RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 SDF4Q9BRK5 362 aa12.07□□□□□ -0.48
CTCFL-206ENST00000426658 KCNF1Q9H3M0 494 aa12.07□□□□□ -0.48
CTCFL-206ENST00000426658 CBX8Q9HC52 389 aa12.07□□□□□ -0.48
CTCFL-206ENST00000426658 MLH3Q9UHC1 1453 aa12.07□□□□□ -0.48
CTCFL-206ENST00000426658 KIDINS220Q9ULH0 1771 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 TAF7LQ5H9L4 462 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 STK11IPQ8N1F8 1099 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 LRRC2Q9BYS8 371 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 LSG1Q9H089 658 aaKnown RBP12.06□□□□□ -0.48
CTCFL-206ENST00000426658 DNAJC25Q9H1X3 360 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 CCDC66A2RUB6 948 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 LARGE1O95461 756 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 LIG1P18858 919 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 CCDC73Q6ZRK6 1079 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 USP44Q9H0E7 712 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 IL25Q9H293 177 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 HYPKQ9NX55 129 aa12.06□□□□□ -0.48
CTCFL-206ENST00000426658 TTC6Q86TZ1 520 aa12.05□□□□□ -0.48
CTCFL-206ENST00000426658 TOMM22Q9NS69 142 aa12.05□□□□□ -0.48
CTCFL-206ENST00000426658 ECHDC1Q9NTX5 307 aa12.05□□□□□ -0.48
CTCFL-206ENST00000426658 PIP4K2AP48426 406 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-206ENST00000426658 ZNF75DP51815 510 aa12.05□□□□□ -0.48
CTCFL-206ENST00000426658 CREBRFQ8IUR6 639 aa12.05□□□□□ -0.48
CTCFL-206ENST00000426658 HIP1O00291 1037 aa12.05□□□□□ -0.48
CTCFL-206ENST00000426658 RAPGEF4Q8WZA2 1011 aa12.05□□□□□ -0.48
CTCFL-206ENST00000426658 TTC14Q96N46 770 aa12.05□□□□□ -0.48
CTCFL-206ENST00000426658 DNAJC5Q9H3Z4 198 aa12.05□□□□□ -0.48
CTCFL-206ENST00000426658 TRMT1Q9NXH9 659 aaKnown RBP12.05□□□□□ -0.48
CTCFL-206ENST00000426658 RBM8AQ9Y5S9 174 aaKnown RBP12.05□□□□□ -0.48
CTCFL-206ENST00000426658 NBPF7P0C2Y1 421 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-206ENST00000426658 SSH3Q8TE77 659 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 NRBP1Q9UHY1 535 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 MRVI1Q9Y6F6 885 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 NPHP3Q7Z494 1330 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 ZSCAN25Q6NSZ9 544 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 CDC37L1Q7L3B6 337 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 ERC1Q8IUD2 1116 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 TTC5Q8N0Z6 440 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.04□□□□□ -0.48
CTCFL-206ENST00000426658 V9GYY5 206 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-206ENST00000426658 ME3Q16798 604 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 CWF19L2Q2TBE0 894 aaKnown RBP12.04□□□□□ -0.48
CTCFL-206ENST00000426658 HOMER1Q86YM7 354 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 CCAR2Q8N163 923 aaKnown RBP12.04□□□□□ -0.48
CTCFL-206ENST00000426658 CCDC85AQ96PX6 553 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-206ENST00000426658 MAP3K2Q9Y2U5 619 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 CDC42BPGQ6DT37 1551 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 SALL3Q9BXA9 1300 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 YEATS2Q9ULM3 1422 aa12.04□□□□□ -0.48
CTCFL-206ENST00000426658 KINO60870 393 aaKnown RBP12.03□□□□□ -0.48
CTCFL-206ENST00000426658 TOM1L2Q6ZVM7 507 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 KRT222Q8N1A0 295 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 ME1P48163 572 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 PTH1RQ03431 593 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 ADCK5Q3MIX3 580 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 ERICH4A6NGS2 130 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 CPLX1O14810 134 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 AP5Z1O43299 807 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 NCBP1Q09161 790 aaKnown RBP12.03□□□□□ -0.48
CTCFL-206ENST00000426658 WASHC4Q2M389 1173 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.03□□□□□ -0.48
CTCFL-206ENST00000426658 EVI5LQ96CN4 794 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 CFAP45Q9UL16 551 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 NEMFO60524 1076 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 CREB3L3Q68CJ9 461 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 KIF18AQ8NI77 898 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 ANKRD7Q92527 254 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 CCDC171Q6TFL3 1326 aa12.03□□□□□ -0.48
CTCFL-206ENST00000426658 HECW2Q9P2P5 1572 aa12.02□□□□□ -0.48
CTCFL-206ENST00000426658 TTC41PQ6P2S7 1318 aa12.02□□□□□ -0.48
CTCFL-206ENST00000426658 SKILP12757 684 aa12.02□□□□□ -0.48
CTCFL-206ENST00000426658 TPM4P67936 248 aa12.02□□□□□ -0.48
CTCFL-206ENST00000426658 PI4K2BQ8TCG2 481 aa12.02□□□□□ -0.48
CTCFL-206ENST00000426658 FUCA2Q9BTY2 467 aa12.02□□□□□ -0.48
CTCFL-206ENST00000426658 APPP05067 770 aa12.02□□□□□ -0.49
CTCFL-206ENST00000426658 GABPB1Q06547 395 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-206ENST00000426658 PLEKHO1Q53GL0 409 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-206ENST00000426658 KLHDC4Q8TBB5 520 aa12.02□□□□□ -0.49
CTCFL-206ENST00000426658 CLSTN2Q9H4D0 955 aa12.02□□□□□ -0.49
CTCFL-206ENST00000426658 SMC2O95347 1197 aa12.02□□□□□ -0.49
CTCFL-206ENST00000426658 CAVIN2O95810 425 aa12.02□□□□□ -0.49
CTCFL-206ENST00000426658 CCT2P78371 535 aaKnown RBP12.02□□□□□ -0.49
CTCFL-206ENST00000426658 LRRC59Q96AG4 307 aaKnown RBP12.02□□□□□ -0.49
CTCFL-206ENST00000426658 TM6SF1Q9BZW5 370 aa12.02□□□□□ -0.49
CTCFL-206ENST00000426658 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.49
CTCFL-206ENST00000426658 LARP1Q6PKG0 1096 aaKnown RBP12.01□□□□□ -0.49
CTCFL-206ENST00000426658 RAB11FIP4Q86YS3 637 aa12.01□□□□□ -0.49
CTCFL-206ENST00000426658 ZNF397Q8NF99 534 aaPredicted RBP12.01□□□□□ -0.49
CTCFL-206ENST00000426658 NAT10Q9H0A0 1025 aaKnown RBP12.01□□□□□ -0.49
CTCFL-206ENST00000426658 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
CTCFL-206ENST00000426658 RIMBP3CA6NJZ7 1639 aa12.01□□□□□ -0.49
CTCFL-206ENST00000426658 RIMBP3BA6NNM3 1639 aa12.01□□□□□ -0.49
CTCFL-206ENST00000426658 RIMBP3Q9UFD9 1639 aa12.01□□□□□ -0.49
CTCFL-206ENST00000426658 TPCN1Q9ULQ1 816 aa12.01□□□□□ -0.49
CTCFL-206ENST00000426658 LEO1Q8WVC0 666 aaPredicted RBP12.01□□□□□ -0.49
CTCFL-206ENST00000426658 NGLY1Q96IV0 654 aa12.01□□□□□ -0.49
CTCFL-206ENST00000426658 KNDC1Q76NI1 1749 aa12.01□□□□□ -0.49
CTCFL-206ENST00000426658 TULP1O00294 542 aaPredicted RBP12□□□□□ -0.49
CTCFL-206ENST00000426658 CTIFO43310 598 aaKnown RBP12□□□□□ -0.49
CTCFL-206ENST00000426658 NAA30Q147X3 362 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms