RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 TEX35Q5T0J7 233 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 SLF2Q8IX21 1173 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 NLRP3Q96P20 1036 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 SLC26A6Q9BXS9 759 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 KAT14Q9H8E8 782 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 CABP5Q9NP86 173 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 IGHDP01880 384 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 CKAP2LQ8IYA6 745 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 MMRN2Q9H8L6 949 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 MYO1BO43795 1136 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 PPM1FP49593 454 aaPredicted RBP11.32□□□□□ -0.6
SNX13-203ENST00000428135 PLS1Q14651 629 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 C16orf71Q8IYS4 520 aaPredicted RBP11.32□□□□□ -0.6
SNX13-203ENST00000428135 USP16Q9Y5T5 823 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 BAG3O95817 575 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 PTPRCP08575 1304 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 MFSD6Q6ZSS7 791 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 MIGA1Q8NAN2 632 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 PIK3R4Q99570 1358 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 AXDND1Q5T1B0 1012 aaPredicted RBP11.32□□□□□ -0.6
SNX13-203ENST00000428135 PARP3Q9Y6F1 533 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 TTC21AQ8NDW8 1320 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 CHST3Q7LGC8 479 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 NECAB1Q8N987 351 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 CPLX3Q8WVH0 158 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 STK32BQ9NY57 414 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 CEP131Q9UPN4 1083 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 RDXP35241 583 aaKnown RBP11.32□□□□□ -0.6
SNX13-203ENST00000428135 VTI1AQ96AJ9 217 aa11.32□□□□□ -0.6
SNX13-203ENST00000428135 HLA-DOAP06340 250 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 EVI5LQ96CN4 794 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 SLC4A4Q9Y6R1 1079 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 YTHDC2Q9H6S0 1430 aaKnown RBP11.31□□□□□ -0.6
SNX13-203ENST00000428135 EYA1Q99502 592 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 ABCC11Q96J66 1382 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 TMEM87AQ8NBN3 555 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 KCNQ4P56696 695 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 PPP4R3AQ6IN85 833 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 KIAA1328Q86T90 577 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 IDEP14735 1019 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 HOXC9P31274 260 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 TBC1D9Q6ZT07 1266 aa11.31□□□□□ -0.6
SNX13-203ENST00000428135 TSPY3P0CV98 308 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 TSPY8P0CW00 308 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 SSFA2P28290 1259 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 CDR1P51861 262 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 TSPYL6Q8N831 410 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 UTP14AQ9BVJ6 771 aaKnown RBP11.3□□□□□ -0.6
SNX13-203ENST00000428135 RNF41Q9H4P4 317 aaPredicted RBP11.3□□□□□ -0.6
SNX13-203ENST00000428135 POLKQ9UBT6 870 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 CCDC196A0A1B0GTZ2 297 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 PDE4BQ07343 736 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 ATP2B3Q16720 1220 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 RPRD2Q5VT52 1461 aaKnown RBP11.3□□□□□ -0.6
SNX13-203ENST00000428135 MAP3K19Q56UN5 1328 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 TAF3Q5VWG9 929 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 TAX1BP1Q86VP1 789 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 RSPH6AQ9H0K4 717 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 ABCC1P33527 1531 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 TMEM2Q9UHN6 1383 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 GJB2P29033 226 aa11.3□□□□□ -0.6
SNX13-203ENST00000428135 PLEKHH1Q9ULM0 1364 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 OGFOD1Q8N543 542 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 RHPN1Q8TCX5 695 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 ZNF408Q9H9D4 720 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 MAP3K1Q13233 1512 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 AKAP4Q5JQC9 854 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 METAP2P50579 478 aaKnown RBP eCLIP11.29□□□□□ -0.6
SNX13-203ENST00000428135 TTF1Q15361 905 aaPredicted RBP11.29□□□□□ -0.6
SNX13-203ENST00000428135 MAP3K11Q16584 847 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 CRNKL1Q9BZJ0 848 aaKnown RBP11.29□□□□□ -0.6
SNX13-203ENST00000428135 ACBD3Q9H3P7 528 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 LDHCP07864 332 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 GRM8O00222 908 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 TRIM37O94972 964 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 USP8P40818 1118 aa11.29□□□□□ -0.6
SNX13-203ENST00000428135 MACROD2A1Z1Q3 448 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 IARSP41252 1262 aaKnown RBP11.28□□□□□ -0.6
SNX13-203ENST00000428135 SLC9C2Q5TAH2 1124 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 TCERG1LQ5VWI1 586 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 PHACTR3Q96KR7 559 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 PHAXQ9H814 394 aaKnown RBP11.28□□□□□ -0.6
SNX13-203ENST00000428135 MYO6Q9UM54 1294 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNX13-203ENST00000428135 TMEM266Q2M3C6 531 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 HSP90AA4PQ58FG1 418 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 SMARCC1Q92922 1105 aaPredicted RBP11.28□□□□□ -0.6
SNX13-203ENST00000428135 GRPEL1Q9HAV7 217 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 IRS4O14654 1257 aaPredicted RBP11.28□□□□□ -0.6
SNX13-203ENST00000428135 TRAPPC3LQ5T215 181 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 NAA16Q6N069 864 aaPredicted RBP11.28□□□□□ -0.6
SNX13-203ENST00000428135 HEATR3Q7Z4Q2 680 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 ORC3Q9UBD5 711 aaPredicted RBP11.28□□□□□ -0.6
SNX13-203ENST00000428135 MCM4P33991 863 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 CNNM3Q8NE01 707 aa11.28□□□□□ -0.6
SNX13-203ENST00000428135 HCLS1P14317 486 aaPredicted RBP11.27□□□□□ -0.6
SNX13-203ENST00000428135 BAG6P46379 1132 aa11.27□□□□□ -0.6
SNX13-203ENST00000428135 SEPT7Q16181 437 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms