RNA–Protein interactions for RNA: ENST00000427445.6

TPTE-201, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-201ENST00000427445 RBM8AQ9Y5S9 174 aaKnown RBP11.77□□□□□ -0.53
TPTE-201ENST00000427445 NPHP3Q7Z494 1330 aa11.77□□□□□ -0.53
TPTE-201ENST00000427445 RBM10P98175 930 aaKnown RBP11.76□□□□□ -0.53
TPTE-201ENST00000427445 DNM1Q05193 864 aaKnown RBP11.76□□□□□ -0.53
TPTE-201ENST00000427445 RBM43Q6ZSC3 357 aaKnown RBP11.76□□□□□ -0.53
TPTE-201ENST00000427445 KIAA1524Q8TCG1 905 aa11.76□□□□□ -0.53
TPTE-201ENST00000427445 CCDC94Q9BW85 323 aaPredicted RBP11.76□□□□□ -0.53
TPTE-201ENST00000427445 NUP62CLQ9H1M0 184 aa11.76□□□□□ -0.53
TPTE-201ENST00000427445 SIPA1L3O60292 1781 aaPredicted RBP11.76□□□□□ -0.53
TPTE-201ENST00000427445 MED23Q9ULK4 1368 aa11.76□□□□□ -0.53
TPTE-201ENST00000427445 PTH1RQ03431 593 aa11.76□□□□□ -0.53
TPTE-201ENST00000427445 G3BP1Q13283 466 aaKnown RBP eCLIP11.76□□□□□ -0.53
TPTE-201ENST00000427445 LARP1BQ659C4 914 aaKnown RBP11.76□□□□□ -0.53
TPTE-201ENST00000427445 BLOC1S2Q6QNY1 142 aa11.76□□□□□ -0.53
TPTE-201ENST00000427445 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
TPTE-201ENST00000427445 KIF3AQ9Y496 699 aa11.76□□□□□ -0.53
TPTE-201ENST00000427445 COL15A1P39059 1388 aa11.75□□□□□ -0.53
TPTE-201ENST00000427445 LARGE1O95461 756 aa11.75□□□□□ -0.53
TPTE-201ENST00000427445 KCNJ4P48050 445 aa11.75□□□□□ -0.53
TPTE-201ENST00000427445 ME3Q16798 604 aa11.75□□□□□ -0.53
TPTE-201ENST00000427445 FOXD4L6Q3SYB3 417 aaPredicted RBP11.75□□□□□ -0.53
TPTE-201ENST00000427445 C1orf141Q5JVX7 400 aa11.75□□□□□ -0.53
TPTE-201ENST00000427445 ZNF530Q6P9A1 599 aaPredicted RBP11.75□□□□□ -0.53
TPTE-201ENST00000427445 FOXD4L3Q6VB84 417 aaPredicted RBP11.75□□□□□ -0.53
TPTE-201ENST00000427445 CHMP4CQ96CF2 233 aa11.75□□□□□ -0.53
TPTE-201ENST00000427445 SLIT3O75094 1523 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 VPS37CA5D8V6 355 aaPredicted RBP11.74□□□□□ -0.53
TPTE-201ENST00000427445 GRM8O00222 908 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 SLC27A2O14975 620 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 RNMTO43148 476 aaKnown RBP11.74□□□□□ -0.53
TPTE-201ENST00000427445 RPS6KB1P23443 525 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 SYCP1Q15431 976 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 GIMAP6Q6P9H5 292 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 AACSQ86V21 672 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 MAP3K2Q9Y2U5 619 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 FER1L4A9Z1Z3 1794 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 ADCK5Q3MIX3 580 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 NBPF6Q5VWK0 638 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 LTV1Q96GA3 475 aaPredicted RBP11.74□□□□□ -0.53
TPTE-201ENST00000427445 NBPF4Q96M43 638 aa11.74□□□□□ -0.53
TPTE-201ENST00000427445 DDX21Q9NR30 783 aaKnown RBP eCLIP11.74□□□□□ -0.53
TPTE-201ENST00000427445 ST3GAL1Q11201 340 aa11.73□□□□□ -0.53
TPTE-201ENST00000427445 USPL1Q5W0Q7 1092 aa11.73□□□□□ -0.53
TPTE-201ENST00000427445 ZSCAN16Q9H4T2 348 aaPredicted RBP11.73□□□□□ -0.53
TPTE-201ENST00000427445 TTC12Q9H892 705 aaPredicted RBP11.73□□□□□ -0.53
TPTE-201ENST00000427445 LGR6Q9HBX8 967 aa11.73□□□□□ -0.53
TPTE-201ENST00000427445 TPCN1Q9ULQ1 816 aa11.73□□□□□ -0.53
TPTE-201ENST00000427445 NPHP4O75161 1426 aaPredicted RBP11.73□□□□□ -0.53
TPTE-201ENST00000427445 ABCC6O95255 1503 aa11.73□□□□□ -0.53
TPTE-201ENST00000427445 GOLGA6L4A6NEF3 574 aa11.72□□□□□ -0.53
TPTE-201ENST00000427445 CDC25BP30305 580 aa11.72□□□□□ -0.53
TPTE-201ENST00000427445 TYRO3Q06418 890 aa11.72□□□□□ -0.53
TPTE-201ENST00000427445 NMIQ13287 307 aaPredicted RBP11.72□□□□□ -0.53
TPTE-201ENST00000427445 ATL3Q6DD88 541 aa11.72□□□□□ -0.53
TPTE-201ENST00000427445 TTC6Q86TZ1 520 aa11.72□□□□□ -0.53
TPTE-201ENST00000427445 CTAGE5O15320 804 aa11.72□□□□□ -0.53
TPTE-201ENST00000427445 LARP1Q6PKG0 1096 aaKnown RBP11.72□□□□□ -0.53
TPTE-201ENST00000427445 TDRD7Q8NHU6 1098 aaKnown RBP11.72□□□□□ -0.53
TPTE-201ENST00000427445 LLPHQ9BRT6 129 aaKnown RBP11.72□□□□□ -0.53
TPTE-201ENST00000427445 TNMDQ9H2S6 317 aa11.72□□□□□ -0.53
TPTE-201ENST00000427445 CLSTN2Q9H4D0 955 aa11.72□□□□□ -0.53
TPTE-201ENST00000427445 NEMFO60524 1076 aa11.71□□□□□ -0.53
TPTE-201ENST00000427445 KCNA6P17658 529 aa11.71□□□□□ -0.53
TPTE-201ENST00000427445 SPATA32Q96LK8 384 aa11.71□□□□□ -0.53
TPTE-201ENST00000427445 FSD1Q9BTV5 496 aa11.71□□□□□ -0.53
TPTE-201ENST00000427445 CFAP45Q9UL16 551 aa11.71□□□□□ -0.53
TPTE-201ENST00000427445 MRVI1Q9Y6F6 885 aa11.71□□□□□ -0.53
TPTE-201ENST00000427445 SASH1O94885 1247 aa11.7□□□□□ -0.54
TPTE-201ENST00000427445 HMGB1P09429 215 aaKnown RBP11.7□□□□□ -0.54
TPTE-201ENST00000427445 NEXNQ0ZGT2 675 aa11.7□□□□□ -0.54
TPTE-201ENST00000427445 UTP14CQ5TAP6 766 aaKnown RBP11.7□□□□□ -0.54
TPTE-201ENST00000427445 USHBP1Q8N6Y0 703 aa11.7□□□□□ -0.54
TPTE-201ENST00000427445 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
TPTE-201ENST00000427445 CTIFO43310 598 aaKnown RBP11.7□□□□□ -0.54
TPTE-201ENST00000427445 CPA1P15085 419 aa11.7□□□□□ -0.54
TPTE-201ENST00000427445 ATP5JP18859 108 aa11.7□□□□□ -0.54
TPTE-201ENST00000427445 CDC37L1Q7L3B6 337 aa11.7□□□□□ -0.54
TPTE-201ENST00000427445 EAF2Q96CJ1 260 aaPredicted RBP11.7□□□□□ -0.54
TPTE-201ENST00000427445 SUCLG2Q96I99 432 aa11.7□□□□□ -0.54
TPTE-201ENST00000427445 MST1RQ04912 1400 aa11.7□□□□□ -0.54
TPTE-201ENST00000427445 LEO1Q8WVC0 666 aaPredicted RBP11.69□□□□□ -0.54
TPTE-201ENST00000427445 GTF3C6Q969F1 213 aa11.69□□□□□ -0.54
TPTE-201ENST00000427445 ZNF830Q96NB3 372 aaPredicted RBP11.69□□□□□ -0.54
TPTE-201ENST00000427445 KCNF1Q9H3M0 494 aa11.69□□□□□ -0.54
TPTE-201ENST00000427445 COPRSQ9NQ92 184 aa11.69□□□□□ -0.54
TPTE-201ENST00000427445 RGPD2P0DJD1 1756 aa11.69□□□□□ -0.54
TPTE-201ENST00000427445 KCNQ3O43525 872 aa11.69□□□□□ -0.54
TPTE-201ENST00000427445 TOB2Q14106 344 aaPredicted RBP11.69□□□□□ -0.54
TPTE-201ENST00000427445 DHX8Q14562 1220 aaKnown RBP11.69□□□□□ -0.54
TPTE-201ENST00000427445 NUTM2GQ5VZR2 741 aa11.69□□□□□ -0.54
TPTE-201ENST00000427445 SARM1Q6SZW1 724 aa11.69□□□□□ -0.54
TPTE-201ENST00000427445 PLA2G4DQ86XP0 818 aa11.69□□□□□ -0.54
TPTE-201ENST00000427445 NECAB1Q8N987 351 aa11.69□□□□□ -0.54
TPTE-201ENST00000427445 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
TPTE-201ENST00000427445 BICC1Q9H694 974 aaKnown RBP11.69□□□□□ -0.54
TPTE-201ENST00000427445 A0A0D9SFI3 127 aa11.68□□□□□ -0.54
TPTE-201ENST00000427445 TAF5LO75529 589 aa11.68□□□□□ -0.54
TPTE-201ENST00000427445 ARHGEF25Q86VW2 580 aa11.68□□□□□ -0.54
TPTE-201ENST00000427445 ANKRD7Q92527 254 aa11.68□□□□□ -0.54
TPTE-201ENST00000427445 DACT1Q9NYF0 836 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms