RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TBC1D2BQ9UPU7 963 aa19.03■□□□□ 0.64
PKP4-205ENST00000426248 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
PKP4-205ENST00000426248 CLASRPQ8N2M8 674 aaKnown RBP19.03■□□□□ 0.64
PKP4-205ENST00000426248 NEUROD6Q96NK8 337 aa19.03■□□□□ 0.64
PKP4-205ENST00000426248 ST18O60284 1047 aa19.03■□□□□ 0.64
PKP4-205ENST00000426248 GPATCH3Q96I76 525 aa19.03■□□□□ 0.64
PKP4-205ENST00000426248 TIGD1Q96MW7 591 aa19.03■□□□□ 0.64
PKP4-205ENST00000426248 ABCC4O15439 1325 aa19.03■□□□□ 0.64
PKP4-205ENST00000426248 PKP1Q13835 747 aa19.02■□□□□ 0.64
PKP4-205ENST00000426248 PIK3C2AO00443 1686 aa19.02■□□□□ 0.64
PKP4-205ENST00000426248 NBPF7P0C2Y1 421 aaPredicted RBP19.02■□□□□ 0.64
PKP4-205ENST00000426248 TSHZ3Q63HK5 1081 aa19.02■□□□□ 0.64
PKP4-205ENST00000426248 CEP85Q6P2H3 762 aa19.02■□□□□ 0.64
PKP4-205ENST00000426248 ANKRD44Q8N8A2 993 aa19.02■□□□□ 0.64
PKP4-205ENST00000426248 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.02■□□□□ 0.64
PKP4-205ENST00000426248 HSP90AB4PQ58FF6 505 aa19.02■□□□□ 0.64
PKP4-205ENST00000426248 NUTM1Q86Y26 1132 aa19.02■□□□□ 0.64
PKP4-205ENST00000426248 ZFP91Q96JP5 570 aaPredicted RBP19.02■□□□□ 0.64
PKP4-205ENST00000426248 C16orf71Q8IYS4 520 aaPredicted RBP19.02■□□□□ 0.63
PKP4-205ENST00000426248 ZNF710Q8N1W2 664 aa19.01■□□□□ 0.63
PKP4-205ENST00000426248 MAP4K4O95819 1239 aaPredicted RBP19.01■□□□□ 0.63
PKP4-205ENST00000426248 GDPD2Q9HCC8 539 aa19.01■□□□□ 0.63
PKP4-205ENST00000426248 PHF14O94880 888 aa19.01■□□□□ 0.63
PKP4-205ENST00000426248 AKAP12Q02952 1782 aa19■□□□□ 0.63
PKP4-205ENST00000426248 LINS1Q8NG48 757 aa19■□□□□ 0.63
PKP4-205ENST00000426248 TEX13AQ9BXU3 409 aaPredicted RBP19■□□□□ 0.63
PKP4-205ENST00000426248 GRM8O00222 908 aa19■□□□□ 0.63
PKP4-205ENST00000426248 RIOK3O14730 519 aaKnown RBP19■□□□□ 0.63
PKP4-205ENST00000426248 DNAJC2Q99543 621 aaKnown RBP19■□□□□ 0.63
PKP4-205ENST00000426248 LMBRD1Q9NUN5 540 aa19■□□□□ 0.63
PKP4-205ENST00000426248 TMEM63CQ9P1W3 806 aa19■□□□□ 0.63
PKP4-205ENST00000426248 SOS1Q07889 1333 aaPredicted RBP18.99■□□□□ 0.63
PKP4-205ENST00000426248 CDCA7Q9BWT1 371 aaPredicted RBP18.99■□□□□ 0.63
PKP4-205ENST00000426248 PIGBQ92521 554 aa18.99■□□□□ 0.63
PKP4-205ENST00000426248 ADCY5O95622 1261 aa18.98■□□□□ 0.63
PKP4-205ENST00000426248 MBD3O95983 291 aa18.98■□□□□ 0.63
PKP4-205ENST00000426248 KCNQ4P56696 695 aa18.98■□□□□ 0.63
PKP4-205ENST00000426248 ANKRD26Q9UPS8 1709 aa18.98■□□□□ 0.63
PKP4-205ENST00000426248 HSPA1LP34931 641 aa18.98■□□□□ 0.63
PKP4-205ENST00000426248 RBM25P49756 843 aaKnown RBP18.98■□□□□ 0.63
PKP4-205ENST00000426248 PA2G4Q9UQ80 394 aaKnown RBP18.98■□□□□ 0.63
PKP4-205ENST00000426248 USP44Q9H0E7 712 aa18.97■□□□□ 0.63
PKP4-205ENST00000426248 APPP05067 770 aa18.97■□□□□ 0.63
PKP4-205ENST00000426248 BRPF1P55201 1214 aaPredicted RBP18.97■□□□□ 0.63
PKP4-205ENST00000426248 IRX5P78411 483 aaPredicted RBP18.97■□□□□ 0.63
PKP4-205ENST00000426248 TTLL7Q6ZT98 887 aa18.97■□□□□ 0.63
PKP4-205ENST00000426248 ZGPATQ8N5A5 531 aaKnown RBP18.97■□□□□ 0.63
PKP4-205ENST00000426248 CPDO75976 1380 aa18.97■□□□□ 0.63
PKP4-205ENST00000426248 UNC5CLQ8IV45 518 aa18.97■□□□□ 0.63
PKP4-205ENST00000426248 PDLIM2Q96JY6 352 aa18.97■□□□□ 0.63
PKP4-205ENST00000426248 NUCB1Q02818 461 aa18.96■□□□□ 0.63
PKP4-205ENST00000426248 PNMA6EA0A0J9YXQ4 647 aa18.96■□□□□ 0.63
PKP4-205ENST00000426248 PIBF1Q8WXW3 757 aa18.96■□□□□ 0.63
PKP4-205ENST00000426248 C16orf45Q96MC5 204 aaPredicted RBP18.96■□□□□ 0.63
PKP4-205ENST00000426248 GOLGA6L6A8MZA4 724 aa18.95■□□□□ 0.62
PKP4-205ENST00000426248 TBC1D9Q6ZT07 1266 aa18.95■□□□□ 0.62
PKP4-205ENST00000426248 GPT2Q8TD30 523 aa18.95■□□□□ 0.62
PKP4-205ENST00000426248 CWC25Q9NXE8 425 aaPredicted RBP18.95■□□□□ 0.62
PKP4-205ENST00000426248 TRMT112Q9UI30 125 aaKnown RBP18.95■□□□□ 0.62
PKP4-205ENST00000426248 AACSQ86V21 672 aa18.95■□□□□ 0.62
PKP4-205ENST00000426248 MEGF6O75095 1541 aa18.95■□□□□ 0.62
PKP4-205ENST00000426248 ATP8B2P98198 1209 aa18.95■□□□□ 0.62
PKP4-205ENST00000426248 ALDH1L1O75891 902 aa18.94■□□□□ 0.62
PKP4-205ENST00000426248 CCDC57Q2TAC2 916 aa18.94■□□□□ 0.62
PKP4-205ENST00000426248 RABEP1Q15276 862 aa18.94■□□□□ 0.62
PKP4-205ENST00000426248 OGFRQ9NZT2 677 aa18.94■□□□□ 0.62
PKP4-205ENST00000426248 DCTPP1Q9H773 170 aa18.93■□□□□ 0.62
PKP4-205ENST00000426248 PXDNQ92626 1479 aa18.93■□□□□ 0.62
PKP4-205ENST00000426248 HCLS1P14317 486 aaPredicted RBP18.93■□□□□ 0.62
PKP4-205ENST00000426248 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.93■□□□□ 0.62
PKP4-205ENST00000426248 V9GYY5 206 aaPredicted RBP18.93■□□□□ 0.62
PKP4-205ENST00000426248 NRKQ7Z2Y5 1582 aa18.93■□□□□ 0.62
PKP4-205ENST00000426248 KLHDC4Q8TBB5 520 aa18.93■□□□□ 0.62
PKP4-205ENST00000426248 OTUD7AQ8TE49 926 aaPredicted RBP18.93■□□□□ 0.62
PKP4-205ENST00000426248 CCDC8Q9H0W5 538 aaPredicted RBP18.93■□□□□ 0.62
PKP4-205ENST00000426248 ANO2Q9NQ90 1003 aa18.93■□□□□ 0.62
PKP4-205ENST00000426248 PEAK1Q9H792 1746 aa18.92■□□□□ 0.62
PKP4-205ENST00000426248 KIF1BPQ96EK5 621 aa18.92■□□□□ 0.62
PKP4-205ENST00000426248 CALCOCO1Q9P1Z2 691 aa18.92■□□□□ 0.62
PKP4-205ENST00000426248 NSFL1CQ9UNZ2 370 aaKnown RBP18.92■□□□□ 0.62
PKP4-205ENST00000426248 CDC45O75419 566 aa18.92■□□□□ 0.62
PKP4-205ENST00000426248 LMBR1LQ6UX01 489 aa18.92■□□□□ 0.62
PKP4-205ENST00000426248 DZIP3Q86Y13 1208 aaKnown RBP18.92■□□□□ 0.62
PKP4-205ENST00000426248 BEND3Q5T5X7 828 aa18.92■□□□□ 0.62
PKP4-205ENST00000426248 CEMIPQ8WUJ3 1361 aa18.92■□□□□ 0.62
PKP4-205ENST00000426248 METTL22Q9BUU2 404 aaPredicted RBP18.92■□□□□ 0.62
PKP4-205ENST00000426248 TOPAZ1Q8N9V7 1692 aa18.91■□□□□ 0.62
PKP4-205ENST00000426248 TMX1Q9H3N1 280 aa18.91■□□□□ 0.62
PKP4-205ENST00000426248 BICC1Q9H694 974 aaKnown RBP18.91■□□□□ 0.62
PKP4-205ENST00000426248 QTRT2Q9H974 415 aaKnown RBP18.91■□□□□ 0.62
PKP4-205ENST00000426248 CCDC112Q8NEF3 446 aa18.91■□□□□ 0.62
PKP4-205ENST00000426248 CNNM1Q9NRU3 951 aa18.91■□□□□ 0.62
PKP4-205ENST00000426248 MX1P20591 662 aa18.9■□□□□ 0.62
PKP4-205ENST00000426248 SIRT2Q8IXJ6 389 aa18.9■□□□□ 0.62
PKP4-205ENST00000426248 PLBD2Q8NHP8 589 aa18.9■□□□□ 0.62
PKP4-205ENST00000426248 FAM89AQ96GI7 184 aa18.9■□□□□ 0.62
PKP4-205ENST00000426248 MCCP23508 829 aa18.9■□□□□ 0.62
PKP4-205ENST00000426248 FEZ1Q99689 392 aa18.9■□□□□ 0.62
PKP4-205ENST00000426248 NWD1Q149M9 1564 aa18.9■□□□□ 0.62
PKP4-205ENST00000426248 KIF1AQ12756 1690 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms