RNA–Protein interactions for RNA: ENST00000427473.2

CTLA4-203, Transcript of cytotoxic T-lymphocyte associated protein 4, humanhuman

TSL 5 BASIC

Gene CTLA4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4-203ENST00000427473 TPTE2Q6XPS3 522 aa16.5■□□□□ 0.23
CTLA4-203ENST00000427473 NLRP10Q86W26 655 aa16.5■□□□□ 0.23
CTLA4-203ENST00000427473 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
CTLA4-203ENST00000427473 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
CTLA4-203ENST00000427473 RNF123Q5XPI4 1314 aa16.49■□□□□ 0.23
CTLA4-203ENST00000427473 N4BP2Q86UW6 1770 aaPredicted RBP16.49■□□□□ 0.23
CTLA4-203ENST00000427473 DLEC1Q9Y238 1755 aa16.49■□□□□ 0.23
CTLA4-203ENST00000427473 PI4KAP2A4QPH2 592 aa16.49■□□□□ 0.23
CTLA4-203ENST00000427473 COL11A2P13942 1736 aaPredicted RBP16.49■□□□□ 0.23
CTLA4-203ENST00000427473 FKBP5Q13451 457 aaPredicted RBP16.49■□□□□ 0.23
CTLA4-203ENST00000427473 PPP1R42Q7Z4L9 355 aa16.49■□□□□ 0.23
CTLA4-203ENST00000427473 CCDC24Q8N4L8 307 aa16.49■□□□□ 0.23
CTLA4-203ENST00000427473 MRPL50Q8N5N7 158 aaKnown RBP16.49■□□□□ 0.23
CTLA4-203ENST00000427473 PI4KAP1Q8N8J0 262 aa16.49■□□□□ 0.23
CTLA4-203ENST00000427473 SSH1Q8WYL5 1049 aa16.49■□□□□ 0.23
CTLA4-203ENST00000427473 METTL22Q9BUU2 404 aaPredicted RBP16.49■□□□□ 0.23
CTLA4-203ENST00000427473 BRIP1Q9BX63 1249 aa16.49■□□□□ 0.23
CTLA4-203ENST00000427473 MAP3K2Q9Y2U5 619 aa16.49■□□□□ 0.23
CTLA4-203ENST00000427473 TRIM28Q13263 835 aaKnown RBP16.48■□□□□ 0.23
CTLA4-203ENST00000427473 MYD88Q99836 296 aa16.48■□□□□ 0.23
CTLA4-203ENST00000427473 ATP5J2-PTCD1G3V325 749 aa16.47■□□□□ 0.23
CTLA4-203ENST00000427473 DPEP1P16444 411 aa16.47■□□□□ 0.23
CTLA4-203ENST00000427473 NUTM1Q86Y26 1132 aa16.47■□□□□ 0.23
CTLA4-203ENST00000427473 UTP14AQ9BVJ6 771 aaKnown RBP16.47■□□□□ 0.23
CTLA4-203ENST00000427473 PDZRN3Q9UPQ7 1066 aa16.47■□□□□ 0.23
CTLA4-203ENST00000427473 BRCA1P38398 1863 aaKnown RBP16.47■□□□□ 0.23
CTLA4-203ENST00000427473 A0A0G2JLW4 131 aa16.46■□□□□ 0.23
CTLA4-203ENST00000427473 KCNA3P22001 575 aa16.46■□□□□ 0.23
CTLA4-203ENST00000427473 GTF2E1P29083 439 aaPredicted RBP16.46■□□□□ 0.23
CTLA4-203ENST00000427473 CHRNA5P30532 468 aa16.46■□□□□ 0.23
CTLA4-203ENST00000427473 PDE6BP35913 854 aa16.46■□□□□ 0.23
CTLA4-203ENST00000427473 ERFEQ4G0M1 354 aa16.46■□□□□ 0.23
CTLA4-203ENST00000427473 DNAAF4Q8WXU2 420 aa16.46■□□□□ 0.23
CTLA4-203ENST00000427473 BCL2L13Q9BXK5 485 aa16.46■□□□□ 0.23
CTLA4-203ENST00000427473 SMC4Q9NTJ3 1288 aa16.46■□□□□ 0.23
CTLA4-203ENST00000427473 PTPRCP08575 1304 aa16.45■□□□□ 0.22
CTLA4-203ENST00000427473 RARSP54136 660 aaKnown RBP16.45■□□□□ 0.22
CTLA4-203ENST00000427473 BRPF1P55201 1214 aaPredicted RBP16.45■□□□□ 0.22
CTLA4-203ENST00000427473 NEXNQ0ZGT2 675 aa16.45■□□□□ 0.22
CTLA4-203ENST00000427473 C2CD5Q86YS7 1000 aa16.45■□□□□ 0.22
CTLA4-203ENST00000427473 CCDC191Q8NCU4 936 aa16.45■□□□□ 0.22
CTLA4-203ENST00000427473 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
CTLA4-203ENST00000427473 LAMB2P55268 1798 aa16.44■□□□□ 0.22
CTLA4-203ENST00000427473 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
CTLA4-203ENST00000427473 IGKV5-2P06315 115 aa16.44■□□□□ 0.22
CTLA4-203ENST00000427473 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
CTLA4-203ENST00000427473 F6X3S4 739 aa16.43■□□□□ 0.22
CTLA4-203ENST00000427473 H0YIN7 160 aa16.43■□□□□ 0.22
CTLA4-203ENST00000427473 CWC25Q9NXE8 425 aaPredicted RBP16.43■□□□□ 0.22
CTLA4-203ENST00000427473 DDX60Q8IY21 1712 aaKnown RBP16.42■□□□□ 0.22
CTLA4-203ENST00000427473 NEURL1BA8MQ27 555 aa16.42■□□□□ 0.22
CTLA4-203ENST00000427473 YBX3P16989 372 aaKnown RBP eCLIP16.42■□□□□ 0.22
CTLA4-203ENST00000427473 MKRN4PQ13434 485 aaPredicted RBP16.42■□□□□ 0.22
CTLA4-203ENST00000427473 CWF19L2Q2TBE0 894 aaKnown RBP16.42■□□□□ 0.22
CTLA4-203ENST00000427473 SLC10A5Q5PT55 438 aa16.42■□□□□ 0.22
CTLA4-203ENST00000427473 ZBTB38Q8NAP3 1195 aaPredicted RBP16.42■□□□□ 0.22
CTLA4-203ENST00000427473 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
CTLA4-203ENST00000427473 GOLGB1Q14789 3259 aaKnown RBP16.42■□□□□ 0.22
CTLA4-203ENST00000427473 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
CTLA4-203ENST00000427473 SRGNP10124 158 aa16.41■□□□□ 0.22
CTLA4-203ENST00000427473 CRY2Q49AN0 593 aa16.41■□□□□ 0.22
CTLA4-203ENST00000427473 BEND3Q5T5X7 828 aa16.41■□□□□ 0.22
CTLA4-203ENST00000427473 PELP1Q8IZL8 1130 aaKnown RBP16.41■□□□□ 0.22
CTLA4-203ENST00000427473 LINS1Q8NG48 757 aa16.41■□□□□ 0.22
CTLA4-203ENST00000427473 MASTLQ96GX5 879 aa16.41■□□□□ 0.22
CTLA4-203ENST00000427473 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
CTLA4-203ENST00000427473 PCCAP05165 728 aaPredicted RBP16.4■□□□□ 0.22
CTLA4-203ENST00000427473 GPR162Q16538 588 aa16.4■□□□□ 0.22
CTLA4-203ENST00000427473 STYK1Q6J9G0 422 aa16.4■□□□□ 0.22
CTLA4-203ENST00000427473 C3orf67Q6ZVT6 689 aa16.4■□□□□ 0.22
CTLA4-203ENST00000427473 SYNE4Q8N205 404 aa16.4■□□□□ 0.22
CTLA4-203ENST00000427473 FAM89AQ96GI7 184 aa16.4■□□□□ 0.22
CTLA4-203ENST00000427473 UTRNP46939 3433 aa16.39■□□□□ 0.21
CTLA4-203ENST00000427473 HCLS1P14317 486 aaPredicted RBP16.39■□□□□ 0.21
CTLA4-203ENST00000427473 NPR1P16066 1061 aa16.39■□□□□ 0.21
CTLA4-203ENST00000427473 DALRD3Q5D0E6 543 aaKnown RBP16.39■□□□□ 0.21
CTLA4-203ENST00000427473 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
CTLA4-203ENST00000427473 NLRP3Q96P20 1036 aa16.39■□□□□ 0.21
CTLA4-203ENST00000427473 BCS1LQ9Y276 419 aa16.39■□□□□ 0.21
CTLA4-203ENST00000427473 CDHR2Q9BYE9 1310 aa16.39■□□□□ 0.21
CTLA4-203ENST00000427473 ARFGEF1Q9Y6D6 1849 aa16.38■□□□□ 0.21
CTLA4-203ENST00000427473 IRS4O14654 1257 aaPredicted RBP16.38■□□□□ 0.21
CTLA4-203ENST00000427473 GCKRQ14397 625 aa16.38■□□□□ 0.21
CTLA4-203ENST00000427473 TTLL6Q8N841 843 aa16.38■□□□□ 0.21
CTLA4-203ENST00000427473 ZNF622Q969S3 477 aaKnown RBP eCLIP16.38■□□□□ 0.21
CTLA4-203ENST00000427473 NOB1Q9ULX3 412 aaKnown RBP16.38■□□□□ 0.21
CTLA4-203ENST00000427473 GRIN3BO60391 1043 aa16.37■□□□□ 0.21
CTLA4-203ENST00000427473 BCAR3O75815 825 aa16.37■□□□□ 0.21
CTLA4-203ENST00000427473 RTL5Q5HYW3 569 aaPredicted RBP16.37■□□□□ 0.21
CTLA4-203ENST00000427473 SLC4A10Q6U841 1118 aa16.37■□□□□ 0.21
CTLA4-203ENST00000427473 CNKSR1Q969H4 720 aa16.37■□□□□ 0.21
CTLA4-203ENST00000427473 API5Q9BZZ5 524 aaKnown RBP16.37■□□□□ 0.21
CTLA4-203ENST00000427473 SRCIN1Q9C0H9 1055 aa16.37■□□□□ 0.21
CTLA4-203ENST00000427473 H7C1W4 665 aa16.36■□□□□ 0.21
CTLA4-203ENST00000427473 ALDH1L1O75891 902 aa16.36■□□□□ 0.21
CTLA4-203ENST00000427473 HSP90B1P14625 803 aaKnown RBP16.36■□□□□ 0.21
CTLA4-203ENST00000427473 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
CTLA4-203ENST00000427473 ARHGAP45Q92619 1136 aa16.36■□□□□ 0.21
CTLA4-203ENST00000427473 RPGRQ92834 1020 aaKnown RBP16.36■□□□□ 0.21
CTLA4-203ENST00000427473 CASP7P55210 303 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms