicted RBP13.68□□□□□ -0.22
PEX1-203ENST00000428214 TRIM37O94972 964 aa13.67□□□□□ -0.22
PEX1-203ENST00000428214 ZNF34Q8IZ26 560 aa13.67□□□□□ -0.22
PEX1-203ENST00000428214 PALD1Q9ULE6 856 aa13.67□□□□□ -0.22
PEX1-203ENST00000428214 IRS4O14654 1257 aaPredicted RBP13.67□□□□□ -0.22
PEX1-203ENST00000428214 NBR1Q14596 966 aa13.67□□□□□ -0.22
PEX1-203ENST00000428214 TNNI3KQ59H18 835 aa13.67□□□□□ -0.22
PEX1-203ENST00000428214 SLKQ9H2G2 1235 aaPredicted RBP13.67□□□□□ -0.22
PEX1-203ENST00000428214 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
PEX1-203ENST00000428214 FPGT-TNNI3KV9GXZ4 949 aa13.67□□□□□ -0.22
PEX1-203ENST00000428214 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
PEX1-203ENST00000428214 PCCAP05165 728 aaPredicted RBP13.67□□□□□ -0.22
PEX1-203ENST00000428214 TTLL11Q8NHH1 800 aa13.67□□□□□ -0.22
PEX1-203ENST00000428214 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
PEX1-203ENST00000428214 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
PEX1-203ENST00000428214 SEC31BQ9NQW1 1179 aa13.67□□□□□ -0.22
PEX1-203ENST00000428214 RREB1Q92766 1687 aa13.66□□□□□ -0.22
PEX1-203ENST00000428214 GNPATO15228 680 aa13.66□□□□□ -0.22
PEX1-203ENST00000428214 ONECUT3O60422 494 aaPredicted RBP13.66□□□□□ -0.22
PEX1-203ENST00000428214 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
PEX1-203ENST00000428214 COL9A3Q14050 684 aaPredicted RBP13.66□□□□□ -0.22
PEX1-203ENST00000428214 CWC27Q6UX04 472 aaKnown RBP13.66□□□□□ -0.22
PEX1-203ENST00000428214 ADORA1P30542 326 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms