RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 RNF123Q5XPI4 1314 aa19.67■□□□□ 0.74
PHF1-204ENST00000427826 HSPA6P17066 643 aa19.66■□□□□ 0.74
PHF1-204ENST00000427826 HOXA10P31260 410 aaPredicted RBP19.66■□□□□ 0.74
PHF1-204ENST00000427826 TCIRG1Q13488 830 aa19.66■□□□□ 0.74
PHF1-204ENST00000427826 NLRP3Q96P20 1036 aa19.66■□□□□ 0.74
PHF1-204ENST00000427826 RRAGCQ9HB90 399 aa19.66■□□□□ 0.74
PHF1-204ENST00000427826 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
PHF1-204ENST00000427826 ABCC12Q96J65 1359 aa19.66■□□□□ 0.74
PHF1-204ENST00000427826 CCDC27Q2M243 656 aa19.65■□□□□ 0.74
PHF1-204ENST00000427826 SLC10A5Q5PT55 438 aa19.65■□□□□ 0.74
PHF1-204ENST00000427826 RBM46Q8TBY0 533 aaKnown RBP19.65■□□□□ 0.74
PHF1-204ENST00000427826 RBM17Q96I25 401 aaKnown RBP19.65■□□□□ 0.74
PHF1-204ENST00000427826 SLX4Q8IY92 1834 aa19.65■□□□□ 0.74
PHF1-204ENST00000427826 GRIPAP1Q4V328 841 aa19.64■□□□□ 0.73
PHF1-204ENST00000427826 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.73
PHF1-204ENST00000427826 CC2D2BQ6DHV5 1058 aa19.64■□□□□ 0.73
PHF1-204ENST00000427826 ANKRD13DQ6ZTN6 518 aa19.64■□□□□ 0.73
PHF1-204ENST00000427826 PLBD2Q8NHP8 589 aa19.64■□□□□ 0.73
PHF1-204ENST00000427826 VEGFAP15692 232 aaPredicted RBP19.63■□□□□ 0.73
PHF1-204ENST00000427826 FKBP4Q02790 459 aaKnown RBP eCLIP19.63■□□□□ 0.73
PHF1-204ENST00000427826 NLRP10Q86W26 655 aa19.63■□□□□ 0.73
PHF1-204ENST00000427826 CRAMP1Q96RY5 1269 aa19.63■□□□□ 0.73
PHF1-204ENST00000427826 ARFGEF2Q9Y6D5 1785 aa19.62■□□□□ 0.73
PHF1-204ENST00000427826 TRMT112Q9UI30 125 aaKnown RBP19.62■□□□□ 0.73
PHF1-204ENST00000427826 FER1L6Q2WGJ9 1857 aa19.62■□□□□ 0.73
PHF1-204ENST00000427826 FSTL1Q12841 308 aa19.61■□□□□ 0.73
PHF1-204ENST00000427826 TMX4Q9H1E5 349 aaPredicted RBP19.61■□□□□ 0.73
PHF1-204ENST00000427826 SH3TC1Q8TE82 1336 aa19.6■□□□□ 0.73
PHF1-204ENST00000427826 ELL2O00472 640 aaPredicted RBP19.6■□□□□ 0.73
PHF1-204ENST00000427826 WWC1Q8IX03 1113 aa19.6■□□□□ 0.73
PHF1-204ENST00000427826 CCDC30Q5VVM6 783 aa19.59■□□□□ 0.73
PHF1-204ENST00000427826 PSMD1Q99460 953 aa19.59■□□□□ 0.73
PHF1-204ENST00000427826 IL16Q14005 1332 aa19.58■□□□□ 0.73
PHF1-204ENST00000427826 APLP1P51693 650 aa19.58■□□□□ 0.72
PHF1-204ENST00000427826 GOLGA2Q08379 1002 aa19.58■□□□□ 0.72
PHF1-204ENST00000427826 OLFM4Q6UX06 510 aa19.58■□□□□ 0.72
PHF1-204ENST00000427826 SYNE4Q8N205 404 aa19.58■□□□□ 0.72
PHF1-204ENST00000427826 C8orf58Q8NAV2 365 aa19.58■□□□□ 0.72
PHF1-204ENST00000427826 ZNF277Q9NRM2 450 aaPredicted RBP19.58■□□□□ 0.72
PHF1-204ENST00000427826 TNRC6CQ9HCJ0 1690 aaKnown RBP19.58■□□□□ 0.72
PHF1-204ENST00000427826 PPEF1O14829 653 aaPredicted RBP19.57■□□□□ 0.72
PHF1-204ENST00000427826 TRIM28Q13263 835 aaKnown RBP19.57■□□□□ 0.72
PHF1-204ENST00000427826 C3orf67Q6ZVT6 689 aa19.57■□□□□ 0.72
PHF1-204ENST00000427826 RIC3Q7Z5B4 369 aa19.57■□□□□ 0.72
PHF1-204ENST00000427826 SMC1BQ8NDV3 1235 aa19.57■□□□□ 0.72
PHF1-204ENST00000427826 ISCA1Q9BUE6 129 aa19.57■□□□□ 0.72
PHF1-204ENST00000427826 CACNA1SQ13698 1873 aa19.56■□□□□ 0.72
PHF1-204ENST00000427826 BBOX1O75936 387 aa19.56■□□□□ 0.72
PHF1-204ENST00000427826 HCLS1P14317 486 aaPredicted RBP19.56■□□□□ 0.72
PHF1-204ENST00000427826 IARSP41252 1262 aaKnown RBP19.56■□□□□ 0.72
PHF1-204ENST00000427826 TIAM2Q8IVF5 1701 aa19.56■□□□□ 0.72
PHF1-204ENST00000427826 CCDC88AQ3V6T2 1871 aa19.56■□□□□ 0.72
PHF1-204ENST00000427826 DDX58O95786 925 aaKnown RBP19.55■□□□□ 0.72
PHF1-204ENST00000427826 DDX46Q7L014 1031 aaKnown RBP19.55■□□□□ 0.72
PHF1-204ENST00000427826 DICER1Q9UPY3 1922 aaKnown RBP19.55■□□□□ 0.72
PHF1-204ENST00000427826 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
PHF1-204ENST00000427826 HSP90B1P14625 803 aaKnown RBP19.54■□□□□ 0.72
PHF1-204ENST00000427826 JDP2Q8WYK2 163 aa19.54■□□□□ 0.72
PHF1-204ENST00000427826 TSR2Q969E8 191 aaKnown RBP19.54■□□□□ 0.72
PHF1-204ENST00000427826 PHAXQ9H814 394 aaKnown RBP19.54■□□□□ 0.72
PHF1-204ENST00000427826 ATP6V0A2Q9Y487 856 aa19.54■□□□□ 0.72
PHF1-204ENST00000427826 CEP350Q5VT06 3117 aa19.53■□□□□ 0.72
PHF1-204ENST00000427826 POTECB2RU33 542 aa19.53■□□□□ 0.72
PHF1-204ENST00000427826 TCERG1O14776 1098 aaKnown RBP19.53■□□□□ 0.72
PHF1-204ENST00000427826 DDNO94850 711 aaPredicted RBP19.53■□□□□ 0.72
PHF1-204ENST00000427826 WDR63Q8IWG1 891 aa19.53■□□□□ 0.72
PHF1-204ENST00000427826 STK31Q9BXU1 1019 aa19.53■□□□□ 0.72
PHF1-204ENST00000427826 ABCC4O15439 1325 aa19.52■□□□□ 0.72
PHF1-204ENST00000427826 ANKRD36CQ5JPF3 1778 aa19.52■□□□□ 0.72
PHF1-204ENST00000427826 SNED1Q8TER0 1413 aa19.52■□□□□ 0.72
PHF1-204ENST00000427826 IQCA1LA6NCM1 817 aa19.52■□□□□ 0.72
PHF1-204ENST00000427826 TMC4Q7Z404 712 aa19.52■□□□□ 0.72
PHF1-204ENST00000427826 TSPYL6Q8N831 410 aa19.52■□□□□ 0.72
PHF1-204ENST00000427826 FAM89AQ96GI7 184 aa19.52■□□□□ 0.72
PHF1-204ENST00000427826 VPS33BQ9H267 617 aa19.52■□□□□ 0.72
PHF1-204ENST00000427826 WDR90Q96KV7 1748 aa19.51■□□□□ 0.71
PHF1-204ENST00000427826 FZD9O00144 591 aa19.51■□□□□ 0.71
PHF1-204ENST00000427826 GRAPQ13588 217 aa19.51■□□□□ 0.71
PHF1-204ENST00000427826 TWISTNBQ3B726 338 aaPredicted RBP19.51■□□□□ 0.71
PHF1-204ENST00000427826 SP8Q8IXZ3 490 aa19.51■□□□□ 0.71
PHF1-204ENST00000427826 SUPT20HQ8NEM7 779 aa19.51■□□□□ 0.71
PHF1-204ENST00000427826 GRAPLQ8TC17 118 aaPredicted RBP19.51■□□□□ 0.71
PHF1-204ENST00000427826 L3MBTL3Q96JM7 780 aaPredicted RBP19.51■□□□□ 0.71
PHF1-204ENST00000427826 SF3B3Q15393 1217 aaKnown RBP19.5■□□□□ 0.71
PHF1-204ENST00000427826 ZBTB38Q8NAP3 1195 aaPredicted RBP19.5■□□□□ 0.71
PHF1-204ENST00000427826 CCDC191Q8NCU4 936 aa19.5■□□□□ 0.71
PHF1-204ENST00000427826 EIF6P56537 245 aaKnown RBP19.49■□□□□ 0.71
PHF1-204ENST00000427826 FAM9BQ8IZU0 186 aa19.49■□□□□ 0.71
PHF1-204ENST00000427826 LARGE2Q8N3Y3 721 aa19.49■□□□□ 0.71
PHF1-204ENST00000427826 MYD88Q99836 296 aa19.49■□□□□ 0.71
PHF1-204ENST00000427826 IRS4O14654 1257 aaPredicted RBP19.48■□□□□ 0.71
PHF1-204ENST00000427826 DPP8Q6V1X1 898 aaPredicted RBP19.48■□□□□ 0.71
PHF1-204ENST00000427826 KSR2Q6VAB6 950 aa19.48■□□□□ 0.71
PHF1-204ENST00000427826 GPC2Q8N158 579 aa19.48■□□□□ 0.71
PHF1-204ENST00000427826 ZNF428Q96B54 188 aa19.48■□□□□ 0.71
PHF1-204ENST00000427826 METTL22Q9BUU2 404 aaPredicted RBP19.48■□□□□ 0.71
PHF1-204ENST00000427826 SALL2Q9Y467 1007 aaPredicted RBP19.48■□□□□ 0.71
PHF1-204ENST00000427826 ZNF541Q9H0D2 1346 aa19.48■□□□□ 0.71
PHF1-204ENST00000427826 RTL5Q5HYW3 569 aaPredicted RBP19.47■□□□□ 0.71
PHF1-204ENST00000427826 MPNDQ8N594 471 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms