RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MSANTD4Q8NCY6 345 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 STX6O43752 255 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 SYCP3Q8IZU3 236 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 CDCA7LQ96GN5 454 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 KRT83P78385 493 aa16.49■□□□□ 0.23
PTPN13-203ENST00000427191 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
PTPN13-203ENST00000427191 FAM114A2Q9NRY5 505 aa16.49■□□□□ 0.23
PTPN13-203ENST00000427191 TBCAO75347 108 aaKnown RBP16.49■□□□□ 0.23
PTPN13-203ENST00000427191 BCAR3O75815 825 aa16.49■□□□□ 0.23
PTPN13-203ENST00000427191 CNGA1P29973 690 aa16.49■□□□□ 0.23
PTPN13-203ENST00000427191 NLRP5P59047 1200 aa16.49■□□□□ 0.23
PTPN13-203ENST00000427191 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
PTPN13-203ENST00000427191 KCNG4Q8TDN1 519 aa16.49■□□□□ 0.23
PTPN13-203ENST00000427191 POGZQ7Z3K3 1410 aa16.49■□□□□ 0.23
PTPN13-203ENST00000427191 UBA7P41226 1012 aa16.49■□□□□ 0.23
PTPN13-203ENST00000427191 ZNF165P49910 485 aa16.49■□□□□ 0.23
PTPN13-203ENST00000427191 HS1BP3Q53T59 392 aa16.49■□□□□ 0.23
PTPN13-203ENST00000427191 EBAG9O00559 213 aa16.48■□□□□ 0.23
PTPN13-203ENST00000427191 SH3BGRP55822 239 aaPredicted RBP16.48■□□□□ 0.23
PTPN13-203ENST00000427191 KLHL40Q2TBA0 621 aa16.48■□□□□ 0.23
PTPN13-203ENST00000427191 DNAJC21Q5F1R6 531 aaKnown RBP16.48■□□□□ 0.23
PTPN13-203ENST00000427191 SPTY2D1Q68D10 685 aaPredicted RBP16.48■□□□□ 0.23
PTPN13-203ENST00000427191 HYPKQ9NX55 129 aa16.48■□□□□ 0.23
PTPN13-203ENST00000427191 NBPF7P0C2Y1 421 aaPredicted RBP16.48■□□□□ 0.23
PTPN13-203ENST00000427191 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
PTPN13-203ENST00000427191 GMNNO75496 209 aa16.48■□□□□ 0.23
PTPN13-203ENST00000427191 PRAM1Q96QH2 718 aa16.48■□□□□ 0.23
PTPN13-203ENST00000427191 GNG11P61952 73 aa16.48■□□□□ 0.23
PTPN13-203ENST00000427191 UTP14AQ9BVJ6 771 aaKnown RBP16.48■□□□□ 0.23
PTPN13-203ENST00000427191 CDK19Q9BWU1 502 aa16.48■□□□□ 0.23
PTPN13-203ENST00000427191 TACC1O75410 805 aa16.48■□□□□ 0.23
PTPN13-203ENST00000427191 CCDC96Q2M329 555 aa16.48■□□□□ 0.23
PTPN13-203ENST00000427191 GOLGA1Q92805 767 aa16.48■□□□□ 0.23
PTPN13-203ENST00000427191 ARID4AP29374 1257 aaPredicted RBP16.47■□□□□ 0.23
PTPN13-203ENST00000427191 PPM1FP49593 454 aaPredicted RBP16.47■□□□□ 0.23
PTPN13-203ENST00000427191 MRPS9P82933 396 aaKnown RBP16.47■□□□□ 0.23
PTPN13-203ENST00000427191 IFIT5Q13325 482 aaKnown RBP16.47■□□□□ 0.23
PTPN13-203ENST00000427191 IFT74Q96LB3 600 aa16.47■□□□□ 0.23
PTPN13-203ENST00000427191 SYNCQ9H7C4 482 aa16.47■□□□□ 0.23
PTPN13-203ENST00000427191 EPRSP07814 1512 aaKnown RBP16.47■□□□□ 0.23
PTPN13-203ENST00000427191 ERCC6LQ2NKX8 1250 aa16.47■□□□□ 0.23
PTPN13-203ENST00000427191 SETDB1Q15047 1291 aa16.47■□□□□ 0.23
PTPN13-203ENST00000427191 TMTC2Q8N394 836 aa16.47■□□□□ 0.23
PTPN13-203ENST00000427191 NSD2O96028 1365 aa16.47■□□□□ 0.23
PTPN13-203ENST00000427191 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
PTPN13-203ENST00000427191 GOLGA8AA7E2F4 631 aa16.47■□□□□ 0.23
PTPN13-203ENST00000427191 KRT86O43790 486 aa16.47■□□□□ 0.23
PTPN13-203ENST00000427191 AKR1B10O60218 316 aa16.46■□□□□ 0.23
PTPN13-203ENST00000427191 CPSF2Q9P2I0 782 aaKnown RBP16.46■□□□□ 0.23
PTPN13-203ENST00000427191 ABCF2Q9UG63 623 aa16.46■□□□□ 0.23
PTPN13-203ENST00000427191 BAG3O95817 575 aa16.46■□□□□ 0.23
PTPN13-203ENST00000427191 PRC1O43663 620 aa16.46■□□□□ 0.23
PTPN13-203ENST00000427191 TCERG1LQ5VWI1 586 aa16.46■□□□□ 0.23
PTPN13-203ENST00000427191 CCDC50Q8IVM0 306 aa16.46■□□□□ 0.23
PTPN13-203ENST00000427191 ZBTB16Q05516 673 aa16.46■□□□□ 0.23
PTPN13-203ENST00000427191 ODF2LQ9ULJ1 636 aa16.46■□□□□ 0.23
PTPN13-203ENST00000427191 MPNDQ8N594 471 aa16.45■□□□□ 0.22
PTPN13-203ENST00000427191 CCDC160A6NGH7 325 aa16.45■□□□□ 0.22
PTPN13-203ENST00000427191 B4GALNT4Q76KP1 1039 aa16.45■□□□□ 0.22
PTPN13-203ENST00000427191 SAMD15Q9P1V8 674 aa16.45■□□□□ 0.22
PTPN13-203ENST00000427191 NDC80O14777 642 aa16.45■□□□□ 0.22
PTPN13-203ENST00000427191 ZPR1O75312 459 aa16.45■□□□□ 0.22
PTPN13-203ENST00000427191 LDHCP07864 332 aa16.45■□□□□ 0.22
PTPN13-203ENST00000427191 IFIT3O14879 490 aaKnown RBP16.45■□□□□ 0.22
PTPN13-203ENST00000427191 IARSP41252 1262 aaKnown RBP16.45■□□□□ 0.22
PTPN13-203ENST00000427191 TRIM47Q96LD4 638 aa16.45■□□□□ 0.22
PTPN13-203ENST00000427191 MINDY4BA8MYZ0 360 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 MTRF1LQ9UGC7 380 aaKnown RBP16.44■□□□□ 0.22
PTPN13-203ENST00000427191 FAM184BQ9ULE4 1060 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 N4BP3O15049 544 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
PTPN13-203ENST00000427191 TUBB2AQ13885 445 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 TUBB2BQ9BVA1 445 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 BICDL2A1A5D9 508 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 GSTO1P78417 241 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 BMP2KLQ5H9B9 411 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 GABPB2Q8TAK5 448 aaPredicted RBP16.44■□□□□ 0.22
PTPN13-203ENST00000427191 HDAC9Q9UKV0 1011 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 KRT13P13646 458 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 TMEM57Q8N5G2 664 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 IMPG2Q9BZV3 1241 aa16.44■□□□□ 0.22
PTPN13-203ENST00000427191 XPCQ01831 940 aaPredicted RBP16.44■□□□□ 0.22
PTPN13-203ENST00000427191 SNX16P57768 344 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 TTC31Q49AM3 519 aaPredicted RBP16.43■□□□□ 0.22
PTPN13-203ENST00000427191 CROCCP2Q86T23 111 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 SPAG5Q96R06 1193 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 CLUL1Q15846 466 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 TNPO1Q92973 898 aaKnown RBP16.43■□□□□ 0.22
PTPN13-203ENST00000427191 ANKIB1Q9P2G1 1089 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 TIAM1Q13009 1591 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 UBASH3AP57075 661 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 KIF5AQ12840 1032 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 OTUD6BQ8N6M0 293 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 A0A1B0GUA9 196 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 PPFIBP2Q8ND30 876 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 CNNM2Q9H8M5 875 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 TRMT1Q9NXH9 659 aaKnown RBP16.43■□□□□ 0.22
PTPN13-203ENST00000427191 HLA-DOAP06340 250 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 BICDL1Q6ZP65 573 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms